PDB: 9760 件ウェブページステータス検索Chemie searchBIRD

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4I3S	Crystal structure of the outer domain of HIV-1 gp120 in complex with VRC-PG04 space group P21 分子名称: CALCIUM ION, Heavy chain of VRC-PG04 Fab, Light chain of VRC-PG04 Fab, ... 著者 Joyce, M.G, Biertumpfel, C, Nabel, G.J, Kwong, P.D. 登録日 2012-11-26 公開日 2013-01-09 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Outer Domain of HIV-1 gp120: Antigenic Optimization, Structural Malleability, and Crystal Structure with Antibody VRC-PG04. J.Virol., 87, 2013
7T9J	Cryo-EM structure of the SARS-CoV-2 Omicron spike protein 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein 著者 Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Tuttle, K.S, Subramaniam, S. 登録日 2021-12-19 公開日 2021-12-29 最終更新日 2022-05-18 実験手法 ELECTRON MICROSCOPY (2.79 Å) 主引用文献 SARS-CoV-2 Omicron variant: Antibody evasion and cryo-EM structure of spike protein-ACE2 complex. Science, 375, 2022
7T9K	Cryo-EM structure of SARS-CoV-2 Omicron spike protein in complex with human ACE2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ... 著者 Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Tuttle, K.S, Subramaniam, S. 登録日 2021-12-19 公開日 2021-12-29 最終更新日 2022-05-18 実験手法 ELECTRON MICROSCOPY (2.45 Å) 主引用文献 SARS-CoV-2 Omicron variant: Antibody evasion and cryo-EM structure of spike protein-ACE2 complex. Science, 375, 2022
3NN8	Crystal structure of engineered antibody fragment based on 3D5 分子名称: Engineered scFv 著者 Lieberman, R.L, Maynard, J.A, Drury, J.E, Pai, J, Culver, J.A. 登録日 2010-06-23 公開日 2011-06-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Peptide-binding single chain Antibody fragment (SCFV) chaperones for protein co-crystallization To be Published
7T9L	Cryo-EM structure of SARS-CoV-2 Omicron spike protein in complex with human ACE2 (focused refinement of RBD and ACE2) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, Spike glycoprotein 著者 Zhu, X, Mannar, D, Saville, J.W, Srivastava, S.S, Berezuk, A.M, Tuttle, K.S, Subramaniam, S. 登録日 2021-12-19 公開日 2021-12-29 最終更新日 2022-07-13 実験手法 ELECTRON MICROSCOPY (2.66 Å) 主引用文献 SARS-CoV-2 Omicron variant: Antibody evasion and cryo-EM structure of spike protein-ACE2 complex. Science, 375, 2022
4NM8	Crystal structure of broadly neutralizing antibody CR8043 bound to H3 influenza hemagglutinin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody CR8043, ... 著者 Lee, P.S, Wilson, I.A. 登録日 2013-11-14 公開日 2013-12-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (4.0041 Å) 主引用文献 A common solution to group 2 influenza virus neutralization. Proc.Natl.Acad.Sci.USA, 111, 2014
2LP7	Structure of gp41-M-MAT, a membrane associated MPER trimer from HIV-1 gp41. 分子名称: Envelope glycoprotein 著者 Reardon, P.N. 登録日 2012-02-03 公開日 2013-02-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure of an HIV-1-neutralizing antibody target, the lipid-bound gp41 envelope membrane proximal region trimer. Proc.Natl.Acad.Sci.USA, 111, 2014
5WAV	Fc AbVance: Increasing our knowledge of antibody structural space to enable faster and better decision-making in antibody drug discovery. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Immunoglobulin gamma-1 heavy chain,Immunoglobulin gamma-1 heavy chain 著者 Williams, S.P, Reid, R.A, Convery, M.A. 登録日 2017-06-27 公開日 2017-11-08 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 AbVance: Increasing our knowledge of antibody structural space to enable faster and better decision-making in antibody drug discovery. To Be Published
