PDB: 183105 件ウェブページステータス検索Chemie searchBIRD

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1DV6	PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-NEUTRAL DQAQB STATE WITH THE PROTON TRANSFER INHIBITOR ZN2+ 分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CHLORIDE ION, ... 著者 Axelrod, H.L, Abresch, E.C, Paddock, M.L, Okamura, M.Y, Feher, G. 登録日 2000-01-19 公開日 2000-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Determination of the binding sites of the proton transfer inhibitors Cd2+ and Zn2+ in bacterial reaction centers. Proc.Natl.Acad.Sci.USA, 97, 2000
5SYE	Near-atomic resolution cryo-EM reconstruction of doubly bound Taxol- and peloruside-stabilized microtubule 分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kellogg, E.H, Nogales, E. 登録日 2016-08-10 公開日 2017-02-01 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Insights into the Distinct Mechanisms of Action of Taxane and Non-Taxane Microtubule Stabilizers from Cryo-EM Structures. J. Mol. Biol., 429, 2017
3IGU	Crystal structure of human alpha-N-acetylgalactosaminidase, covalent intermediate 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Clark, N.E, Garman, S.C. 登録日 2009-07-28 公開日 2009-10-20 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The 1.9 a structure of human alpha-N-acetylgalactosaminidase: The molecular basis of Schindler and Kanzaki diseases J.Mol.Biol., 393, 2009
1JPR	Mn substituted Ribonucleotide reductase R2 from E. coli oxidized by nitric oxide 分子名称: MANGANESE (II) ION, MERCURY (II) ION, Protein R2 of Ribonucleotide reductase 著者 Hogbom, M, Andersson, M.E, Nordlund, P. 登録日 2001-08-03 公開日 2001-08-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Crystal structures of oxidized dinuclear manganese centres in Mn-substituted class I ribonucleotide reductase from Escherichia coli: carboxylate shifts with implications for O2 activation and radical generation. J.Biol.Inorg.Chem., 6, 2001
4XOV	Structure of rsGreen0.7 in the green-off-state 分子名称: rsGreen0.7 著者 De Zitter, E, Van Meervelt, L. 登録日 2015-01-16 公開日 2015-09-09 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Expression-Enhanced Fluorescent Proteins Based on Enhanced Green Fluorescent Protein for Super-resolution Microscopy. Acs Nano, 9, 2015
5SYG	Cryo-EM reconstruction of zampanolide-bound microtubule 分子名称: (2Z,4E)-N-[(S)-[(1S,2E,5S,8E,10Z,17S)-3,11-dimethyl-19-methylidene-7,13-dioxo-6,21-dioxabicyclo[15.3.1]henicosa-2,8,10-trien-5-yl](hydroxy)methyl]hexa-2,4-dienamide, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Kellogg, E.H, Hejab, N.M.A, Nogales, E. 登録日 2016-08-11 公開日 2017-02-01 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Insights into the Distinct Mechanisms of Action of Taxane and Non-Taxane Microtubule Stabilizers from Cryo-EM Structures. J. Mol. Biol., 429, 2017
1ECP	PURINE NUCLEOSIDE PHOSPHORYLASE 分子名称: PURINE NUCLEOSIDE PHOSPHORYLASE 著者 Mao, C, Ealick, S.E. 登録日 1995-07-13 公開日 1996-06-20 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The crystal structure of Escherichia coli purine nucleoside phosphorylase: a comparison with the human enzyme reveals a conserved topology. Structure, 5, 1997
1F4D	CRYSTAL STRUCTURE OF E. COLI THYMIDYLATE SYNTHASE C146S, L143C COVALENTLY MODIFIED AT C143 WITH N-[TOSYL-D-PROLINYL]AMINO-ETHANETHIOL 分子名称: GLYCEROL, N-[TOSYL-D-PROLINYL]AMINO-ETHANETHIOL, SULFATE ION, ... 著者 Erlanson, D.A, Braisted, A.C, Raphael, D.R, Randal, M, Stroud, R.M, Gordon, E, Wells, J.A. 登録日 2000-06-07 公開日 2000-06-22 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Site-directed ligand discovery. Proc.Natl.Acad.Sci.USA, 97, 2000
