PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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2ISC	Crystal structure of Purine Nucleoside Phosphorylase from Trichomonas vaginalis with DADMe-Imm-A 分子名称: (3R,4R)-1-[(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)METHYL]-4-(HYDROXYMETHYL)PYRROLIDIN-3-OL, PHOSPHATE ION, purine nucleoside phosphorylase 著者 Rinaldo-Matthis, A, Almo, S.C, Schramm, V.L. 登録日 2006-10-17 公開日 2007-06-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Inhibition and structure of Trichomonas vaginalis purine nucleoside phosphorylase with picomolar transition state analogues Biochemistry, 46, 2007
3BJE	Crystal structure of Trypanosoma brucei nucleoside phosphorylase shows uridine phosphorylase activity 分子名称: 1-O-phosphono-alpha-D-ribofuranose, CALCIUM ION, Nucleoside phosphorylase, ... 著者 Larson, E.T, Merritt, E.A, Structural Genomics of Pathogenic Protozoa Consortium (SGPP) 登録日 2007-12-03 公開日 2007-12-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 The Crystal Structure and Activity of a Putative Trypanosomal Nucleoside Phosphorylase Reveal It to be a Homodimeric Uridine Phosphorylase J.Mol.Biol., 396, 2010
3BL6	Crystal structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase in complex with formycin A 分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase 著者 Siu, K.K.W, Lee, J.E, Smith, G.D, Horvatin, C, Howell, P.L. 登録日 2007-12-10 公開日 2008-06-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Acta Crystallogr.,Sect.F, 64, 2008
3BGS	Structure of human purine nucleoside phosphorylase with L-DADMe-ImmH and phosphate 分子名称: 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-ium-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, purine nucleoside phosphorylase 著者 Murkin, A.S, Ramagopal, U.A, Almo, S.C, Schramm, V.L. 登録日 2007-11-27 公開日 2008-01-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.099 Å) 主引用文献 L-Enantiomers of transition state analogue inhibitors bound to human purine nucleoside phosphorylase J.Am.Chem.Soc., 130, 2008
1ODL	PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS 分子名称: CHLORIDE ION, GLYCEROL, PURINE NUCLEOSIDE PHOSPHORYLASE, ... 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-02-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
6GP0	Structure of mEos4b in the red fluorescent state 分子名称: Green to red photoconvertible GFP-like protein EosFP 著者 De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D. 登録日 2018-06-04 公開日 2019-05-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM. Nat.Methods, 16, 2019
6GOY	Structure of mEos4b in the green fluorescent state 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D. 登録日 2018-06-04 公開日 2019-05-22 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM. Nat.Methods, 16, 2019
1ODI	Purine nucleoside phosphorylase from Thermus Thermophilus 分子名称: ADENOSINE, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-02-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
1ODJ	PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS 分子名称: GUANOSINE, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-03-04 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
1ODK	PURINE NUCLEOSIDE PHOSPHORYLASE FROM THERMUS THERMOPHILUS 分子名称: GLYCEROL, PURINE NUCLEOSIDE PHOSPHORYLASE 著者 Tahirov, T.H, Inagaki, E, Miyano, M. 登録日 2003-02-19 公開日 2003-02-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure of Purine Nucleoside Phosphorylase from Thermus Thermophilus J.Mol.Biol., 337, 2004
2LVZ	Solution structure of a Eosinophil Cationic Protein-trisaccharide heparin mimetic complex 分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-propan-2-yl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside, Eosinophil cationic protein 著者 Garcia Mayoral, M, Canales, A, Diaz, D, Lopez Prados, J, Moussaoui, M, de Paz, J, Angulo, J, Nieto, P, Jimenez Barbero, J, Boix, E, Bruix, M. 登録日 2012-07-17 公開日 2013-07-31 最終更新日 2024-11-27 実験手法 SOLUTION NMR 主引用文献 Insights into the glycosaminoglycan-mediated cytotoxic mechanism of eosinophil cationic protein revealed by NMR. Acs Chem.Biol., 8, 2013
8DB7	Adenosine/guanosine nucleoside hydrolase bound to a fragment inhibitor 分子名称: CALCIUM ION, GLYCEROL, Inosine-uridine preferring nucleoside hydrolase family protein, ... 著者 Muellers, S.N, Allen, K.N, Stockman, B.J. 登録日 2022-06-14 公開日 2022-09-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase. Biochemistry, 61, 2022
1NDC	X-RAY STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE COMPLEXED WITH DTDP AND MG2+ AT 2 A RESOLUTION 分子名称: MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE, THYMIDINE-5'-DIPHOSPHATE 著者 Cherfils, J, Morera, S, Janin, J. 登録日 1994-04-27 公開日 1994-06-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 X-ray structure of nucleoside diphosphate kinase complexed with thymidine diphosphate and Mg2+ at 2-A resolution. Biochemistry, 33, 1994
