Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4TVZ
DownloadVisualize
BU of 4tvz by Molmil
Crystal Structure of SCARB2 in Neural Condition (pH7.5)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Scavenger receptor class B member 2, ...
著者Dang, M.H, Wang, X.X, Rao, Z.H.
登録日2014-06-29
公開日2015-07-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.006 Å)
主引用文献Molecular mechanism of SCARB2-mediated attachment and uncoating of EV71
Protein Cell, 5, 2014
4V4G
DownloadVisualize
BU of 4v4g by Molmil
Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
分子名称: 16S ribosomal RNA, 23S RIBOSOMAL RNA, 30S ribosomal protein S10, ...
著者Vila-Sanjurjo, A, Schuwirth, B.S, Hau, C.W, Cate, J.H.
登録日2004-10-06
公開日2014-07-09
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (11.5 Å)
主引用文献Structural basis for the control of translation initiation during stress.
Nat.Struct.Mol.Biol., 11, 2004
2HLI
DownloadVisualize
BU of 2hli by Molmil
Solution structure of Crotonaldehyde-Derived N2-[3-Oxo-1(S)-methyl-propyl]-dG DNA Adduct in the 5'-CpG-3' Sequence
分子名称: DNA dodecamer, DNA dodecamer with S-crotonaldehyde adduct
著者Cho, Y.-J, Wang, H, Kozekov, I.D, Kurtz, A.J, Jacob, J, Voehler, M, Smith, J, Harris, T.M, Rizzo, C.J, Stone, M.P.
登録日2006-07-07
公開日2006-09-19
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Orientation of the Crotonaldehyde-Derived N(2)-[3-Oxo-1(S)-methyl-propyl]-dG DNA Adduct Hinders Interstrand Cross-Link Formation in the 5'-CpG-3' Sequence
Chem.Res.Toxicol., 19, 2006
2RF6
DownloadVisualize
BU of 2rf6 by Molmil
Crystal Structure of the Vaccinia Virus Dual-Specificity Phosphatase VH1
分子名称: Dual specificity protein phosphatase, SULFATE ION
著者Koksal, A.C, Cingolani, G.
登録日2007-09-28
公開日2008-09-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of the Vaccinia Virus Dual-Specificity Phosphatase VH1
To be Published
7NVG
DownloadVisualize
BU of 7nvg by Molmil
Salmonella flagellar basal body refined in C1 map
分子名称: Basal-body rod modification protein FlgD, Flagellar L-ring protein, Flagellar M-ring protein, ...
著者Johnson, S, Furlong, E, Lea, S.M.
登録日2021-03-15
公開日2021-05-05
最終更新日2021-07-14
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Molecular structure of the intact bacterial flagellar basal body.
Nat Microbiol, 6, 2021
5D6D
DownloadVisualize
BU of 5d6d by Molmil
Crystal structure of GASDALIE IgG1 Fc in complex with FcgRIIIa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-1 chain C region, Low affinity immunoglobulin gamma Fc region receptor III-A, ...
著者Ahmed, A.A, Bjorkman, P.J.
登録日2015-08-12
公開日2016-02-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献Structural characterization of GASDALIE Fc bound to the activating Fc receptor Fc gamma RIIIa.
J.Struct.Biol., 194, 2016
6WCR
DownloadVisualize
BU of 6wcr by Molmil
Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with small molecule F0045(S)
分子名称: (2,4-dichlorophenyl)[(2S)-2-phenylmorpholin-4-yl]methanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者kadam, R.U, Wilson, I.A.
登録日2020-03-31
公開日2020-08-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献An influenza A hemagglutinin small-molecule fusion inhibitor identified by a new high-throughput fluorescence polarization screen.
Proc.Natl.Acad.Sci.USA, 117, 2020
5D9Q
DownloadVisualize
BU of 5d9q by Molmil
Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122 and scFv NIH45-46
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Julien, J.-P, Stanfield, R.L, Ward, A.B, Wilson, I.A.
