PDB: 82129 件ウェブページステータス検索Chemie searchBIRD

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8GTO	cryo-EM structure of Omicron BA.5 S protein in complex with XGv282 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ... 著者 Xia, X.Y, Zhang, Y.Y, Chi, X.M, Huang, B.D, Wu, L.S, Zhou, Q. 登録日 2022-09-08 公開日 2023-07-12 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Comprehensive structural analysis reveals broad-spectrum neutralizing antibodies against SARS-CoV-2 Omicron variants. Cell Discov, 9, 2023
8GTH	Crystal strucuture of cyt c551 from anoxygenic phototrophic bacterium Roseiflexus castenholzii 分子名称: Cytochrome c class I, HEME C 著者 Min, Z.Z, Meng, H.L, Xu, X.L. 登録日 2022-09-08 公開日 2023-09-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 A cytochrome c 551 mediates the cyclic electron transport chain of the anoxygenic phototrophic bacterium Roseiflexus castenholzii. Plant Commun., 5, 2024
8GT9	Selective targeting of the Beclin 2-Atg14L coiled coil complex by stapled peptides promotes autophagy and endolysosomal trafficking of GPCRs 分子名称: Beclin-2 著者 Qiu, X, Zhao, Y. 登録日 2022-09-07 公開日 2023-07-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The potent BECN2-ATG14 coiled-coil interaction is selectively critical for endolysosomal degradation of GPRASP1/GASP1-associated GPCRs. Autophagy, 19, 2023
8GT7	Structure of falcipain and human Stefin A mutant complex 分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Cystatin-A, ... 著者 Chakraborty, S, Biswas, S. 登録日 2022-09-07 公開日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Structure of falcipain and human Stefin A complex To Be Published
8GT5	Crystal structure of human cardiac alpha actin Q137A mutant (ADP-Pi state) in complex with fragmin F1 domain 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ... 著者 Iwasa, M, Oda, T, Takeda, S. 登録日 2022-09-07 公開日 2023-03-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
8GT4	Crystal structure of human cardiac alpha actin Q137A mutant (AMPPNP state) in complex with fragmin F1 domain 分子名称: 1,2-ETHANEDIOL, Actin, alpha cardiac muscle 1, ... 著者 Iwasa, M, Oda, T, Takeda, S. 登録日 2022-09-07 公開日 2023-03-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
8GT3	Crystal structure of human cardiac alpha actin P109A mutant (ADP-Pi state) in complex with fragmin F1 domain 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ... 著者 Iwasa, M, Oda, T, Takeda, S. 登録日 2022-09-07 公開日 2023-03-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
8GT2	Crystal structure of human cardiac alpha actin P109A mutant (AMPPNP state) in complex with fragmin F1 domain 分子名称: 1,2-ETHANEDIOL, Actin, alpha cardiac muscle 1, ... 著者 Iwasa, M, Oda, T, Takeda, S. 登録日 2022-09-07 公開日 2023-03-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
8GT1	Crystal structure of human cardiac alpha actin A108G mutant (ADP-Pi state) in complex with fragmin F1 domain 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Iwasa, M, Oda, T, Takeda, S. 登録日 2022-09-07 公開日 2023-03-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
8GT0	Structure of falcipain and human Stefin A complex 分子名称: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, CHLORIDE ION, ... 著者 Chakraborty, S, Biswas, S. 登録日 2022-09-07 公開日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Structure of falcipain and human Stefin A complex To Be Published
8GSY	X-ray structure of Clostridium perfringens pili protein B N-terminal domain 分子名称: Peptidoglycan bound protein 著者 Kamitori, S, Yamada, M, Tamai, E. 登録日 2022-09-07 公開日 2023-06-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural and biochemical characterization of Clostridium perfringens pili protein B collagen-binding domains. Febs Lett., 597, 2023
8GSX	X-ray structure of Clostridium perfringens pili protein B collagen-binding domains 分子名称: ACETATE ION, pili protein 著者 Kamitori, S, Yamada, M, Tamai, E. 登録日 2022-09-07 公開日 2023-06-07 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Structural and biochemical characterization of Clostridium perfringens pili protein B collagen-binding domains. Febs Lett., 597, 2023
8GSW	Crystal structure of human cardiac alpha actin A108G mutant (AMPPNP state) in complex with fragmin F1 domain 分子名称: 1,2-ETHANEDIOL, Actin, alpha cardiac muscle 1, ... 著者 Iwasa, M, Oda, T, Takeda, S. 登録日 2022-09-07 公開日 2023-03-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
8GSV	Crystal structure of human BAK in complex with the Pxt1 BH3 domain 分子名称: Bcl-2 homologous antagonist/killer, Peroxisomal testis-specific protein 1 著者 Lim, D, Ku, B. 登録日 2022-09-07 公開日 2023-05-10 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for proapoptotic activation of Bak by the noncanonical BH3-only protein Pxt1. Plos Biol., 21, 2023
