PDB: 97814 件ウェブページステータス検索Chemie searchBIRD

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7L6B	The empty AAV12 capsid 分子名称: VP1 著者 Mietzsch, M, Agbandje-McKenna, M. 登録日 2020-12-23 公開日 2021-02-03 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.54 Å) 主引用文献 Completion of the AAV Structural Atlas: Serotype Capsid Structures Reveals Clade-Specific Features. Viruses, 13, 2021
7L6A	The genome-containing AAV12 capsid 分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, VP1 著者 Mietzsch, M, Agbandje-McKenna, M. 登録日 2020-12-23 公開日 2021-02-03 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.67 Å) 主引用文献 Completion of the AAV Structural Atlas: Serotype Capsid Structures Reveals Clade-Specific Features. Viruses, 13, 2021
7L6E	The genome-containing AAV11 capsid 分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein 著者 Mietzsch, M, Agbandje-McKenna, M. 登録日 2020-12-23 公開日 2021-02-03 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.15 Å) 主引用文献 Completion of the AAV Structural Atlas: Serotype Capsid Structures Reveals Clade-Specific Features. Viruses, 13, 2021
2OJV	Crystal structure of a ternary complex of goat lactoperoxidase with cyanide and iodide ions at 2.4 A resolution 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CARBONATE ION, ... 著者 Singh, A.K, Singh, N, Singh, S.B, Sharma, S, Kaur, P, Singh, T.P. 登録日 2007-01-15 公開日 2007-01-30 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of a ternary complex of goat lactoperoxidase with cyanide and iodide ions at 2.4 A resolution To be Published
2YPQ	3-deoxy-D-arabino-heptulosonate 7-phosphate synthase with tryptophan and tyrosine bound 分子名称: CHLORIDE ION, GLYCEROL, MANGANESE (II) ION, ... 著者 Blackmore, N.J, Reichau, S, Jiao, W, Hutton, R.D, Baker, E.N, Jameson, G.B, Parker, E.J. 登録日 2012-10-31 公開日 2013-01-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.76 Å) 主引用文献 Three Sites and You are Out: Ternary Synergistic Allostery Controls Aromatic Aminoacid Biosynthesis in Mycobacterium Tuberculosis. J.Mol.Biol., 425, 2013
5ETH	RORy in complex with inverse agonist 3. 分子名称: 1-methyl-~{N}-(1-thiophen-2-ylcarbonyl-3,4-dihydro-2~{H}-quinolin-6-yl)-~{N}-[2,2,2-tris(fluoranyl)ethyl]indole-4-sulfonamide, Nuclear receptor ROR-gamma 著者 Marcotte, D.M. 登録日 2015-11-17 公開日 2016-04-27 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.803 Å) 主引用文献 Discovery of biaryls as ROR gamma inverse agonists by using structure-based design. Bioorg.Med.Chem.Lett., 26, 2016
5EW1	Human thrombin sandwiched between two DNA aptamers: HD22 and HD1-deltaT3 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, HD1-deltaT3, ... 著者 Pica, A, Russo Krauss, I, Parente, V, Sica, F. 登録日 2015-11-20 公開日 2016-11-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Through-bond effects in the ternary complexes of thrombin sandwiched by two DNA aptamers. Nucleic Acids Res., 45, 2017
5EW2	Human thrombin sandwiched between two DNA aptamers: HD22 and HD1-deltaT12 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, HD1-deltaT12, ... 著者 Pica, A, Russo Krauss, I, Parente, V, Sica, F. 登録日 2015-11-20 公開日 2016-11-30 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.59 Å) 主引用文献 Through-bond effects in the ternary complexes of thrombin sandwiched by two DNA aptamers. Nucleic Acids Res., 45, 2017
5F3F	Crystal structure of para-biphenyl-2-methyl-3'-methyl amide mannoside bound to FimH lectin domain 分子名称: 3-[4-[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3-methyl-phenyl]-~{N}-methyl-benzamide, Protein FimH 著者 Klein, R.D, Hultgren, S.J. 登録日 2015-12-02 公開日 2016-12-07 最終更新日 2024-01-03 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Antivirulence C-Mannosides as Antibiotic-Sparing, Oral Therapeutics for Urinary Tract Infections. J.Med.Chem., 59, 2016
