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6WK7
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Crystal Structure Analysis of a poly(thymine) DNA duplex
分子名称: 1,3,5-triazine-2,4,6-triamine, DNA (5'-D(*TP*TP*TP*TP*TP*T)-3')
著者Li, Q, Zhao, J, Liu, L, Mandal, S, Rizzuto, F.J, He, H, Wei, S, Jonchhe, S, Sleiman, H.F, Mao, H, Mao, C.
登録日2020-04-15
公開日2020-07-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.423 Å)
主引用文献A poly(thymine)-melamine duplex for the assembly of DNA nanomaterials.
Nat Mater, 19, 2020
6HBT
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The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with arcaine
分子名称: 1-(4-carbamimidamidobutyl)guanidine, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SULFATE ION
著者Huang, L, Lilley, D.M.J.
登録日2018-08-13
公開日2019-02-20
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structure-guided design of a high-affinity ligand for a riboswitch.
Rna, 25, 2019
1OCI
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[3.2.0]bcANA:DNA
分子名称: 5'-D(*CP*TP*GP*A TLBP*AP*TP*GP*CP)-3', 5'-D(*GP*CP*AP*TP*AP*TP*CP*AP*GP)-3'
著者Tommerholt, H.V, Christensen, N.K, Nielsen, P, Wengel, J, Stein, P.C, Jacobsen, J.P, Petersen, M.
登録日2003-02-07
公開日2003-07-14
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Solution Structure of a DsDNA Containing a Bicyclic D-Arabino-Configured Nucleotide Fixed in an O4'-Endo Sugar Conformation
Org.Biomol.Chem., 1, 2003
6ITC
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BU of 6itc by Molmil
Structure of a substrate engaged SecA-SecY protein translocation machine
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
著者Ma, C.Y, Wu, X.F, Sun, D.J, Park, E.Y, Rapoport, T.A, Gao, N, Long, L.
登録日2018-11-21
公開日2019-06-12
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structure of the substrate-engaged SecA-SecY protein translocation machine.
Nat Commun, 10, 2019
6IO0
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BU of 6io0 by Molmil
Human IDH1 R132C mutant complexed with compound A.
分子名称: (2E)-3-{3-[3-(2,6-dichlorophenyl)-5-(propan-2-yl)-1,2-oxazole-4-carbonyl]-1-methyl-1H-indol-7-yl}prop-2-enoic acid, CITRIC ACID, GLYCEROL, ...
著者Suzuki, M, Baba, D, Hanzawa, H.
登録日2018-10-29
公開日2019-10-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Potent Blood-Brain Barrier-Permeable Mutant IDH1 Inhibitor Suppresses the Growth of Glioblastoma with IDH1 Mutation in a Patient-Derived Orthotopic Xenograft Model.
Mol.Cancer Ther., 19, 2020
6JCI
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BU of 6jci by Molmil
Crystal structure of Prolyl Endopeptidase from Haliotis discus hannai with SUAM-14746
分子名称: 1-[4-oxidanyl-2-(1,3-thiazolidin-3-ylcarbonyl)pyrrolidin-1-yl]-4-[2-[(~{E})-2-phenylethenyl]phenoxy]butan-1-one, GLYCEROL, Prolyl endopeptidase
著者Li, W, Cao, M.
登録日2019-01-28
公開日2020-02-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.493 Å)
主引用文献Crystal structure of Haliotis discus hannai Prolyl Endopeptidase
To Be Published
6JT2
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BU of 6jt2 by Molmil
Structure of human soluble guanylate cyclase in the NO activated state
分子名称: Guanylate cyclase soluble subunit alpha-1, Guanylate cyclase soluble subunit beta-1, MAGNESIUM ION, ...
著者Chen, L, Kang, Y, Liu, R, Wu, J.-X.
登録日2019-04-08
公開日2019-09-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into the mechanism of human soluble guanylate cyclase.
Nature, 574, 2019
1A9L
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BU of 1a9l by Molmil
SOLUTION STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF, NMR, 12 STRUCTURES
分子名称: PRE-TRNA BULGE-HELIX-BULGE MOTIF
著者Diener, J.L, Moore, P.B.
登録日1998-04-07
公開日1998-06-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a substrate for the archaeal pre-tRNA splicing endonucleases: the bulge-helix-bulge motif.
Mol.Cell, 1, 1998
6JG1
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BU of 6jg1 by Molmil
Crystal structure of barley exohydrolaseI wildtype in complex with 4I,4III,4V-S-trithiocellohexaose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Barley exohydrolase I, GLYCEROL, ...
