PDB: 1500 件ウェブページステータス検索Chemie searchBIRD

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4PEG	Dbr1 in complex with guanosine-5'-monophosphate 分子名称: GLYCEROL, GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ... 著者 Montemayor, E.J, Katolik, A, Clark, N.E, Taylor, A.B, Schuermann, J.P, Combs, D.J, Johnsson, R, Holloway, S.P, Stevens, S.W, Damha, M.J, Hart, P.J. 登録日 2014-04-23 公開日 2014-08-27 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1. Nucleic Acids Res., 42, 2014
4PEF	Dbr1 in complex with sulfate 分子名称: GLYCEROL, MANGANESE (II) ION, RNA lariat debranching enzyme, ... 著者 Montemayor, E.J, Katolik, A, Clark, N.E, Taylor, A.B, Schuermann, J.P, Combs, D.J, Johnsson, R, Holloway, S.P, Stevens, S.W, Damha, M.J, Hart, P.J. 登録日 2014-04-23 公開日 2014-08-27 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Structural basis of lariat RNA recognition by the intron debranching enzyme Dbr1. Nucleic Acids Res., 42, 2014
3LRV	The Prp19 WD40 Domain Contains a Conserved Protein Interaction Region Essential for its Function. 分子名称: Pre-mRNA-splicing factor 19, SULFATE ION 著者 Vander Kooi, C.W, Chazin, W.J. 登録日 2010-02-11 公開日 2010-05-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 The Prp19 WD40 domain contains a conserved protein interaction region essential for its function. Structure, 18, 2010
2M09	Structure, phosphorylation and U2AF65 binding of the Nterminal Domain of splicing factor 1 during 3 splice site Recognition 分子名称: Splicing factor 1 著者 Madl, T, Sattler, M, Zhang, Y, Bagdiul, I, Kern, T, Kang, H, Zou, P, Maeusbacher, N, Sieber, S.A, Kraemer, A. 登録日 2012-10-22 公開日 2013-01-30 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3'-splice site recognition. Nucleic Acids Res., 41, 2013
4FAX	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Na+ and Mg2+ 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2012-05-22 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4FAW	Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and a hydrolyzed oligonucleotide fragment 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-R(*A*UP*UP*UP*AP*UP*UP*A)-3', Group IIC intron, ... 著者 Marcia, M, Pyle, A.M. 登録日 2012-05-22 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4FAU	Structure of Oceanobacillus iheyensis group II intron in the presence of Li+, Mg2+ and 5'-exon 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2012-05-22 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.87 Å) 主引用文献 Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4FAR	Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Mg2+ and 5'-exon 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2012-05-22 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4FAQ	Structure of Oceanobacillus iheyensis group II intron in the presence of K+, Ca2+ and 5'-exon 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, Group IIC intron, ... 著者 Marcia, M, Pyle, A.M. 登録日 2012-05-22 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4FB0	Structure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+ 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2012-05-22 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.22 Å) 主引用文献 Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
3CGP	X-ray structure of a pseudouridine-containing yeast spliceosomal U2 snRNA-intron branch site duplex bound to iodide ions 分子名称: IODIDE ION, RNA (5'-R(*CP*GP*CP*UP*AP*CP*UP*AP*AP*CP*GP*CP*G)-3'), RNA (5'-R(*GP*CP*GP*CP*GP*(PSU)P*AP*GP*UP*AP*GP*C)-3'), ... 著者 Lin, Y, Kielkopf, C.L. 登録日 2008-03-06 公開日 2008-07-01 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.57 Å) 主引用文献 X-ray structures of U2 snRNA-branchpoint duplexes containing conserved pseudouridines. Biochemistry, 47, 2008
3CGQ	X-ray structure of a pseudouridine-containing yeast spliceosomal U2 snRNA-intron branch site duplex 分子名称: RNA (5'-R(*CP*GP*CP*UP*AP*CP*UP*AP*AP*CP*GP*CP*G)-3'), RNA (5'-R(*GP*CP*GP*CP*GP*(PSU)P*AP*GP*UP*AP*GP*C)-3'), SULFATE ION 著者 Lin, Y, Kielkopf, C.L. 登録日 2008-03-06 公開日 2008-07-01 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 X-ray structures of U2 snRNA-branchpoint duplexes containing conserved pseudouridines. Biochemistry, 47, 2008
4YHW	Yeast Prp3 (296-469) in complex with fragment of U4/U6 di-snRNA 分子名称: U4 snRNA fragment, U4/U6 small nuclear ribonucleoprotein PRP3, U6 snRNA fragment 著者 Liu, S, Wahl, M.C. 登録日 2015-02-27 公開日 2015-07-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 A composite double-/single-stranded RNA-binding region in protein Prp3 supports tri-snRNP stability and splicing. Elife, 4, 2015