1IA3	Candida albicans dihydrofolate reductase complex in which the dihydronicotinamide moiety of dihydro-nicotinamide-adenine-dinucleotide phosphate (NADPH) is displaced by 5-[(4-TERT-BUTYLPHENYL)SULFANYL]-2,4-QUINAZOLINEDIAMINE (GW995) 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-[4-TERT-BUTYLPHENYLSULFANYL]-2,4-QUINAZOLINEDIAMINE, DIHYDROFOLATE REDUCTASE, ... 著者 Whitlow, M, Howard, A.J, Kuyper, L.F. 登録日 2001-03-22 公開日 2001-04-11 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 X-ray Crystal Structures of Candida albicans Dihydrofolate Reductase: High Resolution Ternary Complexes in Which the Dihydronicotinamide Moiety of NADPH is Displaced by an inhibitor J.Med.Chem., 44, 2001
1IA4	Candida albicans dihydrofolate reductase complex in which the dihydronicotinamide moiety of dihydro-nicotinamide-adenine-dinucleotide phosphate (NADPH) is displaced by 5-{[4-(4-MORPHOLINYL)PHENYL]SULFANYL}-2,4-QUINAZOLINEDIAMIN (GW2021) 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5-(4-MORPHOLIN-4-YL-PHENYLSULFANYL)-2,4-QUINAZOLINEDIAMINE, DIHYDROFOLATE REDUCTASE, ... 著者 Whitlow, M, Howard, A.J, Kuyper, L.F. 登録日 2001-03-22 公開日 2001-04-11 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 X-ray Crystal Structures of Candida albicans Dihydrofolate Reductase: High Resolution Ternary Complexes in Which the Dihydronicotinamide Moiety of NADPH is Displaced by an inhibitor J.Med.Chem., 44, 2001
5G3M	Discovery of a novel secreted phospholipase A2 (sPLA2) inhibitor. 分子名称: 4-BENZYLBENZAMIDE, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... 著者 Sandmark, J, Bodin, C, Hallberg, K. 登録日 2016-04-29 公開日 2016-09-14 最終更新日 2018-04-04 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Discovery of Azd2716: A Novel Secreted Phospholipase A2 (Spla2) Inhibitor for the Treatment of Coronary Artery Disease Acs Med.Chem.Lett., 7, 2016
5GIQ	Xaa-Pro peptidase from Deinococcus radiodurans, Zinc bound 分子名称: PHOSPHATE ION, Proline dipeptidase, ZINC ION 著者 Are, V.N, Singh, R, Kumar, A, Ghosh, B, Jamdar, S.N, Makde, R.D. 登録日 2016-06-24 公開日 2017-06-28 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases. Proteins, 2018
5GAL	CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH N-ACETYLLACTOSAMINE 分子名称: GALECTIN-7, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Leonidas, D.D, Acharya, K.R. 登録日 1998-07-14 公開日 1998-11-04 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis for the recognition of carbohydrates by human galectin-7. Biochemistry, 37, 1998
5GVC	Human Topoisomerase IIIb topo domain 分子名称: DNA topoisomerase 3-beta-1, MAGNESIUM ION 著者 Goto-Ito, S, Yamagata, A, Sato, Y, Takahashi, T.S, Fukai, S. 登録日 2016-09-05 公開日 2017-06-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.436 Å) 主引用文献 Structural basis of the interaction between Topoisomerase III beta and the TDRD3 auxiliary factor Sci Rep, 7, 2017
5G36	Yellow form of Halorhodopsin from Halobacterium salinarum in a new rhombohedral crystal form 分子名称: CHLORIDE ION, HALORHODOPSIN, RETINAL, ... 著者 Schreiner, M, Schlesinger, R, Heberle, J, Niemann, H.H. 登録日 2016-04-20 公開日 2016-08-31 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Crystal Structure of Halobacterium Salinarum Halorhodopsin with Partially Depopulated Primary Chloride Binding Site Acta Crystallogr.,Sect.F, 72, 2016
