6IPM
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![BU of 6ipm by Molmil](/molmil-images/mine/6ipm) | Binary Complex of Human DNA Polymerase Mu with MgdCTP | 分子名称: | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA-directed DNA/RNA polymerase mu, MAGNESIUM ION, ... | 著者 | Chang, Y.K, Wu, W.J, Tsai, M.D. | 登録日 | 2018-11-03 | 公開日 | 2019-05-29 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (1.72 Å) | 主引用文献 | Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
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7PDU
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6IPI
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![BU of 6ipi by Molmil](/molmil-images/mine/6ipi) | Binary Complex of Human DNA Polymerase Mu with MndCTP | 分子名称: | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA-directed DNA/RNA polymerase mu, MANGANESE (II) ION, ... | 著者 | Chang, Y.K, Wu, W.J, Tsai, M.D. | 登録日 | 2018-11-03 | 公開日 | 2019-05-29 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
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6IPL
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![BU of 6ipl by Molmil](/molmil-images/mine/6ipl) | Binary Complex of Human DNA Polymerase Mu with MgdATP | 分子名称: | 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA-directed DNA/RNA polymerase mu, MAGNESIUM ION, ... | 著者 | Chang, Y.K, Wu, W.J, Tsai, M.D. | 登録日 | 2018-11-03 | 公開日 | 2019-05-29 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (1.64 Å) | 主引用文献 | Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
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8U8L
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![BU of 8u8l by Molmil](/molmil-images/mine/8u8l) | X-ray crystal structure of TEBP-2 MCD3 with ds DNA | 分子名称: | CESIUM ION, DNA (5'-D(*CP*TP*GP*TP*TP*AP*GP*GP*CP*TP*TP*AP*GP*GP*CP*TP*TP*AP*G)-3'), DNA (5'-D(*TP*CP*TP*AP*AP*GP*CP*CP*TP*AP*AP*GP*CP*CP*TP*AP*AP*CP*A)-3'), ... | 著者 | Nandakumar, J, Padmanaban, S. | 登録日 | 2023-09-18 | 公開日 | 2024-04-03 | 最終更新日 | 2024-04-24 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Caenorhabditis elegans telomere-binding proteins TEBP-1 and TEBP-2 adapt the Myb module to dimerize and bind telomeric DNA. Proc.Natl.Acad.Sci.USA, 121, 2024
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1QSS
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![BU of 1qss by Molmil](/molmil-images/mine/1qss) | DDGTP-TRAPPED CLOSED TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS | 分子名称: | 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*AP*CP*CP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3', 5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DDG))-3', ... | 著者 | Li, Y, Mitaxov, V, Waksman, G. | 登録日 | 1999-06-23 | 公開日 | 1999-08-16 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structure-based design of Taq DNA polymerases with improved properties of dideoxynucleotide incorporation. Proc.Natl.Acad.Sci.USA, 96, 1999
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1QSY
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![BU of 1qsy by Molmil](/molmil-images/mine/1qsy) | DDATP-Trapped closed ternary complex of the large fragment of DNA Polymerase I from thermus aquaticus | 分子名称: | 2',3'-dideoxyadenosine triphosphate, 5'-D(*AP*TP*TP*GP*CP*GP*CP*CP*TP*P*GP*GP*TP*C)-3', 5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(2DA))-3', ... | 著者 | Li, Y, Mitaxov, V, Waksman, G. | 登録日 | 1999-06-24 | 公開日 | 1999-08-16 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structure-based design of Taq DNA polymerases with improved properties of dideoxynucleotide incorporation. Proc.Natl.Acad.Sci.USA, 96, 1999
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7OXA
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![BU of 7oxa by Molmil](/molmil-images/mine/7oxa) | Target-bound SpCas9 complex with AAVS1 chimeric RNA-DNA guide | 分子名称: | AAVS1 non-target DNA strand, AAVS1 target DNA strand, CRISPR-associated endonuclease Cas9/Csn1, ... | 著者 | Donohoue, P, Pacesa, M, Lau, E, Vidal, B, Irby, M.J, Nyer, D.B, Rotstein, T, Banh, L, Toh, M.T, Gibson, J, Kohrs, B, Baek, K, Owen, A.L.G, Slorach, E.M, van Overbeek, M, Fuller, C.K, May, A.P, Jinek, M, Cameron, P. | 登録日 | 2021-06-22 | 公開日 | 2021-09-15 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Conformational control of Cas9 by CRISPR hybrid RNA-DNA guides mitigates off-target activity in T cells. Mol.Cell, 81, 2021
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7OX7
