Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5L3N
DownloadVisualize
BU of 5l3n by Molmil
D11 bound [N29, S39_PQ]-IGF-II
分子名称: Insulin-like growth factor II
著者Hexnerova, R.
登録日2016-05-23
公開日2016-08-10
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Probing Receptor Specificity by Sampling the Conformational Space of the Insulin-like Growth Factor II C-domain.
J.Biol.Chem., 291, 2016
8ENJ
DownloadVisualize
BU of 8enj by Molmil
Design, synthesis, biological evaluation, and X-ray crystallography of diarylpyrazole derivatives possessing terminal arylsulfonamide moieties as anti-proliferative agents targeting c-Jun N-terminal kinase (JNK)
分子名称: Mitogen-activated protein kinase 10, N-[3-({(4P)-4-[(3M)-1-tert-butyl-3-(3-hydroxyphenyl)-1H-pyrazol-4-yl]pyridin-2-yl}amino)propyl]-4-hydroxybenzene-1-sulfonamide
著者Park, H, Mersal, K.I.
登録日2022-09-30
公開日2023-10-18
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Evaluation of novel pyrazol-4-yl pyridine derivatives possessing arylsulfonamide tethers as c-Jun N-terminal kinase (JNK) inhibitors in leukemia cells.
Eur.J.Med.Chem., 261, 2023
6V1W
DownloadVisualize
BU of 6v1w by Molmil
NMR Structure of C-terminal Domain of phi29 ATPase
分子名称: DNA packaging protein
著者Mahler, B, Mao, H, Morais, M.C.
登録日2019-11-21
公開日2020-09-30
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR structure of a vestigial nuclease provides insight into the evolution of functional transitions in viral dsDNA packaging motors.
Nucleic Acids Res., 48, 2020
8D9M
DownloadVisualize
BU of 8d9m by Molmil
Cryo-EM of the OmcZ nanowires from Geobacter sulfurreducens
分子名称: Cytochrome c, HEME C
著者Wang, F, Chan, C.H, Mustafa, K, Hochbaum, A.I, Bond, D.R, Egelman, E.H.
登録日2022-06-10
公開日2022-09-14
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of Geobacter OmcZ filaments suggests extracellular cytochrome polymers evolved independently multiple times.
Elife, 11, 2022
8VXF
DownloadVisualize
BU of 8vxf by Molmil
Structure of Casein kinase I isoform delta (CK1d) complexed with inhibitor 15
分子名称: (2P,3P,8S)-2-(5-fluoropyridin-2-yl)-6,6-dimethyl-3-(1H-pyrazolo[3,4-b]pyridin-4-yl)-6,7-dihydro-4H-pyrazolo[5,1-c][1,4]oxazine, Casein kinase I isoform delta
著者Thompson, A.A, Milligan, C.M, Sharma, S.
登録日2024-02-04
公開日2024-05-08
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure-Based Optimization of Selective and Brain Penetrant CK1 delta Inhibitors for the Treatment of Circadian Disruptions.
Acs Med.Chem.Lett., 15, 2024
8DHU
DownloadVisualize
BU of 8dhu by Molmil
Crystal structure of LARP-DM15 from Drosophila melanogaster bound to m7GpppC
分子名称: La-related protein 1, MAGNESIUM ION, [[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-9-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate
著者Nguyen, E, Berman, A.J.
登録日2022-06-28
公開日2024-01-17
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献Comparative analysis of the LARP1 C-terminal DM15 region through Coelomate evolution.
Plos One, 19, 2024
8DIO
DownloadVisualize
BU of 8dio by Molmil
Crystal structure of LARP1-DM15 from Danio rerio bound to m7GpppC
分子名称: 2-amino-7-methyl-1,7-dihydro-6H-purin-6-one, La ribonucleoprotein 1, translational regulator, ...
著者Nguyen, E, Berman, A.J.
登録日2022-06-29
公開日2024-01-17
最終更新日2024-09-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Comparative analysis of the LARP1 C-terminal DM15 region through Coelomate evolution.
Plos One, 19, 2024
6VLA
DownloadVisualize
BU of 6vla by Molmil
Hs05 - Intragenic antimicrobial peptide
分子名称: Intragenic antimicrobial peptide
著者Santos, M.A, Silva, E.M.C, Brand, G.D, Oliveira, A.L.
登録日2020-01-23
公開日2020-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Characterization of novel human Intragenic Antimicrobial Peptides, incorporation and release studies from ureasil-polyether hybrid matrix
Materials Science and Engineering C, Materials for Biological Applications, 119, 2020
7AG5
DownloadVisualize
BU of 7ag5 by Molmil
Structure of the Laspartomycin C double mutant G4D D-allo-Thr9D-Dap in complex with Geranyl phosphate
分子名称: (~{E})-13-methyltetradec-2-enoic acid, CALCIUM ION, Geranyl phosphate, ...
著者Zeronian, M.R, Pearce, N.M, Wood, T.M, Martin, N.I, Janssen, B.J.C.
登録日2020-09-21
公開日2022-02-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Mechanistic insights into the C55-P targeting lipopeptide antibiotics revealed by structure-activity studies and high-resolution crystal structures
Chem Sci, 13, 2022
6LR9
DownloadVisualize
BU of 6lr9 by Molmil
HSP90 in complex with Debio0932
分子名称: 2-[[6-(dimethylamino)-1,3-benzodioxol-5-yl]sulfanyl]-1-[2-(2,2-dimethylpropylamino)ethyl]imidazo[4,5-c]pyridin-4-amine, GLYCEROL, Heat shock protein HSP 90-alpha
著者Cao, H.L.
登録日2020-01-15
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.196 Å)
主引用文献Complex crystal structure determination and anti-non-small-cell lung cancer activity of the Hsp90 N inhibitor Debio0932.
Acta Crystallogr D Struct Biol, 77, 2021
7NG8
DownloadVisualize
BU of 7ng8 by Molmil
Trimeric efflux pump Klebsiella TolC in complex with KlebC
分子名称: Klebicin C activity, Outer membrane channel protein
著者Webby, M.N, Housden, N.G, Kleanthous, C.
登録日2021-02-08
公開日2021-06-30
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Toxin import through the antibiotic efflux channel TolC.
Nat Commun, 12, 2021
6X40
DownloadVisualize
BU of 6x40 by Molmil
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus picrotoxin
分子名称: (1aR,2aR,3S,6R,6aS,8aS,8bR,9R)-2a-hydroxy-8b-methyl-9-(prop-1-en-2-yl)hexahydro-3,6-methano-1,5,7-trioxacyclopenta[ij]c yclopropa[a]azulene-4,8(3H)-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kim, J.J, Gharpure, A, Teng, J, Zhuang, Y, Howard, R.J, Zhu, S, Noviello, C.M, Walsh, R.M, Lindahl, E, Hibbs, R.E.
登録日2020-05-21
公開日2020-09-09
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Shared structural mechanisms of general anaesthetics and benzodiazepines.
Nature, 585, 2020
8PM0
DownloadVisualize
BU of 8pm0 by Molmil
Influenza A/H7N9 polymerase in replicase-like conformation in pre-initiation state with Pol II pS5 CTD peptide mimic bound in site 1A/2A
分子名称: 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, Polymerase acidic protein, ...
著者Arragain, B, Cusack, S.
登録日2023-06-27
公開日2024-02-21
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome.
Nat Commun, 15, 2024
4X18
DownloadVisualize
BU of 4x18 by Molmil
[Ru(TAP)2(dppz-11-Me)]2+ bound to d(TCGGCGCCGA)
分子名称: (11-methyldipyrido[3,2-a:2',3'-c]phenazine-kappa~2~N~4~,N~5~)[bis(pyrazino[2,3-f]quinoxaline-kappa~2~N~1~,N~10~)]ruthenium, BARIUM ION, CHLORIDE ION, ...
著者Hall, J.P, Cardin, C.J.
登録日2014-11-24
公開日2015-05-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献The Structural Effect of Methyl Substitution on the Binding of Polypyridyl Ru-dppz Complexes to DNA
Organometallics, 2015
4X1A
DownloadVisualize
BU of 4x1a by Molmil
Lambda-[Ru(TAP)2(dppz-10,12-Me)]2+ bound to d(TCGGCGCCGA)
分子名称: (10,12-dimethyldipyrido[3,2-a:2',3'-c]phenazine-kappa~2~N~4~,N~5~)[bis(pyrazino[2,3-f]quinoxaline-kappa~2~N~1~,N~10~)]ruthenium, BARIUM ION, DNA (5'-D(*TP*CP*GP*GP*CP*GP*CP*CP*GP*A)-3')
著者Hall, J.P, Cardin, C.J.
登録日2014-11-24
公開日2015-05-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献The Structural Effect of Methyl Substitution on the Binding of Polypyridyl Ru-dppz Complexes to DNA
Organometallics, 2015
8B3X
DownloadVisualize
BU of 8b3x by Molmil
High resolution crystal structure of dimeric SUDV VP40
分子名称: Matrix protein VP40
著者Werner, A.-D, Norris, M, Saphire, E.O, Becker, S.
登録日2022-09-17
公開日2023-06-21
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.531 Å)
主引用文献The C-terminus of Sudan ebolavirus VP40 contains a functionally important CX n C motif, a target for redox modifications.
Structure, 31, 2023
8V80
DownloadVisualize
BU of 8v80 by Molmil
Alpha7-nicotinic acetylcholine receptor bound to epibatidine and (-)-TQS
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3aR,4S,9bS)-4-(naphthalen-1-yl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-04
公開日2024-02-21
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (2.34 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8V88
DownloadVisualize
BU of 8v88 by Molmil
Alpha7-nicotinic acetylcholine receptor bound to epibatidine and GAT107
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3aR,4S,9bS)-4-(4-bromophenyl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-05
公開日2024-02-21
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8V86
DownloadVisualize
BU of 8v86 by Molmil
Alpha7-nicotinic acetylcholine receptor bound to GAT107
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3aR,4S,9bS)-4-(4-bromophenyl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-04
公開日2024-02-21
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
7NH8
DownloadVisualize
BU of 7nh8 by Molmil
Crystal structure of human carbonic anhydrase II with N-((1-(6-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)hexyl)-1H-1,2,3-triazol-4-yl)methyl)-4-sulfamoylbenzamide
分子名称: Carbonic anhydrase 2, N-((1-(6-((3aR,7R,7aS)-7-hydroxy-2,2-dimethyltetrahydro-[1,3]dioxolo[4,5-c]pyridin-5(4H)-yl)hexyl)-1H-1,2,3-triazol-4-yl)methyl)-4-sulfamoylbenzamide, ZINC ION
著者Angeli, A, Ferraroni, M.
登録日2021-02-10
公開日2022-02-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.369 Å)
主引用文献Synthesis of Azasugar-Sulfonamide conjugates and their Evaluation as Inhibitors of Carbonic Anhydrases: the Azasugar Approach to Selectivity
Eur.J.Org.Chem., 2021
8SSO
DownloadVisualize
BU of 8sso by Molmil
AurA bound to danusertib and inhibiting monobody Mb2
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Aurora kinase A, ...
著者Ludewig, H, Kim, C, Kern, D.
登録日2023-05-08
公開日2023-09-06
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献A biophysical framework for double-drugging kinases.
Proc.Natl.Acad.Sci.USA, 120, 2023
8SSP
DownloadVisualize
BU of 8ssp by Molmil
AurA bound to danusertib and activating monobody Mb1
分子名称: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
著者Ludewig, H, Kim, C, Kern, D.
登録日2023-05-08
公開日2023-09-06
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A biophysical framework for double-drugging kinases.
Proc.Natl.Acad.Sci.USA, 120, 2023
6PBD
DownloadVisualize
BU of 6pbd by Molmil
DNA N6-Adenine Methyltransferase CcrM In Complex with Double-Stranded DNA Oligonucleotide Containing Its Recognition Sequence GAATC
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*TP*CP*AP*AP*TP*GP*AP*AP*TP*CP*CP*CP*AP*AP*G)-3'), DNA (5'-D(*GP*CP*TP*TP*GP*GP*GP*AP*TP*TP*CP*AP*TP*TP*GP*AP*AP*TP*C)-3'), ...
著者Horton, J.R, Cheng, X, Woodcock, C.B.
登録日2019-06-13
公開日2019-10-23
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.343 Å)
主引用文献The cell cycle-regulated DNA adenine methyltransferase CcrM opens a bubble at its DNA recognition site.
Nat Commun, 10, 2019
7OSL
DownloadVisualize
BU of 7osl by Molmil
Cryo-EM structure of nonameric EPEC SctV-C
分子名称: Translocator EscV
著者Fahrenkamp, D, Wald, J, Yuan, B, Marlovits, T.C.
登録日2021-06-09
公開日2021-09-29
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural Dynamics of the Functional Nonameric Type III Translocase Export Gate.
J.Mol.Biol., 433, 2021
8R3K
DownloadVisualize
BU of 8r3k by Molmil
Influenza A/H7N9 polymerase in self-stalled pre-termination state, with Pol II pS5 CTD peptide mimic bound in site 1A/2A.
分子名称: 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, PYROPHOSPHATE 2-, ...
著者Arragain, B, Cusack, S.
登録日2023-11-09
公開日2024-02-21
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome.
Nat Commun, 15, 2024

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon