PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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7BWY	Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus. 分子名称: GLYCEROL, Ice-binding protein isoform1a 著者 Yamauchi, A, Arai, T, Kondo, H, Tsuda, S. 登録日 2020-04-16 公開日 2020-05-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes. Biomolecules, 10, 2020
7BX9	Purification, characterization and X-ray structure of YhdA-type azoreductase from Bacillus velezensis 分子名称: Azoreductase, FLAVIN MONONUCLEOTIDE, GLYCEROL, ... 著者 Khan, F, Suguna, K. 登録日 2020-04-18 公開日 2020-12-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Purification, characterization, and crystal structure of YhdA-type azoreductase from Bacillus velezensis. Proteins, 89, 2021
8Q4D	IstA-IstB(E167Q) Strand Transfer Complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, DNA (118-MER) / TIR-transferred strand, ... 著者 de la Gandara, A, Spinola-Amilibia, M, Araujo-Bazan, L, Nunez-Ramirez, R, Berger, J.M, Arias-Palomo, E. 登録日 2023-08-06 公開日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.62 Å) 主引用文献 Molecular basis for transposase activation by a dedicated AAA+ ATPase. Nature, 630, 2024
2NAC	HIGH RESOLUTION STRUCTURES OF HOLO AND APO FORMATE DEHYDROGENASE 分子名称: NAD-DEPENDENT FORMATE DEHYDROGENASE, SULFATE ION 著者 Lamzin, V.S, Dauter, Z, Popov, V.O, Harutyunyan, E.H, Wilson, K.S. 登録日 1994-07-06 公開日 1995-01-26 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 High resolution structures of holo and apo formate dehydrogenase. J.Mol.Biol., 236, 1994
7FGW	Toxoplasma gondii dihydrofolate reductase thymidylate synthase (TgDHFR-TS) complexed with pyrimethamine, NADPH and dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 5-(4-CHLORO-PHENYL)-6-ETHYL-PYRIMIDINE-2,4-DIAMINE, BENZAMIDINE, ... 著者 Vanichtanankul, J, Yoomuang, A, Taweechai, S, Saeyang, T, Yuvaniyama, Y, Tarnchompoo, B, Yuthavong, Y, Kamchonwongpaisan, S. 登録日 2021-07-28 公開日 2022-06-29 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural Insight into Effective Inhibitors' Binding to Toxoplasma gondii Dihydrofolate Reductase Thymidylate Synthase. Acs Chem.Biol., 17, 2022
7EOZ	The structure of rice Defective Pollen Wall (DPW) in the complex with its cofactor NADP 分子名称: Fatty acyl-CoA reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Yan, L.M, Wang, W, Li, G, Wang, J. 登録日 2021-04-24 公開日 2022-08-24 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Defective Pollen Wall Bridges Lipid and Sugar Metabolisms in Plant Male Reproductive Development To Be Published
3K4F	X-Ray Crystal Structure of Human Heme Oxygenase-1 in Complex with 4-Phenyl-1-(1H-1,2,4-triazol-1-yl)-2-butanone 分子名称: 4-phenyl-1-(1H-1,2,4-triazol-1-yl)butan-2-one, HEXANE-1,6-DIOL, Heme oxygenase 1, ... 著者 Rahman, M.N, Jia, Z. 登録日 2009-10-05 公開日 2009-12-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Heme Oxygenase Inhibition by 2-Oxy-substituted 1-Azolyl-4-phenylbutanes: Effect of Variation of the Azole Moiety. X-Ray Crystal Structure of Human Heme Oxygenase-1 in Complex with 4-Phenyl-1-(1H-1,2,4-triazol-1-yl)-2-butanone. Chem.Biol.Drug Des., 75, 2010
2J5T	Glutamate 5-kinase from Escherichia coli complexed with glutamate 分子名称: CHLORIDE ION, GLUTAMATE 5-KINASE, GLUTAMIC ACID, ... 著者 Marco-Marin, C, Gil-Ortiz, F, Perez-Arellano, I, Cervera, J, Fita, I, Rubio, V. 登録日 2006-09-19 公開日 2007-03-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A Novel Two-Domain Architecture within the Amino Acid Kinase Enzyme Family Revealed by the Crystal Structure of Escherichia Coli Glutamate 5-Kinase. J.Mol.Biol., 367, 2007