8DIJ	NMR Structure of Streptococcal Protein GB1 Backbone Modified Variant: beta-ACPC24, beta-3-Lys28, beta-3-Lys31, beta-ACPC35 分子名称: Immunoglobulin G-binding protein G 著者 Rao, S.R, Reinert, Z.E. 登録日 2022-06-29 公開日 2022-11-23 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Chemical Shifts of Artificial Monomers Used to Construct Heterogeneous-Backbone Protein Mimetics in Random Coil and Folded States. Pept Sci (Hoboken), 115, 2023
1YJ7	Crystal structure of enteropathogenic E.coli (EPEC) type III secretion system protein EscJ 分子名称: GLYCEROL, PHOSPHATE ION, escJ 著者 Yip, C.K, Kimbrough, T.G, Felise, H.B, Vuckovic, M, Thomas, N.A, Pfuetzner, R.A, Frey, E.A, Finlay, B.B, Miller, S.I, Strynadka, N.C.J. 登録日 2005-01-13 公開日 2005-06-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural characterization of the molecular platform for type III secretion system assembly. Nature, 435, 2005
5UEH	Structure of GSTO1 covalently conjugated to quinolinic acid fluorosulfate 分子名称: 2-(4-chlorophenyl)-6-[(fluorosulfonyl)oxy]quinoline-4-carboxylic acid, GLYCEROL, Glutathione S-transferase omega-1, ... 著者 Mortenson, D.E, Wilson, I.A, Kelly, J.W. 登録日 2017-01-02 公開日 2018-01-17 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 "Inverse Drug Discovery" Strategy To Identify Proteins That Are Targeted by Latent Electrophiles As Exemplified by Aryl Fluorosulfates. J. Am. Chem. Soc., 140, 2018
1HQ5	CRYSTAL STRUCTURE OF THE BINUCLEAR MANGANESE METALLOENZYME ARGINASE COMPLEXED WITH S-(2-BORONOETHYL)-L-CYSTEINE, AN L-ARGININE ANALOGUE 分子名称: ARGINASE 1, MANGANESE (II) ION, S-2-(BORONOETHYL)-L-CYSTEINE 著者 Kim, N.N, Cox, J.D, Baggio, R.F, Emig, F.A, Mistry, S.K, Harper, S.L, Speicher, D.W, Morris Jr, S.M, Ash, D.E, Traish, A, Christianson, D.W. 登録日 2000-12-14 公開日 2001-04-04 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Probing erectile function: S-(2-boronoethyl)-L-cysteine binds to arginase as a transition state analogue and enhances smooth muscle relaxation in human penile corpus cavernosum. Biochemistry, 40, 2001
5SYC	Near-atomic resolution cryo-EM reconstruction of peloruside-stabilized microtubule 分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kellogg, E.H, Nogales, E. 登録日 2016-08-10 公開日 2017-02-01 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Insights into the Distinct Mechanisms of Action of Taxane and Non-Taxane Microtubule Stabilizers from Cryo-EM Structures. J. Mol. Biol., 429, 2017
1KK3	Structure of the wild-type large gamma subunit of initiation factor eIF2 from Pyrococcus abyssi complexed with GDP-Mg2+ 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ZINC ION, ... 著者 Schmitt, E, Blanquet, S, Mechulam, Y. 登録日 2001-12-06 公開日 2002-04-10 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The large subunit of initiation factor aIF2 is a close structural homologue of elongation factors. EMBO J., 21, 2002
3D03	1.9A structure of Glycerophoshphodiesterase (GpdQ) from Enterobacter aerogenes 分子名称: COBALT (II) ION, Phosphohydrolase 著者 Hadler, K.S, Tanifum, E, Yip, S.H.-C, Miti, N, Guddat, L.W, Jackson, C.J, Gahan, L.R, Carr, P.D, Nguyen, K, Ollis, D.L, Hengge, A.C, Larrabee, J.A, Schenk, G. 登録日 2008-04-30 公開日 2008-10-14 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Substrate-promoted formation of a catalytically competent binuclear center and regulation of reactivity in a glycerophosphodiesterase from Enterobacter aerogenes. J.Am.Chem.Soc., 130, 2008
3B9X	Crystal structure of the E. coli pyrimidine nucleoside hydrolase YeiK in complex with inosine 分子名称: CALCIUM ION, INOSINE, Pyrimidine-specific ribonucleoside hydrolase rihB, ... 著者 Iovane, E, Degano, M. 登録日 2007-11-07 公開日 2008-04-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for substrate specificity in group I nucleoside hydrolases Biochemistry, 47, 2008
