PDB: 1515 件ウェブページステータス検索Chemie searchBIRD

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1LM8	Structure of a HIF-1a-pVHL-ElonginB-ElonginC Complex 分子名称: ELONGIN B, ELONGIN C, Hypoxia-inducible factor 1 alpha, ... 著者 Min, J.-H, Yang, H, Ivan, M, Gertler, F, Kaelin JR, W.G, Pavletich, N.P. 登録日 2002-04-30 公開日 2002-06-12 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure of an HIF-1alpha -pVHL complex: hydroxyproline recognition in signaling. Science, 296, 2002
7CJB	VHL recognizes hydroxyproline in RIPK1 分子名称: Elongin-B, Elongin-C, GLYCEROL, ... 著者 Liu, J, Wang, Y, Pan, L. 登録日 2020-07-09 公開日 2021-07-14 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 VHL recognizes hydroxyproline in RIPK1 To Be Published
4F8C	Structure of the Cif:Nedd8 complex - Yersinia pseudotuberculosis Cycle Inhibiting Factor in complex with human Nedd8 分子名称: 1,2-ETHANEDIOL, Cycle Inhibiting Factor, NEDD8 著者 Crow, A, Banfield, M. 登録日 2012-05-17 公開日 2012-06-20 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 The molecular basis of Nedd8 deamidation by the bacterial effector protein Cif Proc.Natl.Acad.Sci.USA, 2012
1R4M	APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex 分子名称: Ubiquitin-like protein NEDD8, ZINC ION, amyloid beta precursor protein-binding protein 1, ... 著者 Walden, H, Podgorski, M.S, Holton, J.M, Schulman, B.A. 登録日 2003-10-07 公開日 2003-12-23 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1. Mol.Cell, 12, 2003
4FBJ	Structure of the Cif:Nedd8 complex - Photorhabdus luminescens Cycle Inhibiting Factor in complex with human Nedd8 分子名称: CHLORIDE ION, Hypothetical protein, NEDD8 著者 Crow, A, Banfield, M.J. 登録日 2012-05-23 公開日 2012-06-20 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 The molecular basis of Nedd8 deamidation by the bacterial effector protein Cif Proc.Natl.Acad.Sci.USA, 2012
1S1Q	TSG101(UEV) domain in complex with Ubiquitin 分子名称: ACETIC ACID, COPPER (II) ION, SULFATE ION, ... 著者 Sundquist, W.I, Schubert, H.L, Kelly, B.N, Hill, G.C, Holton, J.M, Hill, C.P. 登録日 2004-01-07 公開日 2004-05-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Ubiquitin recognition by the human TSG101 protein Mol.Cell, 13, 2004
7DNJ	K63-polyUb MDA5CARDs complex 分子名称: Interferon-induced helicase C domain-containing protein 1, Ubiquitin 著者 Song, B, Chen, Y, Luo, D.H, Zheng, J. 登録日 2020-12-09 公開日 2021-10-13 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Ordered assembly of the cytosolic RNA-sensing MDA5-MAVS signaling complex via binding to unanchored K63-linked poly-ubiquitin chains. Immunity, 54, 2021
7DNI	MDA5 CARDs-MAVS CARD polyUb complex 分子名称: Interferon-induced helicase C domain-containing protein 1, Mitochondrial antiviral-signaling protein, Ubiquitin 著者 Song, B, Chen, Y, Luo, D.H, Zheng, J. 登録日 2020-12-09 公開日 2021-10-13 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Ordered assembly of the cytosolic RNA-sensing MDA5-MAVS signaling complex via binding to unanchored K63-linked poly-ubiquitin chains. Immunity, 54, 2021
4FN2	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ37 分子名称: Ubiquitin-like protein SMT3, Peptidyl-prolyl cis-trans isomerase, ethyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-06-19 公開日 2012-08-01 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
1P9D	High-resolution structure of the complex of HHR23A ubiquitin-like domain and the C-terminal ubiquitin-interacting motif of proteasome subunit S5a 分子名称: 26S proteasome non-ATPase regulatory subunit 4, UV excision repair protein RAD23 homolog A 著者 Mueller, T.D, Feigon, J. 登録日 2003-05-10 公開日 2003-10-07 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural determinants for the binding of ubiquitin-like domains to the proteasome. Embo J., 22, 2003
1OTR	Solution Structure of a CUE-Ubiquitin Complex 分子名称: Ubiquitin, protein Cue2 著者 Kang, R.S, Daniels, C.M, Salerno, W.J, Radhakrishnan, I. 登録日 2003-03-22 公開日 2003-06-24 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of a CUE-Ubiquitin Complex Reveals a Conserved Mode of Ubiquitin Binding Cell(Cambridge,Mass.), 113, 2003
4HCN	Crystal structure of Burkholderia pseudomallei effector protein CHBP in complex with ubiquitin 分子名称: DI(HYDROXYETHYL)ETHER, FORMIC ACID, PHOSPHATE ION, ... 著者 Yao, Q, Cui, J, Zhu, Y, Shao, F. 登録日 2012-09-30 公開日 2012-11-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural mechanism of ubiquitin and NEDD8 deamidation catalyzed by bacterial effectors that induce macrophage-specific apoptosis. Proc.Natl.Acad.Sci.USA, 109, 2012
4HCP	crystal structure of Burkholderia pseudomallei effector protein chbp in complex with nedd8 分子名称: GLYCEROL, NEDD8, Putative ATP/GTP binding protein, ... 著者 Yao, Q, Shao, F. 登録日 2012-10-01 公開日 2012-11-21 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Structural mechanism of ubiquitin and NEDD8 deamidation catalyzed by bacterial effectors that induce macrophage-specific apoptosis. Proc.Natl.Acad.Sci.USA, 109, 2012