7BWX	Crystal structure of ice-binding protein from an Antarctic ascomycete, Antarctomyces psychrotrophicus. 分子名称: GLYCEROL, Ice-binding protein isoform1a, SULFATE ION 著者 Yamauchi, A, Arai, T, Kondo, H, Tsuda, S. 登録日 2020-04-16 公開日 2020-05-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.904 Å) 主引用文献 An Ice-Binding Protein from an Antarctic Ascomycete Is Fine-Tuned to Bind to Specific Water Molecules Located in the Ice Prism Planes. Biomolecules, 10, 2020
2J6S	Ternary complex of Sulfolobus solfataricus Dpo4 DNA polymerase, O6- methylguanine modified DNA, and dATP. 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*C)-3', 5'-D(*TP*CP*AP*TP*XP*GP*AP*AP*TP*CP *CP*TP*TP*CP*CP*CP*CP*C)-3', ... 著者 Irimia, A, Eoff, R.L, Guengerich, F.P, Egli, M. 登録日 2006-10-04 公開日 2006-11-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Sulfolobus Solfataricus DNA Polymerase Dpo4 is Partially Inhibited by "Wobble" Pairing between O6- Methylguanine and Cytosine, But Accurate Bypass is Preferred. J.Biol.Chem., 282, 2007
5LIP	PSEUDOMONAS LIPASE COMPLEXED WITH RC-(RP, SP)-1,2-DIOCTYLCARBAMOYLGLYCERO-3-O-OCTYLPHOSPHONATE 分子名称: CALCIUM ION, OCTYL-PHOSPHINIC ACID 1,2-BIS-OCTYLCARBAMOYLOXY-ETHYL ESTER, TRIACYL-GLYCEROL HYDROLASE 著者 Lang, D.A, Dijkstra, B.W. 登録日 1997-09-02 公開日 1998-08-19 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural basis of the chiral selectivity of Pseudomonas cepacia lipase Eur.J.Biochem., 254, 1998
7JSF	Adeno-Associated Virus Helicase domain Heptamer with ssDNA 分子名称: DNA (5'-D(P*TP*TP*TP*T)-3'), Protein Rep68 著者 Escalante, C.R. 登録日 2020-08-14 公開日 2020-12-16 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (6.7 Å) 主引用文献 The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states. Nucleic Acids Res., 48, 2020
7BXZ	Crystal structure of the aminoglycoside 6'-N-acetyltransferase from Enterococcus faecium 分子名称: Aminoglycoside 6'-N-acetyltransferase 著者 Kwon, S, Park, H.H. 登録日 2020-04-21 公開日 2020-08-12 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.502 Å) 主引用文献 Structural analysis of a novel substrate-free form of the aminoglycoside 6'-N-acetyltransferase from Enterococcus faecium. Acta Crystallogr.,Sect.F, 76, 2020
7QQ7	Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with an inhibitor at partial occupancy with PEG 分子名称: ACETATE ION, BROMIDE ION, CHLORIDE ION, ... 著者 Snee, M, Levy, C, Kavanagh, M. 登録日 2022-01-06 公開日 2023-01-18 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with an inhibitor at partial occupancy with PEG To Be Published
7F80	Co-crystal structure of Inhibitor compound MA-211 in complex with human PPARdelta LBD 分子名称: (3R)-3-methyl-6-[2-[[5-methyl-2-[4-(trifluoromethyl)phenyl]imidazol-1-yl]methyl]phenoxy]hexanoic acid, Peroxisome proliferator-activated receptor delta 著者 Lakshminarasimhan, A, Rani, S.T, Senaiar, R.S, Krishnamurthy, N. 登録日 2021-06-30 公開日 2022-07-06 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Co-crystal structure of Inhibitor compound in complex with human PPARdelta LBD To Be Published
7FGP	Crystal structure of Aureimonas altamirenisis flavin-containing opine dehydrogenase (FAD-bound form) 分子名称: DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Yoshiwara, K, Watanabe, Y, Watanabe, S. 登録日 2021-07-27 公開日 2022-08-31 実験手法 X-RAY DIFFRACTION (1.47 Å) 主引用文献 Structural basis for Flavin-containing opine dehydrogenase from Aureimonas altamirensis To Be Published
7U32	MVV cleaved synaptic complex (CSC) intasome at 3.4 A resolution 分子名称: CALCIUM ION, DNA EV272, DNA EV273, ... 著者 Shan, Z, Pye, V.E, Cherepanov, P, Lyumkis, D. 登録日 2022-02-25 公開日 2022-05-11 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.46 Å) 主引用文献 Multivalent interactions essential for lentiviral integrase function. Nat Commun, 13, 2022