8GSU	Crystal structure of human cardiac alpha actin (WT_ADP-Pi) in complex with fragmin F1 domain 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Actin, ... 著者 Iwasa, M, Oda, T, Takeda, S. 登録日 2022-09-07 公開日 2023-03-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mutagenic analysis of actin reveals the mechanism of His161 flipping that triggers ATP hydrolysis. Front Cell Dev Biol, 11, 2023
8GSQ	Structure based studies reveal an atypical antipsychotic drug candidate - Paliperidone as a potent hSOD1 modulator with implications in ALS treatment. 分子名称: (9~{R})-3-[2-[4-(6-fluoranyl-1,2-benzoxazol-3-yl)piperidin-1-yl]ethyl]-2-methyl-9-oxidanyl-6,7,8,9-tetrahydropyrido[1,2-a]pyrimidin-4-one, GLYCEROL, Superoxide dismutase [Cu-Zn], ... 著者 Aouti, S, Padmanabhan, B. 登録日 2022-09-06 公開日 2023-06-14 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure-based discovery of an antipsychotic drug, paliperidone, as a modulator of human superoxide dismutase 1: a potential therapeutic target in amyotrophic lateral sclerosis. Acta Crystallogr D Struct Biol, 79, 2023
8GSJ	APC-Asef tripeptide inhibitor 分子名称: (1R,2S)-2-phenylcyclopropanamine, 2-methylsulfanylpyrimidine-4-carbaldehyde, Adenomatous polyposis coli protein, ... 著者 Zhang, J, Wang, X.F, Song, K. 登録日 2022-09-06 公開日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 APC-Asef tripeptide inhibitor To Be Published
8GS9	SARS-CoV-2 BA.2 spike RBD in complex bound with VacBB-551 分子名称: Heavy chain of VacBB-551, Light chain of VacBB-551, Spike glycoprotein 著者 Liu, C.C, Ju, B, Shen, S.L, Zhang, Z. 登録日 2022-09-05 公開日 2023-05-03 最終更新日 2023-11-22 実験手法 ELECTRON MICROSCOPY (2.66 Å) 主引用文献 Omicron BQ.1.1 and XBB.1 unprecedentedly escape broadly neutralizing antibodies elicited by prototype vaccination. Cell Rep, 42, 2023
8GS8	cryo-EM structure of the human respiratory complex II 分子名称: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Du, Z, Zhou, X, Lai, Y, Xu, J, Zhang, Y, Zhou, S, Liu, F, Gao, Y, Gong, H, Rao, Z. 登録日 2022-09-05 公開日 2023-05-10 最終更新日 2024-07-03 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Structure of the human respiratory complex II. Proc.Natl.Acad.Sci.USA, 120, 2023
8GS7	SOLUTION NMR STRUCTURE OF N-TERMINAL DOMAIN OF TRICONEPHILA CLAVIPES MAJOR AMPULLATE SPIDROIN 2 分子名称: Major ampullate spidroin 2 variant 3 著者 Oktaviani, N.A, Malay, A.D, Matsugami, A, Hayashi, F, Numata, K. 登録日 2022-09-05 公開日 2023-03-15 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Unusual p K a Values Mediate the Self-Assembly of Spider Dragline Silk Proteins. Biomacromolecules, 24, 2023
8GS6	Structure of the SARS-CoV-2 BA.2.75 spike glycoprotein (closed state 1) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein 著者 Anraku, Y, Tabata-Sasaki, K, Kita, S, Fukuhara, H, Maenaka, K, Hashiguchi, T. 登録日 2022-09-05 公開日 2022-10-26 最終更新日 2023-03-29 実験手法 ELECTRON MICROSCOPY (2.86 Å) 主引用文献 Virological characteristics of the SARS-CoV-2 Omicron BA.2.75 variant. Cell Host Microbe, 30, 2022
8GS2	Structure of the Cas7-11-Csx29-guide RNA-target RNA (non-matching PFS) complex 分子名称: ADENOSINE MONOPHOSPHATE, CHAT domain-containing protein, CRISPR-associated RAMP family protein, ... 著者 Kato, K, Okazaki, S, Ishikawa, J, Isayama, Y, Nishizawa, T, Nishimasu, H. 登録日 2022-09-04 公開日 2022-11-09 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.84 Å) 主引用文献 RNA-triggered protein cleavage and cell growth arrest by the type III-E CRISPR nuclease-protease. Science, 378, 2022
8GRW	Spiroplasma melliferum FtsZ F224M bound to GDP 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE 著者 Chakraborty, J, Pananghat, G. 登録日 2022-09-02 公開日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.40005422 Å) 主引用文献 Structural basis of kinetic polarity of FtsZ from cell wall less bacterium Spiroplasma To Be Published
8GRV	Dictyostelium discoideum Lactate dehydrogenase (DicLDHA)with NAD 分子名称: ACETATE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative D-lactate dehydrogenase 著者 Dao, O, Lee, K.H. 登録日 2022-09-02 公開日 2022-10-26 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Dictyostelium discoideum Lactate dehydrogenase (DicLDHA) To Be Published
8GRT	Small Dipeptide Analogues developed by Co-crystal Structure of Stenotrophomonas maltophilia Dipeptidyl Peptidase 7 分子名称: 2-AMINO-3-CYCLOHEXYL-PROPIONIC ACID, Dipeptidyl-peptidase, TYROSINE 著者 Yasumitsu, S, Koushi, H, Akihiro, N, Yoshiyuki, Y, Wataru, O, Mizuki, S, Saori, R, Nobutada, T, Anna, M, Keiko, H, Tsuda, Y. 登録日 2022-09-02 公開日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Small Dipeptide Analogues Generated by Co-crystal Structure of Bacterial Dipeptidyl Peptidase 7 to Defeat Stenotrophomonas maltophilia To Be Published

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