7P27	NMR solution structure of Chikungunya virus macro domain 分子名称: Polyprotein P1234 著者 Lykouras, M.V, Tsika, A.C, Papageorgiou, N, Canard, B, Coutard, B, Bentrop, D, Spyroulias, G.A. 登録日 2021-07-04 公開日 2022-07-13 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Binding Adaptation of GS-441524 Diversifies Macro Domains and Downregulates SARS-CoV-2 de-MARylation Capacity. J.Mol.Biol., 434, 2022
5GMT	Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai 分子名称: Alginate lyase 著者 Qin, H.-M, Miyakawa, T, Nakamura, A, Tanokura, M. 登録日 2016-07-16 公開日 2017-01-04 最終更新日 2020-02-26 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structure and Polymannuronate Specificity of a Eukaryotic Member of Polysaccharide Lyase Family 14. J. Biol. Chem., 292, 2017
5GVD	Human TDRD3 DUF1767-OB domains 分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Goto-Ito, S, Yamagata, A, Sato, Y, Takahashi, T.S, Fukai, S. 登録日 2016-09-05 公開日 2017-06-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.623 Å) 主引用文献 Structural basis of the interaction between Topoisomerase III beta and the TDRD3 auxiliary factor Sci Rep, 7, 2017
1C6Y	ALTERNATE BINDING SITE FOR THE P1-P3 GROUP OF A CLASS OF POTENT HIV-1 PROTEASE INHIBITORS AS A RESULT OF CONCERTED STRUCTURAL CHANGE IN 80'S LOOP. 分子名称: N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, PROTEIN (PROTEASE) 著者 Munshi, S. 登録日 1999-12-28 公開日 2000-12-28 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 An alternate binding site for the P1-P3 group of a class of potent HIV-1 protease inhibitors as a result of concerted structural change in the 80s loop of the protease. Acta Crystallogr.,Sect.D, 56, 2000
6RM1	Human Carbonic Anhydrase II in complex with fragment. 分子名称: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 3-methylbenzohydrazide, Carbonic anhydrase 2, ... 著者 Gloeckner, S, Heine, A, Klebe, G. 登録日 2019-05-03 公開日 2020-04-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II. Biomolecules, 10, 2020
6RMP	Human Carbonic Anhydrase II in complex with fragment. 分子名称: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 3-(dimethylamino)benzohydrazide, Carbonic anhydrase 2, ... 著者 Gloeckner, S, Heine, A, Klebe, G. 登録日 2019-05-07 公開日 2020-04-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.22 Å) 主引用文献 A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II. Biomolecules, 10, 2020
5OF3	Crystal structure of the heterotrimeric PriSLX primase from S. solfataricus. 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA primase large subunit PriL, DNA primase small subunit PriS, ... 著者 Pellegrini, L, Holzer, S. 登録日 2017-07-10 公開日 2017-11-29 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.906 Å) 主引用文献 Primer synthesis by a eukaryotic-like archaeal primase is independent of its Fe-S cluster. Nat Commun, 8, 2017
7R57	Escherichia coli type II Asparaginase N24S mutant in its apo form 分子名称: L-asparaginase 2 著者 Maggi, M, Scotti, C. 登録日 2022-02-10 公開日 2022-09-14 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structural Aspects of E. coli Type II Asparaginase in Complex with Its Secondary Product L-Glutamate. Int J Mol Sci, 23, 2022
5GVE	Human TOP3B-TDRD3 complex 分子名称: DNA topoisomerase 3-beta-1, MAGNESIUM ION, Tudor domain-containing protein 3 著者 Goto-Ito, S, Yamagata, A, Sato, Y, Takahashi, T.S, Fukai, S. 登録日 2016-09-05 公開日 2017-06-14 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.606 Å) 主引用文献 Structural basis of the interaction between Topoisomerase III beta and the TDRD3 auxiliary factor Sci Rep, 7, 2017

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