著者Luang, S, Streltsov, V.A, Hrmova, M.
登録日2019-02-13
公開日2020-08-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
6JEQ
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Crystal structure of Pullulanase from Paenibacillus barengoltzii complex with beta-cyclodextrin
分子名称: CALCIUM ION, CHLORIDE ION, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), ...
著者Wu, S.W, Yang, S.Q, Qin, Z, You, X, Huang, P, Jiang, Z.Q.
登録日2019-02-07
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Structural basis of carbohydrate binding in domain C of a type I pullulanase from Paenibacillus barengoltzii.
Acta Crystallogr D Struct Biol, 76, 2020
6IX9
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The structure of LepI C52A in complex with SAM and leporin C
分子名称: (6R,6aS,10S,10aR)-10-methyl-4-phenyl-6-[(1E)-prop-1-en-1-yl]-2,6,6a,7,8,9,10,10a-octahydro-1H-[2]benzopyrano[4,3-c]pyridin-1-one, CHLORIDE ION, GLYCEROL, ...
著者Cai, Y, Ohashi, M, Hai, Y, Tang, Y, Zhou, J.
登録日2018-12-09
公開日2019-07-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.776 Å)
主引用文献Structural basis for stereoselective dehydration and hydrogen-bonding catalysis by the SAM-dependent pericyclase LepI.
Nat.Chem., 11, 2019
2A9L
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BU of 2a9l by Molmil
SOLUTION NMR STRUCTURE OF A SUBSTRATE FOR THE ARCHAEAL PRE-TRNA SPLICING ENDONUCLEASES: THE BULGE-HELIX-BULGE MOTIF, MINIMIZED AVERAGE STRUCTURE
分子名称: ABISS7 RNA
著者Diener, J.L, Moore, P.B.
登録日1998-04-07
公開日1998-06-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of a substrate for the archaeal pre-tRNA splicing endonucleases: the bulge-helix-bulge motif.
Mol.Cell, 1, 1998
6J8M
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BU of 6j8m by Molmil
Low-dose structure of bovine heart cytochrome c oxidase in the fully oxidized state determined using 30 keV X-ray
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Ueno, G, Shimada, A, Yamashita, E, Hasegawa, K, Kumasaka, T, Shinzawa-Itoh, K, Yoshikawa, S, Tsukihara, T, Yamamoto, M.
登録日2019-01-20
公開日2019-06-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Low-dose X-ray structure analysis of cytochrome c oxidase utilizing high-energy X-rays.
J.Synchrotron Radiat., 26, 2019
4UM3
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BU of 4um3 by Molmil
Engineered Ls-AChBP with alpha4-alpha4 binding pocket in complex with NS3920
分子名称: 1-(6-bromopyridin-3-yl)-1,4-diazepane, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE BINDING PROTEIN, ...
著者Shahsavar, A, Kastrup, J.S, Balle, T, Gajhede, M.
登録日2014-05-14
公開日2015-07-22
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Achbp Engineered to Mimic the Alpha4-Alpha4 Binding Pocket in Alpha4Beta2 Nicotinic Acetylcholine Receptors Reveals Interface Specific Interactions Important for Binding and Activity
Mol.Pharmacol., 88, 2015
6HC5
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BU of 6hc5 by Molmil
The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with audouine
分子名称: 1-(5-carbamimidamidopentyl)guanidine, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2018-08-14
公開日2019-02-20
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.413 Å)
主引用文献Structure-guided design of a high-affinity ligand for a riboswitch.
Rna, 25, 2019
6O89
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BU of 6o89 by Molmil
Anti-CD28xCD3 CODV Fab
分子名称: Anti-CD28xCD3 CODV-Fab Heavy chain, Anti-CD28xCD3 CODV-Fab Light chain
著者Lord, D.M, Wei, R.R.
登録日2019-03-09
公開日2019-11-20
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Trispecific antibodies enhance the therapeutic efficacy of tumor-directed T cells through T cell receptor co-stimulation
Nat Cancer, 1, 2020
5YU5
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BU of 5yu5 by Molmil
Crystal structure of shaft pilin spaD from Lactobacillus rhamnosus GG
分子名称: Pilus assembly protein
著者Chaurasia, P, Pratap, S, Palva, A, von Ossowski, I, Krishnan, V.
登録日2017-11-20
公開日2018-06-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Bent conformation of a backbone pilin N-terminal domain supports a three-stage pilus assembly mechanism.