4R1N	Crystal structure of (S)-3-hydroxybutylryl-CoA dehydrogenase form the n-butanol sysnthesizing bacterium, Clostridium butyricum. 分子名称: 3-hydroxybutyryl-CoA dehydrogenase 著者 Kim, E.J, Kim, S.W, Kim, K.J. 登録日 2014-08-07 公開日 2015-07-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of (S)-3-hydroxybutyryl-CoA dehydrogenase from Clostridium butyricum and its mutations that enhance reaction kinetics J MICROBIOL BIOTECHNOL., 24, 2014
3JZ7	Crystal structure of the extracellular domains of coxsackie & adenovirus receptor from mouse (mCAR) 分子名称: Coxsackievirus and adenovirus receptor homolog, ISOPROPYL ALCOHOL 著者 Max, K.E.A, Heinemann, U. 登録日 2009-09-23 公開日 2010-03-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 The coxsackievirus-adenovirus receptor reveals complex homophilic and heterophilic interactions on neural cells. J.Neurosci., 30, 2010
5Y4I	Crystal structure of glucose isomerase in complex with glycerol in one metal binding mode 分子名称: ACETATE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Bae, J.E, Kim, I.J, Nam, K.H. 登録日 2017-08-03 公開日 2017-09-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Crystal structure of glucose isomerase in complex with xylitol inhibitor in one metal binding mode Biochem. Biophys. Res. Commun., 493, 2017
4RD6	Structure of aIF2-gamma from Sulfolobus solfataricus bound to GDP 分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Translation initiation factor 2 subunit gamma 著者 Dubiez, E, Aleksandrov, A, Lazennec-Schurdevin, C, Mechulam, Y, Schmitt, E. 登録日 2014-09-18 公開日 2015-07-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.944 Å) 主引用文献 Identification of a second GTP-bound magnesium ion in archaeal initiation factor 2. Nucleic Acids Res., 43, 2015
1K4K	Crystal structure of E. coli Nicotinic acid mononucleotide adenylyltransferase 分子名称: Nicotinic acid mononucleotide adenylyltransferase, XENON 著者 Zhang, H, Zhou, T, Kurnasov, O, Cheek, S, Grishin, N.V, Osterman, A.L. 登録日 2001-10-08 公開日 2002-10-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structures of E. coli nicotinate mononucleotide adenylyltransferase and its complex with deamido-NAD. Structure, 10, 2002
4XOW	Structure of rsGreen0.7 in the green-on-state 分子名称: rsGreen0.7 著者 De Zitter, E, Van Meervelt, L. 登録日 2015-01-16 公開日 2015-09-09 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Expression-Enhanced Fluorescent Proteins Based on Enhanced Green Fluorescent Protein for Super-resolution Microscopy. Acs Nano, 9, 2015
1S3Q	Crystal structures of a novel open pore ferritin from the hyperthermophilic Archaeon Archaeoglobus fulgidus 分子名称: ZINC ION, ferritin 著者 Johnson, E, Cascio, D, Sawaya, M, Schroeder, I. 登録日 2004-01-13 公開日 2005-04-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of a tetrahedral open pore ferritin from the hyperthermophilic archaeon Archaeoglobus fulgidus. Structure, 13, 2005
1Z1C	Structural Determinants of Tissue Tropism and In Vivo Pathogenicity for the Parvovirus Minute virus of Mice 分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, 5'-D(*AP*CP*AP*CP*CP*AP*AP*AP*A)-3', 5'-D(*AP*TP*CP*CP*TP*CP*TP*AP*TP*CP*AP*C)-3', ... 著者 Kontou, M, Govindasamy, L, Nam, H.J, Bryant, N, Llamas-Saiz, A.L, Foces-Foces, C, Hernando, E, Rubio, M.P, McKenna, R, Almendral, J.M, Agbandje-McKenna, M. 登録日 2005-03-03 公開日 2005-09-06 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural determinants of tissue tropism and in vivo pathogenicity for the parvovirus minute virus of mice. J.Virol., 79, 2005
5A7U	Single-particle cryo-EM of co-translational folded adr1 domain inside the E. coli ribosome exit tunnel. 分子名称: REGULATORY PROTEIN ADR1, ZINC ION 著者 Nilsson, O.B, Hedman, R, Marino, J, Wickles, S, Bischoff, L, Johansson, M, Muller-Lucks, A, Trovato, F, Puglisi, J.D, O'Brien, E, Beckmann, R, von Heijne, G. 登録日 2015-07-10 公開日 2015-09-16 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Cotranslational Protein Folding Inside the Ribosome Exit Tunnel. Cell Rep., 12, 2015

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