PDB: 46006 件ウェブページステータス検索Chemie searchBIRD

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6Q3G	Structure of native bacteriophage P68 分子名称: Arstotzka protein, Head fiber protein, Inner core protein, ... 著者 Dominik, H, Karel, S, Fuzik, T, Plevka, P. 登録日 2018-12-04 公開日 2019-11-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure and genome ejection mechanism ofStaphylococcus aureusphage P68. Sci Adv, 5, 2019
4ZPC	Coxsackievirus B3 Polymerase - A341G mutant 分子名称: RNA-dependent RNA polymerase 著者 Peersen, O.B, McDonald, S.M. 登録日 2015-05-07 公開日 2016-05-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Design of a Genetically Stable High Fidelity Coxsackievirus B3 Polymerase That Attenuates Virus Growth in Vivo. J.Biol.Chem., 291, 2016
4Z1W	CRYSTAL STRUCTURE OF MONOMERIC BACTERIOPHYTOCHROME mutant D207L Y263F From Synchrotron 分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, 3-[2-[(Z)-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E,4R)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome 著者 Bhattacharya, S, Satyshur, K.A, Wangkanont, K, Lehtivuori, H, Forest, K.T. 登録日 2015-03-27 公開日 2016-01-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Removal of Chromophore-Proximal Polar Atoms Decreases Water Content and Increases Fluorescence in a Near Infrared Phytofluor. Front Mol Biosci, 2, 2015
3GTY	Promiscuous Substrate Recognition in Folding and Assembly Activities of the Trigger Factor Chaperone 分子名称: 30S ribosomal protein S7, Trigger factor 著者 Martinez-Hackert, E, Hendrickson, W.A. 登録日 2009-03-28 公開日 2009-12-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Promiscuous substrate recognition in folding and assembly activities of the trigger factor chaperone Cell(Cambridge,Mass.), 138, 2009
5JWL	Factor Inhibiting HIF D201E in Complex with Zn, and Alpha-Ketoglutarate 分子名称: 2-OXOGLUTARIC ACID, DI(HYDROXYETHYL)ETHER, Hypoxia-inducible factor 1-alpha inhibitor, ... 著者 Taabazuing, C.Y, Garman, S.C, Eron, S, Knapp, M.J. 登録日 2016-05-12 公開日 2017-05-17 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Factor Inhibiting HIF D201E in Complex with Zn, and Alpha-Ketoglutarate To Be Published
5JXS	Mutant GC216/7AA of 3D polymerase from Foot-and-Mouth Disease Virus 分子名称: MAGNESIUM ION, RNA Primer, RNA Template, ... 著者 Verdaguer, N, Ferrer-Orta, C. 登録日 2016-05-13 公開日 2016-06-01 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Both cis and trans Activities of Foot-and-Mouth Disease Virus 3D Polymerase Are Essential for Viral RNA Replication. J.Virol., 90, 2016
1MAH	FASCICULIN2-MOUSE ACETYLCHOLINESTERASE COMPLEX 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, FASCICULIN 2 著者 Bourne, Y, Taylor, P, Marchot, P. 登録日 1995-11-21 公開日 1996-04-03 最終更新日 2021-03-31 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Acetylcholinesterase inhibition by fasciculin: crystal structure of the complex. Cell(Cambridge,Mass.), 83, 1995
7SJJ	Crystal structure of photoactive yellow protein (PYP); F96oCNF construct 分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein 著者 Weaver, J.B, Kirsh, J.M, Boxer, S.G. 登録日 2021-10-17 公開日 2022-05-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments. J.Am.Chem.Soc., 144, 2022
4ZP7	Coxsackievirus B3 Polymerase - F364V mutant 分子名称: Genome polyprotein 著者 Peersen, O.B, McDonald, S.M. 登録日 2015-05-07 公開日 2016-05-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.901 Å) 主引用文献 Design of a Genetically Stable High Fidelity Coxsackievirus B3 Polymerase That Attenuates Virus Growth in Vivo. J.Biol.Chem., 291, 2016
3QO3	Crystal structure of Escherichia coli Hfq, in complex with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Protein hfq 著者 Beich-Frandsen, M, Vecerek, B, Hammele, H, Kloiber, K, Sjoeblom, B, Blasi, U, Djinovic-Carugo, K. 登録日 2011-02-09 公開日 2012-02-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural and biochemical studies on ATP binding and hydrolysis by the Escherichia coli RNA chaperone Hfq Plos One, 7, 2012
5YTX	Crystal structure of YB1 cold-shock domain in complex with UCAACU 分子名称: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*UP*CP*AP*AP*CP*U)-3') 著者 Yang, X, Huang, Y. 登録日 2017-11-20 公開日 2018-12-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.551 Å) 主引用文献 Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA. J.Biol.Chem., 294, 2019
3QT0	Revealing a steroid receptor ligand as a unique PPARgamma agonist 分子名称: 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE, Nuclear receptor coactivator 1 peptide, Peroxisome proliferator-activated receptor gamma 著者 Rong, H. 登録日 2011-02-22 公開日 2012-02-29 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.496 Å) 主引用文献 Revealing a steroid receptor ligand as a unique PPAR gamma agonist. Cell Res., 22, 2012
6Q7W	Crystal structure of PqsR (MvfR) ligand-binding domain in complex with compound 20 分子名称: GLYCEROL, Transcriptional regulator MvfR, ~{N}4-[3-(4-fluorophenyl)propyl]-6-(trifluoromethyl)pyridine-2,4-diamine 著者 Witzgall, F, Blankenfeldt, W. 登録日 2018-12-13 公開日 2019-11-20 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 Flexible Fragment Growing Boosts Potency of Quorum-Sensing Inhibitors against Pseudomonas aeruginosa Virulence. Chemmedchem, 15, 2020
