PDB: 46006 件ウェブページステータス検索Chemie searchBIRD

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3GRC	Crystal structure of a sensor protein from Polaromonas sp. JS666 分子名称: Sensor protein, Kinase 著者 Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2009-03-25 公開日 2009-04-14 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Crystal structure of a sensor protein from Polaromonas sp. JS666 To be Published
3S9C	Russell's viper venom serine proteinase, RVV-V in complex with the fragment (residues 1533-1546) of human factor V 分子名称: ACETATE ION, Coagulation factor V, Vipera russelli proteinase RVV-V gamma, ... 著者 Nakayama, D, Ben Ammar, Y, Takeda, S. 登録日 2011-06-01 公開日 2011-09-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis of coagulation factor V recognition for cleavage by RVV-V Febs Lett., 585, 2011
7W3P	Crystal structure of RORgamma in complex with natural inverse agonist 分子名称: (3S,5R,8R,9R,10R,12R,13R,14R,17S)-4,4,8,10,14-pentamethyl-17-[(2R)-2,6,6-trimethyloxan-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthrene-3,12-diol, Nuclear receptor ROR-gamma, Peptide from Nuclear receptor coactivator 2 著者 Tian, S.Y, Li, Y. 登録日 2021-11-25 公開日 2022-12-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Crystal structure of RORgamma in complex with natural inverse agonist To Be Published
8FAI	Cryo-EM structure of the Agrobacterium T-pilus 分子名称: (7Z,19R,22S,25R)-22,25,26-trihydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphahexacos-7-en-19-yl (9Z)-octadec-9-enoate, Protein virB2 著者 Kreida, S, Narita, A, Johnson, M.D, Tocheva, E.I, Das, A, Jensen, G.J, Ghosal, D. 登録日 2022-11-27 公開日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Cryo-EM structure of the Agrobacterium tumefaciens T4SS-associated T-pilus reveals stoichiometric protein-phospholipid assembly. Structure, 31, 2023
6A60	Crystal structure of human FXR/RXR-LBD heterodimer bound to GW4064 and 9cRA and SRC1 分子名称: (9cis)-retinoic acid, 3-[(E)-2-(2-chloro-4-{[3-(2,6-dichlorophenyl)-5-(1-methylethyl)isoxazol-4-yl]methoxy}phenyl)ethenyl]benzoic acid, Bile acid receptor, ... 著者 Wang, N, Liu, J. 登録日 2018-06-25 公開日 2018-10-10 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Ligand binding and heterodimerization with retinoid X receptor alpha (RXR alpha ) induce farnesoid X receptor (FXR) conformational changes affecting coactivator binding J. Biol. Chem., 293, 2018
4OJR	Crystal Structure of the HIV-1 Integrase catalytic domain with GSK1264 分子名称: (2S)-tert-butoxy[4-(8-fluoro-5-methyl-3,4-dihydro-2H-chromen-6-yl)-2-methyl-1-oxo-1,2-dihydroisoquinolin-3-yl]ethanoic acid, CACODYLATE ION, HIV-1 Integrase, ... 著者 Gupta, K, Brady, T, Dyer, B, Hwang, Y, Male, F, Nolte, R.T, Wang, L, Velthuisen, E, Jeffrey, J, Van Duyne, G, Bushman, F.D. 登録日 2014-01-21 公開日 2014-06-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Allosteric Inhibition of Human Immunodeficiency Virus Integrase: LATE BLOCK DURING VIRAL REPLICATION AND ABNORMAL MULTIMERIZATION INVOLVING SPECIFIC PROTEIN DOMAINS. J.Biol.Chem., 289, 2014
3SXP	Crystal Structure of Helicobacter pylori ADP-L-glycero-D-manno-heptose-6-epimerase (rfaD, HP0859) 分子名称: ADP-L-glycero-D-mannoheptose-6-epimerase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Shaik, M.M, Zanotti, G, Cendron, L. 登録日 2011-07-15 公開日 2012-02-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 The crystal structure of ADP-L-glycero-D-manno-heptose-6-epimerase (HP0859) from Helicobacter pylori. Biochim.Biophys.Acta, 1814, 2011
3HD5	Crystal structure of a thiol:disulfide interchange protein dsbA from Bordetella parapertussis 分子名称: Thiol:disulfide interchange protein dsbA 著者 Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) 登録日 2009-05-06 公開日 2009-05-19 最終更新日 2021-02-10 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal structure of a thiol:disulfide interchange protein dsbA from Bordetella parapertussis To be Published
3HEK	HSP90 N-terminal domain in complex with 1-{4-[(2R)-1-(5-chloro-2,4-dihydroxybenzoyl)pyrrolidin-2-yl]benzyl}-3,3-difluoropyrrolidinium 分子名称: Heat shock protein HSP 90-alpha, PHOSPHATE ION, [(2~{R})-2-[4-[[3,3-bis(fluoranyl)pyrrolidin-1-yl]methyl]phenyl]pyrrolidin-1-yl]-[5-chloranyl-2,4-bis(oxidanyl)phenyl]methanone 著者 Gajiwala, K.S. 登録日 2009-05-08 公開日 2009-09-29 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Solution-phase parallel synthesis of Hsp90 inhibitors J.Comb.Chem., 11
8ANE	Structure of the type I-G CRISPR effector 分子名称: Cas7, RNA (66-MER) 著者 Shangguan, Q, Graham, S, Sundaramoorthy, R, White, M.F. 登録日 2022-08-05 公開日 2022-11-09 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structure and mechanism of the type I-G CRISPR effector. Nucleic Acids Res., 50, 2022
8ALY	Cryo-EM structure of human tankyrase 2 SAM-PARP filament (G1032W mutant) 分子名称: Poly [ADP-ribose] polymerase tankyrase-2, ZINC ION 著者 Mariotti, L, Inian, O, Desfosses, A, Beuron, F, Morris, E.P, Guettler, S. 登録日 2022-08-01 公開日 2022-11-16 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (2.98 Å) 主引用文献 Structural basis of tankyrase activation by polymerization. Nature, 612, 2022
8APZ	Crystal structure of wild-type L-N-Carbamoylase from Sinorhizobium meliloti 分子名称: ACETATE ION, D-ORNITHINE, FE (III) ION, ... 著者 Rozeboom, H.J, Mayer, C. 登録日 2022-08-11 公開日 2022-11-16 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Selecting Better Biocatalysts by Complementing Recoded Bacteria. Angew.Chem.Int.Ed.Engl., 62, 2023
8AQ0	Crystal structure of L-N-Carbamoylase from Sinorhizobium meliloti mutant L217G/F329C 分子名称: (2~{S})-2-(aminocarbonylamino)-3-(4-hydroxyphenyl)propanoic acid, CHLORIDE ION, FE (III) ION, ... 著者 Rozeboom, H.J, Mayer, C. 登録日 2022-08-11 公開日 2022-11-16 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Selecting Better Biocatalysts by Complementing Recoded Bacteria. Angew.Chem.Int.Ed.Engl., 62, 2023
4P01	Crystal Structure Analysis of Macrophage Migration Inhibitory Factor in complex with N-[(4-cyanophenyl)methyl]methanethioamide 分子名称: CHLORIDE ION, GLYCEROL, ISOPROPYL ALCOHOL, ... 著者 Pantouris, G, Lolis, E. 登録日 2014-02-19 公開日 2014-03-19 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 An Analysis of MIF Structural Features that Control Functional Activation of CD74. Chem.Biol., 22, 2015
2YF3	Crystal structure of DR2231, the MazG-like protein from Deinococcus radiodurans, complex with manganese 分子名称: GLYCEROL, MANGANESE (II) ION, MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE, ... 著者 Goncalves, A.M.D, deSanctis, D, McSweeney, S.M. 登録日 2011-04-01 公開日 2011-07-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans. J.Biol.Chem., 286, 2011
3T1Y	Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Murphy, F.V, Vendeix, F.A.P, Cantara, W, Leszczynska, G, Gustilo, E.M, Sproat, B, Malkiewicz, A.A.P, Agris, P.F. 登録日 2011-07-22 公開日 2012-01-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Human tRNA(Lys3)(UUU) Is Pre-Structured by Natural Modifications for Cognate and Wobble Codon Binding through Keto-Enol Tautomerism. J.Mol.Biol., 416, 2012
3T7R	Crystal structure of apo BVU_3255, a methyltransferase from Bacteroides vulgatus ATCC 8482 分子名称: 3-[(2Z)-3-methylpent-2-en-1-yl]benzene-1,2-diol, Putative methyltransferase 著者 Kumar, V, Sivaraman, J. 登録日 2011-07-31 公開日 2011-10-12 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural characterization of BVU_3255, a methyltransferase from human intestine antibiotic resistant pathogen Bacteroides vulgatus J.Struct.Biol., 2011
3TDA	Competitive replacement of thioridazine by prinomastat in crystals of cytochrome P450 2D6 分子名称: Cytochrome P450 2D6, PROTOPORPHYRIN IX CONTAINING FE, Prinomastat, ... 著者 Wang, A, Stout, C.D, Johnson, E.F. 登録日 2011-08-10 公開日 2012-08-15 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Contributions of Ionic Interactions and Protein Dynamics to Cytochrome P450 2D6 (CYP2D6) Substrate and Inhibitor Binding. J.Biol.Chem., 290, 2015
3GER	Guanine riboswitch bound to 6-chloroguanine 分子名称: 6-chloroguanine, ACETATE ION, COBALT HEXAMMINE(III), ... 著者 Gilbert, S.D, Batey, R.T. 登録日 2009-02-25 公開日 2009-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs Structure, 17, 2009
3SQ9	Crystal Structures of the Ligand Binding Domain of a Pentameric Alpha7 Nicotinic Receptor Chimera 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Neuronal acetylcholine receptor subunit alpha-7, ... 著者 Li, S.-X, Huang, S, Bren, N, Noridomi, K, Dellisanti, C, Sine, S, Chen, L. 登録日 2011-07-05 公開日 2011-09-28 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Ligand-binding domain of an alpha 7-nicotinic receptor chimera and its complex with agonist. Nat.Neurosci., 14, 2011
8GMO	Bacteriophage T4 capsid shell containing 9DE insertions into the gp23* major capsid protein subunits 分子名称: Mature capsid vertex protein, Mature major capsid protein 著者 Fokine, A, Rao, V.B. 登録日 2023-03-26 公開日 2023-05-10 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Design of bacteriophage T4-based artificial viral vectors for human genome remodeling. Nat Commun, 14, 2023
3GAO	Crystal structure of the guanine riboswitch bound to xanthine. 分子名称: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ... 著者 Gilbert, S.D, Batey, R.T. 登録日 2009-02-18 公開日 2009-06-23 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Adaptive ligand binding by the purine riboswitch in the recognition of Guanine and adenine analogs. Structure, 17, 2009
3UR5	Crystal Structure of PTE mutant K185R/I274N 分子名称: COBALT (II) ION, DIETHYL HYDROGEN PHOSPHATE, Parathion hydrolase 著者 Tsai, P, Fox, N.G, Li, Y, Barondeau, D.P, Raushel, F.M. 登録日 2011-11-21 公開日 2012-08-01 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry, 51, 2012
3URQ	Crystal Structure of PTE mutant H254G/H257W/L303T/M317L/I106C/F132I/L271I/K185R/I274N/A80V/R67H with cyclohexyl methylphosphonate inhibitor 分子名称: COBALT (II) ION, IMIDAZOLE, Parathion hydrolase, ... 著者 Tsai, P, Fox, N.G, Li, Y, Barondeau, D.P, Raushel, F.M. 登録日 2011-11-22 公開日 2012-08-01 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry, 51, 2012
3UR2	Crystal Structure of PTE mutant H254G/H257W/L303T/K185R/I274N/A80V 分子名称: 1,2-ETHANEDIOL, COBALT (II) ION, IMIDAZOLE, ... 著者 Tsai, P, Fox, N.G, Li, Y, Barondeau, D.P, Raushel, F.M. 登録日 2011-11-21 公開日 2012-08-01 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Enzymes for the homeland defense: optimizing phosphotriesterase for the hydrolysis of organophosphate nerve agents. Biochemistry, 51, 2012

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