Commun Biol, 1, 2018
5Z0Z
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BU of 5z0z by Molmil
Crystal structure of shaft pilin spaD from Lactobacillus rhamnosus GG - D242A mutant
分子名称: Pilus assembly protein
著者Chaurasia, P, Pratap, S, Palva, A, von Ossowski, I, Krishnan, V.
登録日2017-12-22
公開日2018-06-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Bent conformation of a backbone pilin N-terminal domain supports a three-stage pilus assembly mechanism.
Commun Biol, 1, 2018
4DZL
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BU of 4dzl by Molmil
A de novo designed Coiled Coil CC-Tri
分子名称: COILED-COIL PEPTIDE CC-TRI
著者Bruning, M, Thomson, A.R, Zaccai, N.R, Brady, R.L, Woolfson, D.N.
登録日2012-03-01
公開日2012-08-29
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献A basis set of de novo coiled-coil Peptide oligomers for rational protein design and synthetic biology.
ACS Synth Biol, 1, 2012
1YL8
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3D Solution Structure of [Tyr3]Octreotate derivatives in DMSO
分子名称: [Tyr3]Octreotate peptide
著者Spyroulias, G.A, Galanis, A.S, Petrou, C, Vahliotis, D, Sotiriou, P, Nikolopoulou, A, Nock, B, Maina, T, Cordopatis, P.
登録日2005-01-19
公開日2005-09-20
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献3D solution structure of [Tyr3]octreotate derivatives in DMSO: structure differentiation of peptide core due to chelate group attachment and biologically active conformation.
Med.Chem., 1, 2005
1YL9
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3D Solution Structure of [Tyr3]Octreotate derivatives in DMSO
分子名称: 3-[(2-AMINOETHYL)AMINO]-2-{[(2-AMINOETHYL)AMINO]METHYL}PROPANAL, [Tyr3]Octreotate
著者Spyroulias, G.A, Galanis, A.S, Petrou, C, Vahliotis, D, Sotiriou, P, Nikolopoulou, A, Nock, B, Maina, T, Cordopatis, P.
登録日2005-01-19
公開日2005-09-20
最終更新日2024-11-20
実験手法SOLUTION NMR
主引用文献3D solution structure of [Tyr3]octreotate derivatives in DMSO: structure differentiation of peptide core due to chelate group attachment and biologically active conformation.
Med.Chem., 1, 2005
9NT4
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BU of 9nt4 by Molmil
Crystal structure of ecLacI transcription factor ancestor 1 bound to d-fucose
分子名称: LacI Transcription Factor, beta-D-fucopyranose
著者Georgelin, R.L, Frkic, R.L, Jackson, C.J.
登録日2025-03-18
公開日2025-06-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of ecLacI transcription factor ancestor 1 bound to d-fucose
To Be Published
9OK9
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Crystal structure of an MKP5 allosteric loop mutant, P447V, in complex with an allosteric inhibitor
分子名称: 3,3-dimethyl-1-{[9-(methylsulfanyl)-5,6-dihydrothieno[3,4-h]quinazolin-2-yl]sulfanyl}butan-2-one, Dual specificity protein phosphatase 10
著者Manjula, R, Bennett, A.M, Lolis, E.
登録日2025-05-09
公開日2025-07-30
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of an MKP5 allosteric loop mutant, S446G, in complex with an allosteric inhibitor
To Be Published
9NO3
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The bifunctional arabinofuranosidase/xylosidase from metagenome of Pseudacanthotermes militaris.
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, GLYCEROL, ...
著者Gomes, B.M, De Oliveira, G.S, de Melo, V.S, Rossini, N.O, Dias, M.V.B, Chambergo, F.S.
登録日2025-03-07
公開日2025-10-08
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural and functional characterization of a bifunctional GH43 alpha-L-arabinofuranosidase/ beta-xylosidase from the metagenome of Pseudacanthotermes militaris gut.
Int.J.Biol.Macromol., 2025
9NKB
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Structure of Candida albicans trehalose-6-phosphate synthase in complex with SJ6675
分子名称: (4P)-4-(furan-3-yl)-1,3-thiazol-2-amine, Alpha,alpha-trehalose-phosphate synthase [UDP-forming]
著者Schaefer, M, Washington, E.J, Brennan, R.G.
登録日2025-02-28
公開日2025-08-20
最終更新日2025-09-10
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Inhibitors of trehalose-6-phosphate synthase activity in fungal pathogens compromise thermal tolerance pathways.
Mbio, 2025

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