4DGW	Crystal Structure of the SF3a splicing factor complex of U2 snRNP 分子名称: Pre-mRNA-splicing factor PRP11, Pre-mRNA-splicing factor PRP21, Pre-mRNA-splicing factor PRP9, ... 著者 Lin, P.C. 登録日 2012-01-26 公開日 2012-05-02 最終更新日 2018-07-25 実験手法 X-RAY DIFFRACTION (3.112 Å) 主引用文献 Structure and assembly of the SF3a splicing factor complex of U2 snRNP Embo J., 31, 2012
8DZK	Dbr1 in complex with 5-mer cleavage product 分子名称: FE (II) ION, RNA (5'-R(P*(G46)P*UP*GP*UP*U)-3'), RNA lariat debranching enzyme, ... 著者 Clark, N.E, Taylor, A.B. 登録日 2022-08-08 公開日 2022-08-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structure of the RNA Lariat Debranching Enzyme Dbr1 with Hydrolyzed Phosphorothioate RNA Product. Biochemistry, 61, 2022
1AUD	U1A-UTRRNA, NMR, 31 STRUCTURES 分子名称: RNA 3UTR, U1A 102 著者 Allain, F.H.-T, Gubser, C.C, Howe, P.W.A, Nagai, K, Neuhaus, D, Varani, G. 登録日 1997-08-22 公開日 1998-02-25 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural basis of the RNA-binding specificity of human U1A protein. EMBO J., 16, 1997
1DRZ	U1A SPLICEOSOMAL PROTEIN/HEPATITIS DELTA VIRUS GENOMIC RIBOZYME COMPLEX 分子名称: MAGNESIUM ION, PROTEIN (U1 SMALL RIBONUCLEOPROTEIN A), RNA (HEPATITIS DELTA VIRUS GENOMIC RIBOZYME), ... 著者 Ferre-D'Amare, A.R, Zhou, K, Doudna, J.A. 登録日 1998-09-01 公開日 1999-02-16 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of a hepatitis delta virus ribozyme. Nature, 395, 1998
7SN6	U2AF65 UHM BOUND TO SF3B155 ULM5 分子名称: ISOPROPYL ALCOHOL, Splicing factor 3B subunit 1, Splicing factor U2AF 65 kDa subunit 著者 Loerch, S, Jenkins, J.L, Kielkopf, C.L. 登録日 2021-10-27 公開日 2022-07-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A UHM-ULM interface with unusual structural features contributes to U2AF2 and SF3B1 association for pre-mRNA splicing. J.Biol.Chem., 298, 2022
6T3S	Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of Na+, Mg2+ and 5'-exon 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC Intron Ribozyme, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2019-10-11 公開日 2020-05-13 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Visualizing group II intron dynamics between the first and second steps of splicing. Nat Commun, 11, 2020
6T3N	Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of Na+, Mg2+ and 5'-exon 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC Intron Ribozyme, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2019-10-11 公開日 2020-05-13 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.22 Å) 主引用文献 Visualizing group II intron dynamics between the first and second steps of splicing. Nat Commun, 11, 2020
6T3R	Structure of Oceanobacillus iheyensis group II intron U-mutant (C289U/C358U/G385A) in the presence of K+, Mg2+ and 5'-exon 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC Intron Ribozyme, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2019-10-11 公開日 2020-05-13 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.57 Å) 主引用文献 Visualizing group II intron dynamics between the first and second steps of splicing. Nat Commun, 11, 2020
6T3K	Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of K+, Mg2+ and 5'-exon 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC Intron Ribozyme, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2019-10-11 公開日 2020-05-13 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.44 Å) 主引用文献 Visualizing group II intron dynamics between the first and second steps of splicing. Nat Commun, 11, 2020
1I8F	THE CRYSTAL STRUCTURE OF A HEPTAMERIC ARCHAEAL SM PROTEIN: IMPLICATIONS FOR THE EUKARYOTIC SNRNP CORE 分子名称: GLYCEROL, PUTATIVE SNRNP SM-LIKE PROTEIN 著者 Mura, C, Cascio, D, Sawaya, M.R, Eisenberg, D. 登録日 2001-03-14 公開日 2001-05-16 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core. Proc.Natl.Acad.Sci.USA, 98, 2001
2SXL	SEX-LETHAL RBD1, NMR, MINIMIZED AVERAGE STRUCTURE 分子名称: SEX-LETHAL PROTEIN 著者 Inoue, M, Muto, Y, Sakamoto, H, Kigawa, T, Takio, K, Shimura, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 1997-07-16 公開日 1998-07-22 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 A characteristic arrangement of aromatic amino acid residues in the solution structure of the amino-terminal RNA-binding domain of Drosophila sex-lethal. J.Mol.Biol., 272, 1997
2JXW	Solution Structure of the Tandem WW Domains of FBP21 分子名称: WW domain-binding protein 4 著者 Huang, X, Zhang, J, Wu, J, Shi, Y. 登録日 2007-11-30 公開日 2008-12-02 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure and function of the two tandem WW domains of the pre-mRNA splicing factor FBP21 (formin-binding protein 21) J.Biol.Chem., 284, 2009

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