PDB: 2037 件ウェブページステータス検索Chemie searchBIRD

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2NC1	Solution structure of the delta-J-delta-K domain of EMCV IRES 分子名称: IRES RNA (67-MER) 著者 Imai, S, D'Souza, V, Wagner, G. 登録日 2016-03-16 公開日 2016-08-10 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation. Nat. Struct. Mol. Biol., 23, 2016
7QCL	Structure of the MUCIN-2 Cterminal domains 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Mucin-2, ... 著者 Gallego, P, Hansson, G.C. 登録日 2021-11-24 公開日 2023-03-08 最終更新日 2023-09-27 実験手法 ELECTRON MICROSCOPY (3.36 Å) 主引用文献 The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins. Nat Commun, 14, 2023
5LWB	Crystal structure of human JARID1B in complex with S40650a 分子名称: 1,2-ETHANEDIOL, 5-[1-[2-(dimethylamino)ethyl]pyrazol-4-yl]-7-oxidanylidene-6-propan-2-yl-6~{H}-pyrazolo[1,5-a]pyrimidine-3-carbonitrile, DIMETHYL SULFOXIDE, ... 著者 Srikannathasan, V, Le Bihan, Y.V, Szykowska, A, Johansson, C, Gileadi, C, Arrowsmith, C.H, Edwards, A.M, Bountra, C, von Delft, F, Oppermann, U, Huber, K. 登録日 2016-09-15 公開日 2016-10-26 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Crystal structure of human JARID1B in complex with S40650a to be published
7E30	Crystal structure of a novel alpha/beta hydrolase in apo form in complex with citrate 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CITRIC ACID, SULFATE ION, ... 著者 Gao, J, Han, X, Zheng, Y.Y, Liu, W.D. 登録日 2021-02-07 公開日 2022-02-09 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase. Acs Catalysis, 12, 2022
7E31	Crystal structure of a novel alpha/beta hydrolase mutant in apo form 分子名称: TRIETHYLENE GLYCOL, alpha/beta hydrolase 著者 Gao, J, Han, X, Zheng, Y.Y, Liu, W.D. 登録日 2021-02-07 公開日 2022-02-09 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Multiple Substrate Binding Mode-Guided Engineering of a Thermophilic PET Hydrolase. Acs Catalysis, 12, 2022
3SLA	X-ray structure of first four repeats of human beta-catenin 分子名称: Catenin beta-1, GLYCEROL, SODIUM ION 著者 Gupta, D, Bienz, M. 登録日 2011-06-24 公開日 2012-02-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 An intrinsically labile alpha-helix abutting the BCL9-binding site of beta-catenin is required for its inhibition by carnosic acid. Nat Commun, 3, 2012
3SL9	X-ray structure of Beta catenin in complex with Bcl9 分子名称: 1,2-ETHANEDIOL, B-cell CLL/lymphoma 9 protein, Catenin beta-1, ... 著者 Gupta, D, Bienz, M. 登録日 2011-06-24 公開日 2012-02-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 An intrinsically labile alpha-helix abutting the BCL9-binding site of beta-catenin is required for its inhibition by carnosic acid. Nat Commun, 3, 2012
6EKC	Crystal structure of the BSD2 homolog of Arabidopsis thaliana bound to the octameric assembly of RbcL from Thermosynechococcus elongatus 分子名称: DnaJ/Hsp40 cysteine-rich domain superfamily protein, Ribulose bisphosphate carboxylase large chain, ZINC ION 著者 Aigner, H, Wilson, R.H, Bracher, A, Calisse, L, Bhat, J.Y, Hartl, F.U, Hayer-Hartl, M. 登録日 2017-09-26 公開日 2017-12-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.63 Å) 主引用文献 Plant RuBisCo assembly in E. coli with five chloroplast chaperones including BSD2. Science, 358, 2017
3QHZ	Crystal Structure of human anti-influenza Fab 2D1 分子名称: Human monoclonal antibody del2D1, Fab Heavy Chain, Fab Light Chain 著者 Ekiert, D.C, Wilson, I.A. 登録日 2011-01-26 公開日 2011-02-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 An insertion mutation that distorts antibody binding site architecture enhances function of a human antibody. MBio, 2, 2011
3QHF	Crystal Structure of Fab del2D1, a deletion variant of anti-influenza antibody 2D1 分子名称: Human monoclonal antibody del2D1, Fab Heavy Chain, Fab Light Chain 著者 Ekiert, D.C, Wilson, I.A. 登録日 2011-01-25 公開日 2011-02-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.655 Å) 主引用文献 An insertion mutation that distorts antibody binding site architecture enhances function of a human antibody. MBio, 2, 2011
8EK6	UCA Y35N (unbound) Fab from CH65-CH67 lineage 分子名称: UCA Fab heavy chain, UCA Fab light chain 著者 Maurer, D.P, Schmidt, A.G. 登録日 2022-09-20 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.954 Å) 主引用文献 Hierarchical sequence-affinity landscapes shape the evolution of breadth in an anti-influenza receptor binding site antibody. Elife, 12, 2023
8EKH	I-2 Y35N H35N (unbound) Fab from CH65-CH67 lineage 分子名称: I-2 Fab heavy chain, I-2 Fab light chain 著者 Maurer, D.P, Schmidt, A.G. 登録日 2022-09-21 公開日 2023-01-25 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Hierarchical sequence-affinity landscapes shape the evolution of breadth in an anti-influenza receptor binding site antibody. Elife, 12, 2023
8F38	Cryo-EM structure of X6 COBRA (H1N1) hemagglutinin bound to CR6261 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CR6261 Fab heavy chain, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2022-11-09 公開日 2023-12-13 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.64 Å) 主引用文献 Structural basis for the broad antigenicity of the computationally optimized influenza hemagglutinin X6. Structure, 2024