3ELH	X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with dUDP 分子名称: DEOXYURIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase 著者 Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C. 登録日 2008-09-22 公開日 2009-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase. J.Virol., 83, 2009
8DB9	Adenosine/guanosine nucleoside hydrolase bound to inhibitor 分子名称: 1-beta-D-ribofuranosyl-1H-1,2,4-triazole-3-carboximidamide, CALCIUM ION, Inosine-uridine preferring nucleoside hydrolase family protein 著者 Muellers, S.N, Allen, K.N, Stockman, B.J. 登録日 2022-06-14 公開日 2022-09-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase. Biochemistry, 61, 2022
8DB6	Adenosine/guanosine nucleoside hydrolase 分子名称: CALCIUM ION, GLYCEROL, Inosine-uridine preferring nucleoside hydrolase family protein 著者 Muellers, S.N, Allen, K.N, Stockman, B.J. 登録日 2022-06-14 公開日 2022-09-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase. Biochemistry, 61, 2022
8DB8	Adenosine/guanosine nucleoside hydrolase bound to ImH 分子名称: 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, Inosine-uridine preferring nucleoside hydrolase family protein 著者 Muellers, S.N, Allen, K.N, Stockman, B.J. 登録日 2022-06-14 公開日 2022-09-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structure-Guided Insight into the Specificity and Mechanism of a Parasitic Nucleoside Hydrolase. Biochemistry, 61, 2022
1NDP	ADENOSINE 5'-DIPHOSPHATE BINDING AND THE ACTIVE SITE OF NUCLEOSIDE DIPHOSPHATE KINASE 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Janin, J, Morera, S, Dumas, C, Lascu, I, Lebras, G, Veron, M. 登録日 1993-11-29 公開日 1994-04-30 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Adenosine 5'-diphosphate binding and the active site of nucleoside diphosphate kinase. Biochemistry, 33, 1994
3EE3	Crystal structure of Acanthamoeba polyphaga mimivirus nucleoside diphosphate kinase complexed with CDP 分子名称: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase 著者 Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C. 登録日 2008-09-04 公開日 2009-06-16 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase. J.Virol., 83, 2009
3EIC	X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with UDP 分子名称: MAGNESIUM ION, Nucleoside diphosphate kinase, URIDINE-5'-DIPHOSPHATE 著者 Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C. 登録日 2008-09-15 公開日 2009-06-16 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase. J.Virol., 83, 2009
1NLK	CRYSTAL STRUCTURE OF MYXOCOCCUS XANTHUS NUCLEOSIDE DIPHOSPHATE KINASE AND ITS INTERACTION WITH A NUCLEOTIDE SUBSTRATE AT 2.0 ANGSTROMS RESOLUTION 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Williams, R.L. 登録日 1994-03-01 公開日 1994-05-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of Myxococcus xanthus nucleoside diphosphate kinase and its interaction with a nucleotide substrate at 2.0 A resolution. J.Mol.Biol., 234, 1993
1LWX	AZT DIPHOSPHATE BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE 分子名称: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Janin, J, Xu, Y. 登録日 1997-04-30 公開日 1997-08-20 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 X-ray analysis of azido-thymidine diphosphate binding to nucleoside diphosphate kinase. Proc.Natl.Acad.Sci.USA, 94, 1997
6XZ2	Crystal structure of E. Coli purine nucleoside phosphorylase mutant Y160W with SO4 and Formycin A 分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, Purine nucleoside phosphorylase DeoD-type, SULFATE ION 著者 Narczyk, M, Bzowska, A. 登録日 2020-01-31 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.65000308 Å) 主引用文献 Single tryptophan Y160W mutant of homooligomeric E. coli purine nucleoside phosphorylase implies that dimers forming the hexamer are functionally not equivalent. Sci Rep, 11, 2021
1NHK	CRYSTAL STRUCTURE OF MYXOCOCCUS XANTHUS NUCLEOSIDE DIPHOSPHATE KINASE AND ITS INTERACTION WITH A NUCLEOTIDE SUBSTRATE AT 2.0 ANGSTROMS RESOLUTION 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, NUCLEOSIDE DIPHOSPHATE KINASE 著者 Strelkov, S, Williams, R.L. 登録日 1994-12-09 公開日 1995-03-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The 1.9 A crystal structure of a nucleoside diphosphate kinase complex with adenosine 3',5'-cyclic monophosphate: evidence for competitive inhibition. J.Mol.Biol., 249, 1995
2YFC	STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mn and dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ... 著者 Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M. 登録日 2011-04-05 公開日 2011-07-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011

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