1R4N	APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ubiquitin-like protein NEDD8, ZINC ION, ... 著者 Walden, H, Podgorski, M.S, Holton, J.M, Schulman, B.A. 登録日 2003-10-07 公開日 2003-12-23 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1. Mol.Cell, 12, 2003
1UEL	Solution structure of ubiquitin-like domain of hHR23B complexed with ubiquitin-interacting motif of proteasome subunit S5a 分子名称: 26S proteasome non-ATPase regulatory subunit 4, UV excision repair protein RAD23 homolog B 著者 Fujiwara, K, Tenno, T, Jee, J.G, Sugasawa, K, Ohki, I, Kojima, C, Tochio, H, Hiroaki, H, Hanaoka, H, Shirakawa, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-05-19 公開日 2004-02-10 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structure of the Ubiquitin-interacting Motif of S5a Bound to the Ubiquitin-like Domain of HR23B J.Biol.Chem., 279, 2004
4FJV	Crystal Structure of Human Otubain2 and Ubiquitin Complex 分子名称: ETHANAMINE, GLYCEROL, Polyubiquitin-C, ... 著者 Altun, M, Walter, T.S, Kramer, H.B, Iphofer, A, David, Y, Komsany, A, Ternette, N, Nicholson, B, Navon, A, Stuart, D.I, Ren, J, Kessler, B.M. 登録日 2012-06-12 公開日 2013-06-12 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.047 Å) 主引用文献 The human otubain2-ubiquitin structure provides insights into the cleavage specificity of poly-ubiquitin-linkages. Plos One, 10, 2015
1P3Q	Mechanism of Ubiquitin Recognition by the CUE Domain of VPS9 分子名称: Ubiquitin, Vacuolar protein sorting-associated protein VPS9 著者 Prag, G, Misra, S, Jones, E.A, Ghirlando, R, Davies, B.A, Horazdovsky, B.F, Hurley, J.H. 登録日 2003-04-18 公開日 2003-06-24 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Mechanism of Ubiquitin Recognition by the CUE Domain of Vps9p. Cell(Cambridge,Mass.), 113, 2003
1NBF	Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde 分子名称: Ubiquitin aldehyde, Ubiquitin carboxyl-terminal hydrolase 7 著者 Hu, M, Li, P, Li, M, Li, W, Yao, T, Wu, J.-W, Gu, W, Cohen, R.E, Shi, Y. 登録日 2002-12-02 公開日 2003-01-07 最終更新日 2018-10-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of a UBP-family deubiquitinating enzyme in isolation and in complex with ubiquitin aldehyde Cell(Cambridge,Mass.), 111, 2002
4GGQ	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with CJ40 分子名称: 3-(3,4,5-trimethoxyphenyl)propyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-08-07 公開日 2012-08-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
4GIV	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ183 分子名称: 3-(pyridin-3-yl)propyl (2S)-1-[(3-nitrophenyl)sulfonyl]piperidine-2-carboxylate, FORMIC ACID, Ubiquitin-like protein SMT3, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-08-09 公開日 2012-09-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
1UZX	A complex of the Vps23 UEV with ubiquitin 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION, UBIQUITIN, ... 著者 Teo, H, Williams, R.L. 登録日 2004-03-18 公開日 2004-03-30 最終更新日 2017-07-05 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural Insights Into Endosomal Sorting Complex Required for Transport (Escrt-I) Recognition of Ubiquitinated Proteins J.Biol.Chem., 279, 2004
4G50	Crystal structure of a SMT fusion Peptidyl-prolyl cis-trans isomerase with surface mutation D44G from Burkholderia pseudomallei complexed with CJ168 分子名称: 1,2-ETHANEDIOL, 3-(3,4,5-trimethoxyphenyl)propyl (2S)-1-(benzylsulfonyl)piperidine-2-carboxylate, FORMIC ACID, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-07-17 公開日 2012-08-01 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 A structural biology approach enables the development of antimicrobials targeting bacterial immunophilins. Antimicrob.Agents Chemother., 58, 2014
1OQY	Structure of the DNA repair protein hHR23a 分子名称: UV excision repair protein RAD23 homolog A 著者 Walters, K.J, Lech, P.J, Goh, A.M, Wang, Q, Howley, P.M. 登録日 2003-03-11 公開日 2003-10-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 DNA-repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a Proc.Natl.Acad.Sci.USA, 100, 2003
1Q0W	Solution structure of Vps27 amino-terminal UIM-ubiquitin complex 分子名称: Ubiquitin, Vacuolar protein sorting-associated protein VPS27 著者 Swanson, K.A, Kang, R.S, Stamenova, S.D, Hicke, L, Radhakrishnan, I. 登録日 2003-07-17 公開日 2003-10-07 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution Structure of Vps27 UIM-Ubiquitin Complex Important for Endosomal Sorting and Receptor Downregulation Embo J., 22, 2003
4HXD	Diversity of ubiquitin and ISG15 specificity amongst nairoviruses viral ovarian tumor domain proteases 分子名称: 1.7.6 3-bromanylpropan-1-amine, Polyubiquitin-C, RNA-directed RNA polymerase L, ... 著者 Capodagli, G.C, Pegan, S.D. 登録日 2012-11-09 公開日 2013-02-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Diversity of Ubiquitin and ISG15 Specificity among Nairoviruses' Viral Ovarian Tumor Domain Proteases. J.Virol., 87, 2013

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