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![BU of 7ox7 by Molmil](/molmil-images/mine/7ox7) | Target-bound SpCas9 complex with TRAC chimeric RNA-DNA guide | 分子名称: | CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, POTASSIUM ION, ... | 著者 | Donohoue, P, Pacesa, M, Lau, E, Vidal, B, Irby, M.J, Nyer, D.B, Rotstein, T, Banh, L, Toh, M.T, Gibson, J, Kohrs, B, Baek, K, Owen, A.L.G, Slorach, E.M, van Overbeek, M, Fuller, C.K, May, A.P, Jinek, M, Cameron, P. | 登録日 | 2021-06-22 | 公開日 | 2021-09-15 | 最終更新日 | 2024-01-31 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Conformational control of Cas9 by CRISPR hybrid RNA-DNA guides mitigates off-target activity in T cells. Mol.Cell, 81, 2021
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6W6W
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![BU of 6w6w by Molmil](/molmil-images/mine/6w6w) | Cryo-EM structure of CST bound to telomeric single-stranded DNA | 分子名称: | CST complex subunit CTC1, CST complex subunit STN1, CST complex subunit TEN1, ... | 著者 | Lim, C, Barbour, A.T, Zaug, A.J, Goodrich, K.J, McKay, A.E, Wuttke, D.S, Cech, T.R. | 登録日 | 2020-03-17 | 公開日 | 2020-06-03 | 最終更新日 | 2020-06-17 | 実験手法 | ELECTRON MICROSCOPY (3 Å) | 主引用文献 | The structure of human CST reveals a decameric assembly bound to telomeric DNA. Science, 368, 2020
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6WG3
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![BU of 6wg3 by Molmil](/molmil-images/mine/6wg3) | Cryo-EM structure of human Cohesin-NIPBL-DNA complex | 分子名称: | Cohesin subunit SA-1, DNA (51-MER), Double-strand-break repair protein rad21 homolog, ... | 著者 | Shi, Z.B, Gao, H, Bai, X.C, Yu, H. | 登録日 | 2020-04-04 | 公開日 | 2020-05-20 | 最終更新日 | 2024-03-06 | 実験手法 | ELECTRON MICROSCOPY (5.3 Å) | 主引用文献 | Cryo-EM structure of the human cohesin-NIPBL-DNA complex. Science, 368, 2020
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3W1G
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5MVL
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![BU of 5mvl by Molmil](/molmil-images/mine/5mvl) | Crystal structure of an A-DNA dodecamer containing 5-bromouracil | 分子名称: | Brominated DNA dodecamer, MAGNESIUM ION | 著者 | Hardwick, J.S, Ptchelkine, D, Phillips, S.E.V, Brown, T. | 登録日 | 2017-01-16 | 公開日 | 2017-05-10 | 最終更新日 | 2024-05-08 | 実験手法 | X-RAY DIFFRACTION (1.405 Å) | 主引用文献 | 5-Formylcytosine does not change the global structure of DNA. Nat. Struct. Mol. Biol., 24, 2017
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6IPK
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![BU of 6ipk by Molmil](/molmil-images/mine/6ipk) | Binary Complex of Human DNA Polymerase Mu with Mn8oxodGTP | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA-directed DNA/RNA polymerase mu, ... | 著者 | Chang, Y.K, Wu, W.J, Tsai, M.D. | 登録日 | 2018-11-03 | 公開日 | 2019-05-29 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
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3IN5
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![BU of 3in5 by Molmil](/molmil-images/mine/3in5) | Structure of human DNA polymerase kappa inserting dATP opposite an 8-oxoG DNA lesion | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*C*CP*TP*AP*(8OG)P*GP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*GP*G*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*(DOC))-3'), ... | 著者 | Silverstein, T.D, Vasquez-Del Carpio, R, Aggarwal, A.K. | 登録日 | 2009-08-11 | 公開日 | 2009-09-08 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Structure of human DNA polymerase kappa inserting dATP opposite an 8-oxoG DNA lesion PLOS ONE, 4, 2009
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4I9L
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![BU of 4i9l by Molmil](/molmil-images/mine/4i9l) | Crystal structure of the D714A mutant of RB69 DNA polymerase | 分子名称: | CHLORIDE ION, DNA polymerase, GUANOSINE, ... | 著者 | Jacewicz, A, Trzemecka, A, Guja, K.E, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M. | 登録日 | 2012-12-05 | 公開日 | 2013-10-09 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site. Plos One, 8, 2013
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3W5O
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![BU of 3w5o by Molmil](/molmil-images/mine/3w5o) | Crystal Structure of Human DNA ligase IV | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, DNA ligase 4, SULFATE ION | 著者 | Gu, X, Ochi, T, Blundell, T.L. | 登録日 | 2013-02-02 | 公開日 | 2013-04-03 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.84 Å) | 主引用文献 | Structure of the catalytic region of DNA ligase IV in complex with an artemis fragment sheds light on double-strand break repair Structure, 21, 2013