6M79	Cryo-EM structure of Arabidopsis CRY under blue light-mediated activation 分子名称: ADENOSINE MONOPHOSPHATE, Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE 著者 Ma, L, Guan, Z.Y, Yin, P. 登録日 2020-03-18 公開日 2020-10-14 最終更新日 2021-08-04 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural insights into the photoactivation of Arabidopsis CRY2. Nat.Plants, 6, 2020
4ZKV	Crystal structure of human histidine triad nucleotide-binding protein 1 (hHINT1) refined to 1.92A at P21 space group 分子名称: Histidine triad nucleotide-binding protein 1, SULFATE ION 著者 Dolot, R.M, Seda, A, Nawrot, B. 登録日 2015-04-30 公開日 2016-03-02 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Crystallographic studies of the complex of human HINT1 protein with a non-hydrolyzable analog of Ap4A. Int.J.Biol.Macromol., 87, 2016
6Q7V	Crystal structure of PqsR (MvfR) ligand-binding domain in complex with compound 11 分子名称: Transcriptional regulator MvfR, ~{N}4-[(4-fluorophenyl)methyl]-6-(trifluoromethyl)pyridine-2,4-diamine 著者 Witzgall, F, Blankenfeldt, W. 登録日 2018-12-13 公開日 2019-11-20 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 Flexible Fragment Growing Boosts Potency of Quorum-Sensing Inhibitors against Pseudomonas aeruginosa Virulence. Chemmedchem, 15, 2020
4ZPB	Coxsackievirus B3 Polymerase - F364W mutant 分子名称: RNA-directed RNA polymerase 著者 Peersen, O.B, McDonald, S.M. 登録日 2015-05-07 公開日 2016-05-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.797 Å) 主引用文献 Design of a Genetically Stable High Fidelity Coxsackievirus B3 Polymerase That Attenuates Virus Growth in Vivo. J.Biol.Chem., 291, 2016
5KMB	Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) H112N mutant nucleoside L-Trp phosphoramidate substrate complex 分子名称: CHLORIDE ION, Histidine triad nucleotide-binding protein 1, [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-~{N}-[(2~ {S})-3-(1~{H}-indol-3-yl)-1-(methylamino)-1-oxidanylidene-propan-2-yl]phosphonamidic acid 著者 Maize, K.M, Finzel, B.C. 登録日 2016-06-26 公開日 2017-06-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A Crystal Structure Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides. Mol. Pharm., 14, 2017
5KM6	Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) H112N mutant Ara-A nucleoside phosphoramidate substrate complex 分子名称: Histidine triad nucleotide-binding protein 1, [(2~{R},3~{S},4~{S},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-~{N}-[2-(1~{H}-indol-3-yl)ethyl]phosphonamidic acid 著者 Maize, K.M, Finzel, B.C. 登録日 2016-06-26 公開日 2017-06-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A Crystal Structure Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides. Mol. Pharm., 14, 2017
4ZHE	Crystal structure of the SeMet substituted Topless related protein 2 (TPR2) N-terminal domain (1-209) from rice 分子名称: ASPR2 protein 著者 Ke, J, Ma, H, Gu, X, Brunzelle, J.S, Xu, H.E, Melcher, K. 登録日 2015-04-24 公開日 2015-08-05 最終更新日 2019-12-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for recognition of diverse transcriptional repressors by the TOPLESS family of corepressors. Sci Adv, 1, 2015
4ZLP	Crystal Structure of Notch3 Negative Regulatory Region 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ... 著者 Xu, X, Blacklow, S.C. 登録日 2015-05-01 公開日 2015-08-19 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.479 Å) 主引用文献 Insights into Autoregulation of Notch3 from Structural and Functional Studies of Its Negative Regulatory Region. Structure, 23, 2015
5KTW	CREBBP bromodomain in complex with Cpd 44 (3-((5-acetyl-1-(cyclopropylmethyl)-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-3-yl)amino)-N-isopropylbenzamide) 分子名称: 1,2-ETHANEDIOL, 3-[[1-(cyclopropylmethyl)-5-ethanoyl-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-3-yl]amino]-~{N}-propan-2-yl-benzamide, CREB-binding protein 著者 Murray, J.M, Boenig, G. 登録日 2016-07-12 公開日 2016-11-02 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.087 Å) 主引用文献 Discovery of a Potent and Selective in Vivo Probe (GNE-272) for the Bromodomains of CBP/EP300. J. Med. Chem., 59, 2016
4ZPD	Coxsackievirus B3 Polymerase - A345V mutant 分子名称: RNA-directed RNA polymerase 著者 Peersen, O.B, McDonald, S.M. 登録日 2015-05-07 公開日 2016-05-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.797 Å) 主引用文献 Design of a Genetically Stable High Fidelity Coxsackievirus B3 Polymerase That Attenuates Virus Growth in Vivo. J.Biol.Chem., 291, 2016
4ZPX	Crystal structure of Lon ATPase domain from Thermococcus onnurineus NA1 分子名称: ATP-dependent protease Lon, GLYCEROL 著者 An, Y.J, Kim, M.I, Na, J.H, Cha, S.S. 登録日 2015-05-08 公開日 2016-05-11 最終更新日 2020-02-19 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Structural disparity classifies AAA+ modules of Lon proteases into two distinct clades To Be Published
5YTT	Crystal structure of YB1 cold-shock domain in complex with UCAUGU 分子名称: Nuclease-sensitive element-binding protein 1, RNA (5'-R(P*UP*CP*AP*UP*GP*U)-3'), SULFATE ION 著者 Yang, X, Huang, Y. 登録日 2017-11-20 公開日 2018-12-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA. J.Biol.Chem., 294, 2019

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