登録日2015-08-18
公開日2016-08-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (4.4 Å)
主引用文献Minimally Mutated HIV-1 Broadly Neutralizing Antibodies to Guide Reductionist Vaccine Design.
Plos Pathog., 12, 2016
3SLA
DownloadVisualize
BU of 3sla by Molmil
X-ray structure of first four repeats of human beta-catenin
分子名称: Catenin beta-1, GLYCEROL, SODIUM ION
著者Gupta, D, Bienz, M.
登録日2011-06-24
公開日2012-02-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An intrinsically labile alpha-helix abutting the BCL9-binding site of beta-catenin is required for its inhibition by carnosic acid.
Nat Commun, 3, 2012
3SL9
DownloadVisualize
BU of 3sl9 by Molmil
X-ray structure of Beta catenin in complex with Bcl9
分子名称: 1,2-ETHANEDIOL, B-cell CLL/lymphoma 9 protein, Catenin beta-1, ...
著者Gupta, D, Bienz, M.
登録日2011-06-24
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献An intrinsically labile alpha-helix abutting the BCL9-binding site of beta-catenin is required for its inhibition by carnosic acid.
Nat Commun, 3, 2012
8GHK
DownloadVisualize
BU of 8ghk by Molmil
CryoEM structure of Influenza A virus A/Melbourner/1/1946 (H1N1) hemagglutinin bound to GS10-X6-BE4 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GS10-X6-BE4 Fab Heavy chain, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2023-03-10
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural basis for the broad antigenicity of the computationally optimized influenza hemagglutinin X6.
Structure, 2024
8HIF
DownloadVisualize
BU of 8hif by Molmil
One asymmetric unit of Singapore grouper iridovirus capsid
分子名称: Major capsid protein, Penton protein (VP14), VP137, ...
著者Zhao, Z.N, Liu, C.C, Zhu, D.J, Qi, J.X, Zhang, X.Z, Gao, G.F.
登録日2022-11-20
公開日2023-04-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Near-atomic architecture of Singapore grouper iridovirus and implications for giant virus assembly.
Nat Commun, 14, 2023
5LWB
DownloadVisualize
BU of 5lwb by Molmil
Crystal structure of human JARID1B in complex with S40650a
分子名称: 1,2-ETHANEDIOL, 5-[1-[2-(dimethylamino)ethyl]pyrazol-4-yl]-7-oxidanylidene-6-propan-2-yl-6~{H}-pyrazolo[1,5-a]pyrimidine-3-carbonitrile, DIMETHYL SULFOXIDE, ...
著者Srikannathasan, V, Le Bihan, Y.V, Szykowska, A, Johansson, C, Gileadi, C, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Oppermann, U, Huber, K.
登録日2016-09-15
公開日2016-10-26
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Crystal structure of human JARID1B in complex with S40650a
to be published
8FQC
DownloadVisualize
BU of 8fqc by Molmil
Structure of baseplate with receptor binding complex of Agrobacterium phage Milano
分子名称: Baseplate Centerpiece, gp25, Baseplate Central Spike, ...
著者Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
登録日2023-01-05
公開日2024-01-31
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
8IDQ
DownloadVisualize
BU of 8idq by Molmil
Crystal structure of reducing-end xylose-releasing exoxylanase in GH30 from Talaromyces cellulolyticus with xylose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Nakamichi, Y, Watanabe, M, Fujii, T, Inoue, H, Morita, T.
登録日2023-02-14
公開日2023-05-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of reducing-end xylose-releasing exoxylanase in subfamily 7 of glycoside hydrolase family 30.
Proteins, 91, 2023
8IDP
DownloadVisualize
BU of 8idp by Molmil
Crystal structure of reducing-end xylose-releasing exoxylanase in GH30 from Talaromyces cellulolyticus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Nakamichi, Y, Watanabe, M, Fujii, T, Inoue, H, Morita, T.
登録日2023-02-14
公開日2023-05-17
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of reducing-end xylose-releasing exoxylanase in subfamily 7 of glycoside hydrolase family 30.