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3AAF
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![BU of 3aaf by Molmil](/molmil-images/mine/3aaf) | Structure of WRN RQC domain bound to double-stranded DNA | 分子名称: | ACETATE ION, DNA (5'-D(*AP*CP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*GP*T)-3'), Werner syndrome ATP-dependent helicase | 著者 | Kitano, K, Hakoshima, T. | 登録日 | 2009-11-16 | 公開日 | 2010-02-16 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis for DNA strand separation by the unconventional winged-helix domain of RecQ helicase WRN Structure, 18, 2010
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4I9Q
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![BU of 4i9q by Molmil](/molmil-images/mine/4i9q) | Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase | 分子名称: | 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'), ... | 著者 | Guja, K.E, Jacewicz, A, Trzemecka, A, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M. | 登録日 | 2012-12-05 | 公開日 | 2013-10-09 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site. Plos One, 8, 2013
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8FYB
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![BU of 8fyb by Molmil](/molmil-images/mine/8fyb) | Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex | 分子名称: | Cas1, Cas2-DEDDh, DNA (17-MER), ... | 著者 | Skopintsev, P, Tuck, O.T, Soczek, K.M, Doudna, J. | 登録日 | 2023-01-25 | 公開日 | 2023-05-03 | 最終更新日 | 2024-06-19 | 実験手法 | ELECTRON MICROSCOPY (3.1 Å) | 主引用文献 | Genome expansion by a CRISPR trimmer-integrase. Nature, 618, 2023
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8FYC
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![BU of 8fyc by Molmil](/molmil-images/mine/8fyc) | Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex linear CRISPR repeat conformation | 分子名称: | Cas1, Cas2-DEDDh, DEDDh, ... | 著者 | Skopintsev, P, Tuck, O.T, Soczek, K.M, Doudna, J. | 登録日 | 2023-01-25 | 公開日 | 2023-05-03 | 最終更新日 | 2024-06-19 | 実験手法 | ELECTRON MICROSCOPY (4.1 Å) | 主引用文献 | Genome expansion by a CRISPR trimmer-integrase. Nature, 618, 2023
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8FYD
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![BU of 8fyd by Molmil](/molmil-images/mine/8fyd) | Cryo-EM structure of Cas1:Cas2-DEDDh:half-site integration complex bent CRISPR repeat conformation | 分子名称: | Cas1, Cas2-DEDDh, DNA (13-MER), ... | 著者 | Skopintsev, P, Tuck, O.T, Soczek, K.M, Doudna, J. | 登録日 | 2023-01-25 | 公開日 | 2023-05-03 | 最終更新日 | 2024-06-19 | 実験手法 | ELECTRON MICROSCOPY (3.9 Å) | 主引用文献 | Genome expansion by a CRISPR trimmer-integrase. Nature, 618, 2023
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5MVT
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![BU of 5mvt by Molmil](/molmil-images/mine/5mvt) | Crystal structure of an A-DNA dodecamer featuring an alternating pyrimidine-purine sequence | 分子名称: | COBALT (III) ION, DNA | 著者 | Hardwick, J.S, Ptchelkine, D, Phillips, S.E.V, Brown, T. | 登録日 | 2017-01-17 | 公開日 | 2017-05-10 | 最終更新日 | 2024-01-17 | 実験手法 | X-RAY DIFFRACTION (1.896 Å) | 主引用文献 | 5-Formylcytosine does not change the global structure of DNA. Nat. Struct. Mol. Biol., 24, 2017
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8FW7
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![BU of 8fw7 by Molmil](/molmil-images/mine/8fw7) | Histone from Bdellovibrio bacteriovorus bound to dsDNA | 分子名称: | CBFD_NFYB_HMF domain-containing protein, DNA (5'-D(P*AP*T)-3'), DNA (5'-D(P*CP*AP*T)-3') | 著者 | Laursen, S.P, Luger, K. | 登録日 | 2023-01-20 | 公開日 | 2023-08-30 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus. Nat Microbiol, 8, 2023
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3OJU
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![BU of 3oju by Molmil](/molmil-images/mine/3oju) | Snapshot of the large fragment of DNA polymerase I from Thermus Aquaticus processing c5 modified thymidies | 分子名称: | 2'-deoxy-5-[(1-hydroxy-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)ethynyl]uridine 5'-(tetrahydrogen triphosphate), DNA (5'-D(*AP*AP*AP*AP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ... | 著者 | Marx, A, Diederichs, K, Obeid, S. | 登録日 | 2010-08-23 | 公開日 | 2010-12-15 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structural basis for the synthesis of nucleobase modified DNA by Thermus aquaticus DNA polymerase. Proc.Natl.Acad.Sci.USA, 107, 2010
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