7C0M	Human cGAS-nucleosome complex 分子名称: Cyclic GMP-AMP synthase, DNA (145-MER), Histone H2A type 1-B/E, ... 著者 Kujirai, T, Zierhut, C, Takizawa, Y, Kim, R, Negishi, L, Uruma, N, Hirai, S, Funabiki, H, Kurumizaka, H. 登録日 2020-05-01 公開日 2020-09-16 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis for the inhibition of cGAS by nucleosomes. Science, 370, 2020
2NMR	An unusual twin-His arrangement in the pore of ammonia channels is essential for substrate conductance 分子名称: ACETATE ION, Ammonia channel, GLYCEROL, ... 著者 Lupo, D, Winkler, F.K. 登録日 2006-10-23 公開日 2006-11-14 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 An unusual twin-his arrangement in the pore of ammonia channels is essential for substrate conductance J.Biol.Chem., 281, 2006
7BP5	Structural insights into nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) 分子名称: ASN-ASP-PRO-ASP-TYR, GLYCEROL, Histone H2A.6, ... 著者 Luo, Q, Baihui, W. 登録日 2020-03-21 公開日 2020-11-11 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B. Proc.Natl.Acad.Sci.USA, 117, 2020
2NOX	Crystal structure of tryptophan 2,3-dioxygenase from Ralstonia metallidurans 分子名称: PROTOPORPHYRIN IX CONTAINING FE, Tryptophan 2,3-dioxygenase 著者 Zhang, Y, Kang, S.A, Mukherjee, T, Bale, S, Crane, B.R, Begley, T.P, Ealick, S.E. 登録日 2006-10-26 公開日 2006-12-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure and mechanism of tryptophan 2,3-dioxygenase, a heme enzyme involved in tryptophan catabolism and in quinolinate biosynthesis. Biochemistry, 46, 2007
3K7D	C-terminal (adenylylation) domain of E.coli Glutamine Synthetase Adenylyltransferase 分子名称: Glutamate-ammonia-ligase adenylyltransferase, SULFATE ION 著者 Xu, Y, Carr, P.D, Vasudevan, S.G, Ollis, D.L. 登録日 2009-10-12 公開日 2009-12-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of the Adenylylation Domain of E. coli Glutamine Synthetase Adenylyl Transferase: Evidence for Gene Duplication and Evolution of a New Active Site. J.Mol.Biol., 396, 2010
7QUI	Crystal structure of the N-terminal domain of Siglec-8 in complex with sulfonamide sialoside analogue 分子名称: (2~{S},4~{S},5~{R},6~{R})-5-acetamido-2-[(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-acetamido-2-(hydroxymethyl)-4,6-bis(oxidanyl)oxan-3-yl]oxy-3,5-bis(oxidanyl)-6-(sulfooxymethyl)oxan-4-yl]oxy-6-[(1~{R},2~{R})-3-(naphthalen-2-ylsulfonylamino)-1,2-bis(oxidanyl)propyl]-4-oxidanyl-oxane-2-carboxylic acid, Sialic acid-binding Ig-like lectin 8 著者 Lenza, M.P, Oyenarte, I, Atxabal, U, Nycholat, C, Franconetti, A, Quintana, J.I, Delgado, S, Unione, L, Paulson, J, Jimenez-Barbero, J, Ereno-Orbea, J. 登録日 2022-01-18 公開日 2023-01-18 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (3.352 Å) 主引用文献 Structures of the Inhibitory Receptor Siglec-8 in Complex with a High-Affinity Sialoside Analogue and a Therapeutic Antibody. Jacs Au, 3, 2023
7F9F	Thrombocorticin 分子名称: MAGNESIUM ION, Thrombocorticin 著者 Kageyama, H, Onodera, K, Sakai, R, Tanaka, Y, Freymann, D.M. 登録日 2021-07-04 公開日 2022-07-06 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.411 Å) 主引用文献 A marine sponge-derived lectin reveals hidden pathway for thrombopoietin receptor activation. Nat Commun, 13, 2022
7QU6	Crystal structure of the N-terminal domain of Siglec-8 分子名称: Sialic acid-binding Ig-like lectin 8 著者 Lenza, M.P, Atxabal, U, Nycholat, C.M, Oyenarte, I, Paulson, J.C, Franconetti, A, Quintana, J.I, Unione, L, Delgado, S, Jimenez-Barbero, J, Ereno-Orbea, J. 登録日 2022-01-17 公開日 2023-01-18 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Structures of the Inhibitory Receptor Siglec-8 in Complex with a High-Affinity Sialoside Analogue and a Therapeutic Antibody. Jacs Au, 3, 2023

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