Proteins, 91, 2023
6UR5
DownloadVisualize
BU of 6ur5 by Molmil
Resurfaced influenza hemagglutinin in complex with a broadly neutralizing antibody
分子名称: Antibody heavy chain, Antibody light chain, GLYCEROL, ...
著者Bajic, G, Schmidt, A.G.
登録日2019-10-22
公開日2020-06-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structure-Guided Molecular Grafting of a Complex Broadly Neutralizing Viral Epitope.
Acs Infect Dis., 6, 2020
5COD
DownloadVisualize
BU of 5cod by Molmil
Bovine heart complex I membrane domain
分子名称: NADH-ubiquinone oxidoreductase chain 4, NADH-ubiquinone oxidoreductase chain 5, SDAP, ...
著者Zhu, J, Hirst, J, King, M.S, Yu, M, Leslie, A.G.W, Klipcan, L.
登録日2015-07-20
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (6.74 Å)
主引用文献Structure of subcomplex I beta of mammalian respiratory complex I leads to new supernumerary subunit assignments.
Proc.Natl.Acad.Sci.USA, 112, 2015
5CW7
DownloadVisualize
BU of 5cw7 by Molmil
Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
分子名称: GLYCEROL, PAAA2, Plasmid stabilization protein ParE
著者Sterckx, Y.G.-J, Loris, R.
登録日2015-07-27
公開日2016-06-01
実験手法X-RAY DIFFRACTION (2.827 Å)
主引用文献A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016
5CZE
DownloadVisualize
BU of 5cze by Molmil
Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
分子名称: PaaA2, Plasmid stabilization protein ParE
著者Loris, R, Sterckx, Y.G.J.
登録日2015-07-31
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.82 Å)
主引用文献A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016
2LBI
DownloadVisualize
BU of 2lbi by Molmil
N2-dG:N2-dG interstrand cross-link induced by trans-4-hydroxynonenal
分子名称: (4S)-nonane-1,4-diol, DNA (5'-D(*GP*CP*TP*AP*GP*CP*GP*AP*GP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*CP*TP*CP*GP*CP*TP*AP*GP*C)-3')
著者Huang, H, Kozekov, I.D, Wang, H, Kozekova, A, Rizzo, C.J, Stone, M.P.
登録日2011-03-31
公開日2012-04-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Formation of a N2-dG:N2-dG carbinolamine DNA cross-link by the trans-4-hydroxynonenal-derived (6S,8R,11S) 1,N2-dG adduct.
J.Am.Chem.Soc., 133, 2011
3J3Q
DownloadVisualize
BU of 3j3q by Molmil
Atomic-level structure of the entire HIV-1 capsid
分子名称: capsid protein
著者Perilla, J.R, Zhao, G, Zhang, P, Schulten, K.J.
登録日2013-04-12
公開日2013-05-29
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY
主引用文献Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
5FUU
DownloadVisualize
BU of 5fuu by Molmil
Ectodomain of cleaved wild type JR-FL EnvdCT trimer in complex with PGT151 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Lee, J.H, Ward, A.B.
登録日2016-01-29
公開日2016-03-09
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-Em Structure of a Native, Fully Glycosylated and Cleaved HIV-1 Envelope Trimer
Science, 351, 2016
2NC1
DownloadVisualize
BU of 2nc1 by Molmil
Solution structure of the delta-J-delta-K domain of EMCV IRES
分子名称: IRES RNA (67-MER)
著者Imai, S, D'Souza, V, Wagner, G.
登録日2016-03-16
公開日2016-08-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation.
Nat. Struct. Mol. Biol., 23, 2016
7Y7A
DownloadVisualize
BU of 7y7a by Molmil
In situ double-PBS-PSII-PSI-LHCs megacomplex from Porphyridium purpureum.
分子名称: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol, (2S)-2,3-dihydroxypropyl octadecanoate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者You, X, Zhang, X, Cheng, J, Xiao, Y.N, Sun, S, Sui, S.F.
登録日2022-06-22
公開日2023-02-08
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
Nature, 616, 2023

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon