PDB: 5591 件ウェブページステータス検索Chemie searchBIRD

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5WOW	Solution NMR structure of cyclotide MCoTI-I 分子名称: Two inhibitor peptide topologies 2 著者 Schroeder, C.I, Kwon, S. 登録日 2017-08-03 公開日 2018-08-08 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Targeted Delivery of Cyclotides via Conjugation to a Nanobody. ACS Chem. Biol., 13, 2018
5XG5	Crystal structure of Mitsuba-1 with bound NAcGal 分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, MITSUBA-1 著者 Terada, D, Voet, A.R.D, Kamata, K, Zhang, K.Y.J, Tame, J.R.H. 登録日 2017-04-12 公開日 2017-07-12 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Computational design of a symmetrical beta-trefoil lectin with cancer cell binding activity. Sci Rep, 7, 2017
6EGP	Crystal Structure of a Trigonal Pyramidal Pb(II)S3 Complex in a Three-stranded Coiled coil Peptide 分子名称: LEAD (II) ION, Pb(II)(GRAND CoilSerL12AL16C)3-, ZINC ION 著者 Ruckthong, L, Stuckey, J.A, Pecoraro, V.L. 登録日 2018-08-20 公開日 2020-02-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Crystal Structure of a Trigonal Pyramidal Pb(II)S3 Complex in a Three-stranded Coiled coil Peptide To Be Published
7NBI	Crystal structure of a monomeric FLT3 Ligand variant 分子名称: Fms-related tyrosine kinase 3 ligand, SULFATE ION 著者 Pannecoucke, E, Raes, L, Savvides, S.N. 登録日 2021-01-26 公開日 2021-04-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Engineering and crystal structure of a monomeric FLT3 ligand variant. Acta Crystallogr.,Sect.F, 77, 2021
4MTP	RdRp from Japanesese Encephalitis Virus 分子名称: RNA dependent RNA polymerase, ZINC ION 著者 Surana, P, Nair, D.T. 登録日 2013-09-20 公開日 2013-12-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 RNA-dependent RNA polymerase of Japanese encephalitis virus binds the initiator nucleotide GTP to form a mechanistically important pre-initiation state. Nucleic Acids Res., 42, 2014
2P6J	Full-sequence computational design and solution structure of a thermostable protein variant 分子名称: designed engrailed homeodomain variant UVF 著者 Shah, P.S, Hom, G.K, Ross, S.A, Lassila, J.K, Crowhurst, K.A, Mayo, S.L. 登録日 2007-03-18 公開日 2007-08-14 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Full-sequence Computational Design and Solution Structure of a Thermostable Protein Variant. J.Mol.Biol., 372, 2007
2P05	Structural Insights into the Evolution of a Non-Biological Protein 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, PENTAETHYLENE GLYCOL, ... 著者 Smith, M, Rosenow, M, Wang, M, Allen, J.P, Szostak, J.W, Chaput, J.C. 登録日 2007-02-28 公開日 2007-06-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural insights into the evolution of a non-biological protein: importance of surface residues in protein fold optimization. PLoS ONE, 2, 2007
4W5P	Prp peptide 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PrP peptide 著者 Yu, L, Lee, S.-J, Yee, V. 登録日 2014-08-18 公開日 2015-05-27 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.151 Å) 主引用文献 Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations. Biochemistry, 54, 2015
4W67	Crystal structure of Prp peptide 分子名称: PrP peptide 著者 Yu, L, Lee, S.-J, Yee, V. 登録日 2014-08-20 公開日 2015-05-27 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.001 Å) 主引用文献 Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations. Biochemistry, 54, 2015
4V3Q	Designed armadillo repeat protein with 4 internal repeats, 2nd generation C-cap and 3rd generation N-cap. 分子名称: CALCIUM ION, GLYCEROL, YIII_M4_AII 著者 Reichen, C, Madhurantakam, C, Pluckthun, A, Mittl, P. 登録日 2014-10-20 公開日 2016-01-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structures of designed armadillo-repeat proteins show propagation of inter-repeat interface effects. Acta Crystallogr D Struct Biol, 72, 2016
4W71	Crystal structure of a prion peptide 分子名称: PrP peptide 著者 Yu, L, Lee, S.-J, Yee, V. 登録日 2014-08-21 公開日 2015-05-27 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations. Biochemistry, 54, 2015
4V8V	Structure and conformational variability of the Mycobacterium tuberculosis fatty acid synthase multienzyme complex 分子名称: FLAVIN MONONUCLEOTIDE, TYPE-I FATTY ACID SYNTHASE 著者 Ciccarelli, L, Connell, S.R, Enderle, M, Mills, D.J, Vonck, J, Grininger, M. 登録日 2013-04-18 公開日 2014-07-09 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (20 Å) 主引用文献 Structure and Conformational Variability of the Mycobacterium Tuberculosis Fatty Acid Synthase Multienzyme Complex. Structure, 21, 2013
4V8W	Structure and conformational variability of the Mycobacterium tuberculosis fatty acid synthase multienzyme complex 分子名称: FLAVIN MONONUCLEOTIDE, TYPE-I FATTY ACID SYNTHASE 著者 Ciccarelli, L, Connell, S.R, Enderle, M, Mills, D.J, Vonck, J, Grininger, M. 登録日 2013-04-18 公開日 2014-07-09 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (17.5 Å) 主引用文献 Structure and Conformational Variability of the Mycobacterium Tuberculosis Fatty Acid Synthase Multienzyme Complex. Structure, 21, 2013
8Q52	A PBP-like protein built from fragments of different folds 分子名称: Leucine-specific-binding protein,Chemotaxis protein CheY, SULFATE ION 著者 Shanmugaratnam, S, Toledo-Patino, S, Goetz, S.K, Farias-Rico, J.A, Hocker, B. 登録日 2023-08-08 公開日 2024-04-10 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Molecular handcraft of a well-folded protein chimera. Febs Lett., 598, 2024
7RX5	Cryo-EM reconstruction of Form1-N2 nanotube (Form I like) 分子名称: F1-N2 nanotube 著者 Wang, F, Gnewou, O.M, Solemanifar, A, Xu, C, Egelman, E.H, Conticello, V.P. 登録日 2021-08-21 公開日 2021-09-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM of Helical Polymers. Chem.Rev., 122, 2022
6OV9	Coiled-coil Trimer with Glu:p-nitrophenylalanine:Lys Triad 分子名称: Coiled-coil Trimer with Glu:p-nitrophenylalanine:Lys Triad 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-05-07 公開日 2020-04-29 最終更新日 2020-05-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6OVS	Coiled-coil Trimer with Glu:Tyr:Lys Triad 分子名称: Coiled-coil Trimer with Glu:Tyr:Lys Triad, PENTAETHYLENE GLYCOL 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-05-08 公開日 2020-04-29 最終更新日 2020-05-20 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6OSD	Coiled-coil Trimer with Glu:Phe:Lys Triad 分子名称: Coiled-coil Trimer with Glu:Phe:Lys Triad 著者 Smith, M.S, Stern, K.L, Billings, W.M, Price, J.L. 登録日 2019-05-01 公開日 2020-04-29 最終更新日 2020-05-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Context-Dependent Stabilizing Interactions among Solvent-Exposed Residues along the Surface of a Trimeric Helix Bundle. Biochemistry, 59, 2020
6OLO	Controlling the Self-Assembly of Synthetic Metal-Coordinating Coiled-Coil Peptides: Hexagonal Lattice from a Trimeric Coiled Coil 分子名称: COPPER (II) ION, Designed trimeric coiled coil peptide 著者 Schieb, K.A, Horne, W.S. 登録日 2019-04-16 公開日 2020-03-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Understanding and controlling the metal-directed assembly of terpyridine-functionalized coiled-coil peptides. Chem.Commun.(Camb.), 55, 2019
2DX4	NMR structure of DP5_conformation2: monomeric beta-hairpin 分子名称: DP5_conformation2 著者 Tamura, A, Araki, M. 登録日 2006-08-23 公開日 2007-01-02 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Transformation of an alpha-helix peptide into a beta-hairpin induced by addition of a fragment results in creation of a coexisting state. Proteins, 66, 2006
7CCN	The binding structure of a lanthanide binding tag (LBT3) with lutetium ion (Lu3+) 分子名称: LBT3, LUTETIUM (III) ION 著者 Hatanaka, T, Kikkawa, N, Matsugami, A, Hosokawa, Y, Hayashi, F, Ishida, N. 登録日 2020-06-17 公開日 2021-04-28 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The origins of binding specificity of a lanthanide ion binding peptide. Sci Rep, 10, 2020
5I1N	Villin headpiece subdomain with a Gln26 to beta-3-homoglutamine substitution 分子名称: D-Villin headpiece subdomain, Villin-1 著者 Kreitler, D.F, Mortenson, D.E, Gellman, S.H, Forest, K.T. 登録日 2016-02-05 公開日 2016-05-25 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Effects of Single alpha-to-beta Residue Replacements on Structure and Stability in a Small Protein: Insights from Quasiracemic Crystallization. J.Am.Chem.Soc., 138, 2016
5I1Z	Structure of nvPizza2-H16S58 分子名称: SULFATE ION, nvPizza2-H16S58 著者 Tame, J.R.H, Voet, A.R.D. 登録日 2016-02-07 公開日 2017-02-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Broken Symmetry: Partial domain swapping in an artificial trimeric protein To Be Published
5IF6	Structure of a computationally designed 17-OHP binder 分子名称: (9beta)-17-hydroxypregn-4-ene-3,20-dione, OHP9_1c, SODIUM ION 著者 Stoddard, B.L, Doyle, L.A. 登録日 2016-02-25 公開日 2017-03-01 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.501 Å) 主引用文献 Sampling and energy evaluation challenges in ligand binding protein design. Protein Sci., 26, 2017
6B17	Design of a short thermally stable alpha-helix embedded in a macrocycle 分子名称: 3,3'-dimethyl-1,1'-biphenyl, Capped-strapped peptide 著者 Wu, H, Acharyya, A, Wu, Y, Liu, L, Jo, H, Gai, F, DeGrado, W.F. 登録日 2017-09-17 公開日 2018-02-21 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Design of a Short Thermally Stable alpha-Helix Embedded in a Macrocycle. Chembiochem, 19, 2018

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