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1VFM
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Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase 2/alpha-cyclodextrin complex
分子名称: CALCIUM ION, Cyclic beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), ...
著者Ohtaki, A, Mizuno, M, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2004-04-16
公開日2005-02-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism
J.BIOL.CHEM., 279, 2004
1VFU
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Crystal structure of Thermoactinomyces vulgaris R-47 amylase 2/gamma-cyclodextrin complex
分子名称: CALCIUM ION, Cyclooctakis-(1-4)-(alpha-D-glucopyranose), Neopullulanase 2
著者Ohtaki, A, Mizuno, M, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2004-04-19
公開日2005-02-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism
J.BIOL.CHEM., 279, 2004
1VTI
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DNA-DRUG INTERACTIONS: THE CRYSTAL STRUCTURES OF D(TGATCA) COMPLEXED WITH DAUNOMYCIN
分子名称: DAUNOMYCIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
著者Nunn, C.M, Van Meervelt, L, Zhang, S, Moore, M.H, Kennard, O.
登録日1992-03-01
公開日2011-07-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献DNA-Drug Interactions: The Crystal Structures of d(TGTACA) and d(TGATCA) Complexed with Daunomycin
J.Mol.Biol., 222, 1991
282D
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A CONTINOUS TRANSITION FROM A-DNA TO B-DNA IN THE 1:1 COMPLEX BETWEEN NOGALAMYCIN AND THE HEXAMER DCCCGGG
分子名称: DNA (5'-D(*CP*CP*CP*GP*GP*G)-3'), NOGALAMYCIN
著者Cruse, W, Saludjian, P, Leroux, Y, Leger, Y, El Manouni, D, Prange, T.
登録日1996-08-26
公開日1996-10-23
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A continuous transition from A-DNA to B-DNA in the 1:1 complex between nogalamycin and the hexamer dCCCGGG.
J.Biol.Chem., 271, 1996
2D0H
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Crystal Structure of Thermoactinomyces vulgaris R-47 Alpha-Amylase 1 (TVAI) Mutant D356N/E396Q complexed with P2, a pullulan model oligosaccharide
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Abe, A, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2005-08-02
公開日2006-07-11
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Complexes of Thermoactinomyces vulgaris R-47 alpha-amylase 1 and pullulan model oligossacharides provide new insight into the mechanism for recognizing substrates with alpha-(1,6) glycosidic linkages
Febs J., 272, 2005
2VCD
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Solution structure of the FKBP-domain of Legionella pneumophila Mip in complex with rapamycin
分子名称: Outer membrane protein MIP, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
著者Ceymann, A, Horstmann, M, Ehses, P, Schweimer, K, Paschke, A.-K, Fischer, G, Roesch, P, Faber, C.
登録日2007-09-20
公開日2008-09-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the Legionella pneumophila Mip-rapamycin complex.
BMC Struct. Biol., 8, 2008
1YFC
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Solution nmr structure of a yeast iso-1-ferrocytochrome C
分子名称: HEME C, YEAST ISO-1-FERROCYTOCHROME C
著者Baistrocchi, P, Banci, L, Bertini, I, Turano, P, Bren, K.L, Gray, H.B.
登録日1996-08-08
公開日1997-03-12
最終更新日2021-11-03
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of Saccharomyces cerevisiae reduced iso-1-cytochrome c.
Biochemistry, 35, 1996
1JR1
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Crystal structure of Inosine Monophosphate Dehydrogenase in complex with Mycophenolic Acid
分子名称: INOSINIC ACID, Inosine-5'-Monophosphate Dehydrogenase 2, MYCOPHENOLIC ACID, ...
著者Sintchak, M.D, Fleming, M.A, Futer, O, Raybuck, S.A, Chambers, S.P, Caron, P.R, Murcko, M.A, Wilson, K.P.
登録日2001-08-09
公開日2001-09-05
最終更新日2017-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure and mechanism of inosine monophosphate dehydrogenase in complex with the immunosuppressant mycophenolic acid.
Cell(Cambridge,Mass.), 85, 1996
1KAN
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MOLECULAR STRUCTURE OF KANAMYCIN NUCLEOTIDYLTRANSFERASE DETERMINED TO 3.0-ANGSTROMS RESOLUTION
分子名称: KANAMYCIN NUCLEOTIDYLTRANSFERASE
著者Holden, H.M, Rayment, I, Sakon, J.
登録日1993-08-13
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular structure of kanamycin nucleotidyltransferase determined to 3.0-A resolution.
Biochemistry, 32, 1993
7DBL
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Acyl-CoA hydrolase MpaH' mutant S139A in complex with MPA
分子名称: MYCOPHENOLIC ACID, acyl-CoA hydrolase MpaH'
著者Li, S.Y, You, C.
登録日2020-10-20
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for substrate specificity of the peroxisomal acyl-CoA hydrolase MpaH' involved in mycophenolic acid biosynthesis.
Febs J., 288, 2021
2GFI
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BU of 2gfi by Molmil
Crystal structure of the phytase from D. castellii at 2.3 A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, phytase
著者Hoh, F.
登録日2006-03-22
公開日2007-03-27
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structure of Debaryomyces castellii CBS 2923 phytase.
Acta Crystallogr.,Sect.F, 65, 2009
2D2O
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Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft
分子名称: CALCIUM ION, Neopullulanase 2, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Ohtaki, A, Mizuno, M, Yoshida, H, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2005-09-13
公開日2006-08-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of a complex of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with maltohexaose demonstrates the important role of aromatic residues at the reducing end of the substrate binding cleft
Carbohydr.Res., 341, 2006
3A6O
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Crystal structure of Thermoactinomyces vulgaris R-47 alpha-amylase 2/acarbose complex
分子名称: ACARBOSE DERIVED PENTASACCHARIDE, CALCIUM ION, Neopullulanase 2
著者Ohtaki, A, Mizuno, M, Tonozuka, T, Sakano, Y, Kamitori, S.
登録日2009-09-07
公開日2009-09-22
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Complex structures of Thermoactinomyces vulgaris R-47 alpha-amylase 2 with acarbose and cyclodextrins demonstrate the multiple substrate recognition mechanism
J.BIOL.CHEM., 279, 2004
5FB7
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Ligand binding domain 2 of Penicillium marneffei MP1 protein complexed with multiple arachidonic acids
分子名称: ARACHIDONIC ACID, Envelope glycoprotein
著者Lam, W.H, Zhang, H, Hao, Q.
登録日2015-12-14
公開日2016-12-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Talaromyces marneffei Mp1p Is a Virulence Factor that Binds and Sequesters a Key Proinflammatory Lipid to Dampen Host Innate Immune Response
Cell Chem Biol, 24, 2017
5ZI9
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Crystal structure of type-II LOG from Streptomyces coelicolor A3
分子名称: 1,2-ETHANEDIOL, CITRATE ANION, Cytokinin riboside 5'-monophosphate phosphoribohydrolase, ...
著者Seo, H, Kim, K.-J.
登録日2018-03-14
公開日2018-04-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and biochemical characterization of the type-II LOG protein from Streptomyces coelicolor A3.
Biochem. Biophys. Res. Commun., 499, 2018
4JAX
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BU of 4jax by Molmil
Crystal structure of dimeric KlHxk1 in crystal form X
分子名称: GLYCEROL, Hexokinase, PHOSPHATE ION
著者Kuettner, E.B, Strater, N, Kettner, K, Otto, A, Lilie, H, Golbik, R.P, Kriegel, T.M.
登録日2013-02-19
公開日2013-05-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献In vivo phosphorylation and in vitro autophosphorylation-inactivation of Kluyveromyces lactis hexokinase KlHxk1.
Biochem.Biophys.Res.Commun., 435, 2013
3U75
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Structure of E230A-fructofuranosidase from Schwanniomyces occidentalis complexed with fructosylnystose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fructofuranosidase, alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-beta-D-fructofuranose
著者Sainz-Polo, M.A, Sanz-Aparicio, J.
登録日2011-10-13
公開日2012-04-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Structural and kinetic insights reveal that the amino acid pair GLN228/ASN254 modulates the transfructosylating specificity of Schwanniomyces occidentalis beta-fructofuranosidase, an enzyme that produces prebiotics.
J.Biol.Chem., 287, 2012
4KR8
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Salmonella typhi OmpF complex with Daunomycin
分子名称: DAUNOMYCIN, Outer membrane protein F
著者Madhuranayaki, T, Balasubramaniam, D, Krishnaswamy, S.
登録日2013-05-16
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Salmonella typhi OmpF complex with Daunomycin
To be published
3U14
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Structure of D50A-fructofuranosidase from Schwanniomyces occidentalis complexed with inulin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fructofuranosidase, beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-beta-D-fructofuranose-(2-1)-beta-D-fructofuranose
著者Sainz-Polo, M.A, Sanz-Aparicio, J.
登録日2011-09-29
公開日2012-04-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structural and kinetic insights reveal that the amino acid pair GLN228/ASN254 modulates the transfructosylating specificity of Schwanniomyces occidentalis beta-fructofuranosidase, an enzyme that produces prebiotics.
J.Biol.Chem., 287, 2012
6AZ3
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Cryo-EM structure of of the large subunit of Leishmania ribosome bound to paromomycin
分子名称: 60S ribosomal protein L10, putative, 60S ribosomal protein L11 (L5, ...
著者Shalev-Benami, M, Zhang, Y, Rozenberg, H, Nobe, Y, Taoka, M, Matzov, D, Zimmerman, E, Bashan, A, Isobe, T, Jaffe, C.L, Yonath, A, Skiniotis, G.
登録日2017-09-09
公開日2017-12-06
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Atomic resolution snapshot of Leishmania ribosome inhibition by the aminoglycoside paromomycin.
Nat Commun, 8, 2017
6AZ1
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Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
分子名称: E-site tRNA, LACK1, MAGNESIUM ION, ...
著者Shalev-Benami, M, Zhang, Y, Rozenberg, H, Matzov, D, Zimmerman, E, Bashan, A, Jaffe, C.L, Yonath, A, Skiniotis, G.
登録日2017-09-09
公開日2017-12-06
最終更新日2019-07-03
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Atomic resolution snapshot of Leishmania ribosome inhibition by the aminoglycoside paromomycin.
Nat Commun, 8, 2017
7N7G
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Crystal Structure of FosB from Enterococcus faecium with Fosfomycin
分子名称: 1,2-ETHANEDIOL, FOSFOMYCIN, MANGANESE (II) ION, ...
著者Shay, M.R, Simmons, Z, Thompson, M.K.
登録日2021-06-10
公開日2022-07-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional characterization of fosfomycin resistance conferred by FosB from Enterococcus faecium.
Protein Sci., 31, 2022
7KBV
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Solution structure of the major MYC promoter G-quadruplex with a wild-type flanking sequence
分子名称: Myc2345
著者Dickerhoff, J, Yang, D.
登録日2020-10-03
公開日2021-06-23
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural recognition of the MYC promoter G-quadruplex by a quinoline derivative: insights into molecular targeting of parallel G-quadruplexes.
Nucleic Acids Res., 49, 2021
7T1Z
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Structure of the Fbw7-Skp1-MycNdegron complex
分子名称: F-box/WD repeat-containing protein 7, Myc proto-oncogene N terminal degron, S-phase kinase-associated protein 1, ...
著者Wang, B, Rusnac, D.V, Clurman, B.E, Zheng, N.
登録日2021-12-02
公開日2022-02-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Two diphosphorylated degrons control c-Myc degradation by the Fbw7 tumor suppressor.
Sci Adv, 8, 2022
7T1Y
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Structure of the Fbw7-Skp1-MycCdegron complex
分子名称: F-box/WD repeat-containing protein 7, Myc proto-oncogene protein C terminal degron, S-phase kinase-associated protein 1, ...
著者Wang, B, Rusnac, D.V, Clurman, B.E, Zheng, N.
登録日2021-12-02
公開日2022-02-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Two diphosphorylated degrons control c-Myc degradation by the Fbw7 tumor suppressor.
Sci Adv, 8, 2022

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