4PY5	Thermovibrio ammonificans RNase H3 in complex with 19-mer RNA/DNA 分子名称: 5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*GP*CP*AP*CP*TP*C)-3', 5'-R(*GP*AP*GP*UP*GP*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3', GLYCEROL, ... 著者 Figiel, M, Nowotny, M. 登録日 2014-03-26 公開日 2014-07-30 最終更新日 2014-10-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure of RNase H3-substrate complex reveals parallel evolution of RNA/DNA hybrid recognition. Nucleic Acids Res., 42, 2014
8FQC	Structure of baseplate with receptor binding complex of Agrobacterium phage Milano 分子名称: Baseplate Centerpiece, gp25, Baseplate Central Spike, ... 著者 Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H. 登録日 2023-01-05 公開日 2024-01-31 最終更新日 2024-02-07 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano. Nat Commun, 15, 2024
5FUU	Ectodomain of cleaved wild type JR-FL EnvdCT trimer in complex with PGT151 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Lee, J.H, Ward, A.B. 登録日 2016-01-29 公開日 2016-03-09 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-Em Structure of a Native, Fully Glycosylated and Cleaved HIV-1 Envelope Trimer Science, 351, 2016
6UR5	Resurfaced influenza hemagglutinin in complex with a broadly neutralizing antibody 分子名称: Antibody heavy chain, Antibody light chain, GLYCEROL, ... 著者 Bajic, G, Schmidt, A.G. 登録日 2019-10-22 公開日 2020-06-10 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Structure-Guided Molecular Grafting of a Complex Broadly Neutralizing Viral Epitope. Acs Infect Dis., 6, 2020
6OLP	Full length HIV-1 Env AMC011 in complex with PGT151 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Rantalainen, K, Cottrell, C.A. 登録日 2019-04-16 公開日 2019-07-31 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Similarities and differences between native HIV-1 envelope glycoprotein trimers and stabilized soluble trimer mimetics. Plos Pathog., 15, 2019
6WCR	Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with small molecule F0045(S) 分子名称: (2,4-dichlorophenyl)[(2S)-2-phenylmorpholin-4-yl]methanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 kadam, R.U, Wilson, I.A. 登録日 2020-03-31 公開日 2020-08-05 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.68 Å) 主引用文献 An influenza A hemagglutinin small-molecule fusion inhibitor identified by a new high-throughput fluorescence polarization screen. Proc.Natl.Acad.Sci.USA, 117, 2020
1UOR	X-RAY STUDY OF RECOMBINANT HUMAN SERUM ALBUMIN. PHASES DETERMINED BY MOLECULAR REPLACEMENT METHOD, USING LOW RESOLUTION STRUCTURE MODEL OF TETRAGONAL FORM OF HUMAN SERUM ALBUMIN 分子名称: SERUM ALBUMIN 著者 Carter, D.C, Ho, J.X. 登録日 1998-03-10 公開日 1998-05-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Atomic structure and chemistry of human serum albumin. Nature, 358, 1992
2RF6	Crystal Structure of the Vaccinia Virus Dual-Specificity Phosphatase VH1 分子名称: Dual specificity protein phosphatase, SULFATE ION 著者 Koksal, A.C, Cingolani, G. 登録日 2007-09-28 公開日 2008-09-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal Structure of the Vaccinia Virus Dual-Specificity Phosphatase VH1 To be Published
2B8H	A/NWS/whale/Maine/1/84 (H1N9) reassortant influenza virus neuraminidase 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ... 著者 Smith, B.J, Platis, D, Cox, M.M.J, Huyton, T, Joosten, R.P, McKimm-Breschkin, J.L, Zhang, J.-G, Luo, C.S, Lou, M.-Z, Garrett, T.P.J, Labrou, N.E. 登録日 2005-10-07 公開日 2006-09-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a calcium-deficient form of influenza virus neuraminidase: implications for substrate binding. Acta Crystallogr.,Sect.D, 62, 2006
6BF4	Crystal Structure of HIV-1 Clade AE Strain CNE55 gp120 Core in Complex with Neutralizing Antibody VRC-PG05 that Targets the Center of the Silent Face on the Outer Domain of gp120 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Zhou, T, Kwong, P.D. 登録日 2017-10-25 公開日 2018-03-07 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.382 Å) 主引用文献 A Neutralizing Antibody Recognizing Primarily N-Linked Glycan Targets the Silent Face of the HIV Envelope. Immunity, 48, 2018
6B0N	Crystal structure of the cleavage-independent prefusion HIV Env glycoprotein trimer of the clade A BG505 isolate (NFL construct) in complex with Fabs PGT122 and PGV19 at 3.39 A 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp140, ... 著者 Sarkar, A, Irimia, A, Wilson, I.A. 登録日 2017-09-14 公開日 2018-05-30 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure of a cleavage-independent HIV Env recapitulates the glycoprotein architecture of the native cleaved trimer. Nat Commun, 9, 2018
6CH7	XFEL crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and 35O22 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Barnes, C.O, Bjorkman, P.J. 登録日 2018-02-22 公開日 2018-05-02 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structural characterization of a highly-potent V3-glycan broadly neutralizing antibody bound to natively-glycosylated HIV-1 envelope. Nat Commun, 9, 2018

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