8JIO	XBB spike protein (S) in complex with monoclonal antibody 6I18 分子名称: 6I18 heavy chain, 6I18 light chain, Spike glycoprotein 著者 Ma, Y, Mao, Q, Wang, Y, Zhang, Z. 登録日 2023-05-27 公開日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structure of XBB spike protein (S) in complex with monoclonal antibody 6I18 at 3.30 Angstroms resolution. To Be Published
2M7W	Independently verified structure of gp41-M-MAT, a membrane associated MPER trimer from HIV-1 gp41 分子名称: Envelope glycoprotein 著者 Martin, J.W, Reardon, P.N, Sage, H.S, Moses, D.S, Munir, A.S, Haynes, B.F, Spicer, L.D, Donald, B.R. 登録日 2013-05-01 公開日 2013-05-15 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structure of an HIV-1-neutralizing antibody target, the lipid-bound gp41 envelope membrane proximal region trimer. Proc.Natl.Acad.Sci.USA, 111, 2014
5IHZ	Crystal structure of anti-gliadin 1002-1E01 Fab fragment 分子名称: 1E01 Fab fragment heavy chain, 1E01 Fab fragment light chain 著者 Snir, O, Chen, X, Gidoni, M, du Pre, M.F, Zhao, Y, Steinsbo, O, Lundin, K.E, Yaari, G, Sollid, L.M. 登録日 2016-03-01 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Stereotyped antibody responses target posttranslationally modified gluten in celiac disease. JCI Insight, 2, 2017
5WYM	Crystal structure of an anti-connexin26 scFv 分子名称: anti-connexin26 scFv,Ig heavy chain,Linker,anti-connexin26 scFv,Ig light chain 著者 Li, S, Xu, L. 登録日 2017-01-13 公開日 2018-01-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Design and Characterization of a Human Monoclonal Antibody that Modulates Mutant Connexin 26 Hemichannels Implicated in Deafness and Skin Disorders Front Mol Neurosci, 10, 2017
8KGZ	Crystal structure of single-chain Fv antibody against antigen peptide from SARS-CoV2 S-spike protein 分子名称: Thioredoxin 1,scFv 著者 Ma, Q.Q, Zhang, B.L, Cheng, X.Y, Huang, Y.Q, Su, Z.D. 登録日 2023-08-20 公開日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Crystal structure of sheep scFv antibody against an antigen peptide of SARS-CoV2 S-spike protein To Be Published
5IJK	Crystal structure of anti-gliadin 1002-1E03 Fab fragment in complex of peptide PLQPEQPFP 分子名称: 1E03 Fab fragment heavy chain, 1E03 Fab fragment light chain, SULFATE ION, ... 著者 Snir, O, Chen, X, Gidoni, M, du Pre, M.F, Zhao, Y, Steinsbo, O, Lundin, K.E, Yaari, G, Sollid, L.M. 登録日 2016-03-02 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Stereotyped antibody responses target posttranslationally modified gluten in celiac disease. JCI Insight, 2, 2017
7M8L	EBOV GP bound to rEBOV-442 and rEBOV-515 Fabs 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Virion spike glycoprotein 1, ... 著者 Murin, C.D, Ward, A.B. 登録日 2021-03-30 公開日 2021-11-10 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Pan-ebolavirus protective therapy by two multifunctional human antibodies. Cell, 184, 2021
5IFJ	Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPEQPFP 分子名称: 1E01 Fab fragment heavy chain, 1E01 Fab fragment light chain, SULFATE ION, ... 著者 Snir, O, Chen, X, Gidoni, M, du Pre, M.F, Zhao, Y, Steinsbo, O, Lundin, K.E, Yaari, G, Sollid, L.M. 登録日 2016-02-26 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Stereotyped antibody responses target posttranslationally modified gluten in celiac disease. JCI Insight, 2, 2017
1YEH	STRUCTURE OF IGG2A FAB FRAGMENT 分子名称: FAB FRAGMENT, ZINC ION 著者 Gigant, B, Knossow, M. 登録日 1997-05-29 公開日 1997-12-03 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 X-ray structures of a hydrolytic antibody and of complexes elucidate catalytic pathway from substrate binding and transition state stabilization through water attack and product release. Proc.Natl.Acad.Sci.USA, 94, 1997
7REW	Crystal Structure of IL-13 in complex with MMAb3 Fab 分子名称: IL13, anti-cyno interleukin 13 Fab heavy chain, anti-cyno interleukin 13 Fab light chain 著者 Sudom, A, Min, X. 登録日 2021-07-13 公開日 2022-05-25 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Development of a potent high-affinity human therapeutic antibody via novel application of recombination signal sequence-based affinity maturation. J.Biol.Chem., 298, 2022
3N9G	Crystal structure of the Fab fragment of the human neutralizing anti-West Nile Virus MAb CR4354 分子名称: Fab fragment of MAb CR4354, heavy chain, light chain 著者 Kaufmann, B, Rossmann, M.G. 登録日 2010-05-29 公開日 2010-11-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.434 Å) 主引用文献 Neutralization of West Nile virus by cross-linking of its surface proteins with Fab fragments of the human monoclonal antibody CR4354. Proc.Natl.Acad.Sci.USA, 107, 2010
5SY8	Crystal structure of the complex of 10E8 Fab light chain mutant1 and T117v2 HIV-1 MPER scaffold 分子名称: 10E8 EPITOPE SCAFFOLD T117v2, 10E8 FAB HEAVY CHAIN, 10E8 FAB LIGHT CHAIN, ... 著者 Irimia, A, Wilson, I.A. 登録日 2016-08-10 公開日 2017-03-08 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Lipid interactions and angle of approach to the HIV-1 viral membrane of broadly neutralizing antibody 10E8: Insights for vaccine and therapeutic design. PLoS Pathog., 13, 2017
4ODX	4E10 germline encoded precursor no.7 in complex with epitope scaffold T117 分子名称: 4E10 epitope scaffold T117, GEP7 Fv heavy chain, GEP7 Fv light chain 著者 Finton, K.A.K. 登録日 2014-01-10 公開日 2014-10-08 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10. Plos Pathog., 10, 2014
5IG7	Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP 分子名称: 1E01 Fab fragment heavy chain, 1E01 Fab fragment light chain, SULFATE ION, ... 著者 Snir, O, Chen, X, Gidoni, M, du Pre, M.F, Zhao, Y, Steinsbo, O, Lundin, K.E, Yaari, G, Sollid, L.M. 登録日 2016-02-27 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Stereotyped antibody responses target posttranslationally modified gluten in celiac disease. JCI Insight, 2, 2017
2ARJ	CD8alpha-alpha in complex with YTS 105.18 Fab 分子名称: T-cell surface glycoprotein CD8 alpha chain, YTS 105.18 antigen binding region Heavy chain, YTS 105.18 antigen binding region Light chain 著者 Shore, D.A, Teyton, L, Dwek, R.A, Rudd, P.M, Wilson, I.A. 登録日 2005-08-19 公開日 2006-05-30 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.88 Å) 主引用文献 Crystal structure of the TCR co-receptor CD8alphaalpha in complex with monoclonal antibody YTS 105.18 Fab fragment at 2.88 A resolution. J.Mol.Biol., 358, 2006
5Y9F	Crystal structure of HPV59 pentamer in complex with the Fab fragment of antibody 28F10 分子名称: Major capsid protein L1, heavy chain of Fab fragment of antibody 28F10, light chains of Fab fragment of antibody 28F10 著者 Li, S.W, Li, Z.H. 登録日 2017-08-24 公開日 2017-10-25 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Crystal Structures of Two Immune Complexes Identify Determinants for Viral Infectivity and Type-Specific Neutralization of Human Papillomavirus. MBio, 8, 2017
5IK3	Crystal structure of anti-gliadin 1002-1E03 Fab fragment 分子名称: 1E03 Fab fragment heavy chain, 1E03 Fab fragment light chain, SULFATE ION 著者 Snir, O, Chen, X, Gidoni, M, du Pre, M.F, Zhao, Y, Steinsbo, O, Lundin, K.E, Yaari, G, Sollid, L.M. 登録日 2016-03-03 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Stereotyped antibody responses target posttranslationally modified gluten in celiac disease. JCI Insight, 2, 2017

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