PDB: 1848 件ウェブページステータス検索Chemie searchBIRD

---

3K7A	Crystal Structure of an RNA polymerase II-TFIIB complex 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Liu, X, Bushnell, D.A, Wang, D, Calero, G, Kornberg, R.D. 登録日 2009-10-12 公開日 2009-11-24 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism. Science, 327, 2010
3PO2	Arrested RNA Polymerase II elongation complex 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Cheung, A.C.M, Cramer, P. 登録日 2010-11-21 公開日 2011-03-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural basis of RNA polymerase II backtracking, arrest and reactivation. Nature, 471, 2011
1Y1W	Complete RNA Polymerase II elongation complex 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*T)-3', 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*GP*CP*CP*TP*GP*GP*TP*CP*AP*T)-3', 5'-R(*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3', ... 著者 Cramer, P, Kettenberger, H, Armache, K.-J. 登録日 2004-11-19 公開日 2005-01-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS Mol.Cell, 16, 2004
1Y1V	Refined RNA Polymerase II-TFIIS complex 分子名称: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, DNA-directed RNA polymerase II 19 kDa polypeptide, ... 著者 Kettenberger, H, Armache, K.-J, Cramer, P. 登録日 2004-11-19 公開日 2004-12-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS. Mol.Cell, 16, 2004
1Y77	Complete RNA Polymerase II elongation complex with substrate analogue GMPCPP 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*T)-3', 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*T*CP*GP*CP*CP*TP*GP*GP*TP*CP*TP*G)-3', 5'-R(*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3', ... 著者 Kettenberger, H, Armache, K.-J, Cramer, P. 登録日 2004-12-08 公開日 2005-01-04 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS Mol.Cell, 16, 2004
2JA5	CPD lesion containing RNA Polymerase II elongation complex A 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TTP*TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', DNA-directed RNA polymerase II subunit RPB1, ... 著者 Brueckner, F, Hennecke, U, Carell, T, Cramer, P. 登録日 2006-11-23 公開日 2007-02-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Cpd Damage Recognition by Transcribing RNA Polymerase II Science, 315, 2007
2JA8	CPD lesion containing RNA Polymerase II elongation complex D 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TP*TP*TP*TTP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP *AP*GP*CP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*AP*UP)-3', ... 著者 Brueckner, F, Hennecke, U, Carell, T, Cramer, P. 登録日 2006-11-23 公開日 2007-02-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Cpd Damage Recognition by Transcribing RNA Polymerase II. Science, 315, 2007
2JA7	CPD lesion containing RNA Polymerase II elongation complex C 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TP*TP*TTP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP *AP*GP*CP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Brueckner, F, Hennecke, U, Carell, T, Cramer, P. 登録日 2006-11-23 公開日 2007-02-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Cpd Damage Recognition by Transcribing RNA Polymerase II. Science, 315, 2007
2JA6	CPD lesion containing RNA Polymerase II elongation complex B 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *CP*TP*TP*TTP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP *AP*GP*CP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Brueckner, F, Hennecke, U, Carell, T, Cramer, P. 登録日 2006-11-23 公開日 2007-02-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (4 Å) 主引用文献 CPD damage recognition by transcribing RNA polymerase II. Science, 315, 2007
4BBR	Structure of RNA polymerase II-TFIIB complex 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Sainsbury, S, Niesser, J, Cramer, P. 登録日 2012-09-27 公開日 2012-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structure and Function of the Initially Transcribing RNA Polymerase II-TFIIB Complex Nature, 493, 2013
4BBS	Structure of an initially transcribing RNA polymerase II-TFIIB complex 分子名称: 5'-D(*AP*GP*CP*GP*CP*AP*GP*TP*TP*GP*TP*GP*CP*TP *AP*TP*GP*AP*TP*AP*TP*TP*TP*TP*TP*AP*TP)-3', 5'-D(*GP*GP*CP*AP*CP*AP*AP*CP*TP*GP*CP*GP*CP*TP)-3', 5'-R(*AP*UP*AP*UP*CP*AP)-3', ... 著者 Sainsbury, S, Niesser, J, Cramer, P. 登録日 2012-09-27 公開日 2012-11-14 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structure and Function of the Initially Transcribing RNA Polymerase II-TFIIB Complex Nature, 493, 2013
4BY7	elongating RNA Polymerase II-Bye1 TLD complex 分子名称: , 5'-D(*DAP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*DTP)-3', 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-18 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structures of RNA polymerase II complexes with Bye1, a chromatin-binding PHF3/DIDO homologue. Proc. Natl. Acad. Sci. U.S.A., 110, 2013
2VUM	Alpha-amanitin inhibited complete RNA polymerase II elongation complex 分子名称: 5'-D(*AP*AP*AP*CP*TP*AP*CP*TP*TP*GP *AP*GP*CP*T)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP *GP*TP*TP*AP*CP*GP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*AP*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3', ... 著者 Brueckner, F, Cramer, P. 登録日 2008-05-27 公開日 2008-06-17 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural Basis of Transcription Inhibition by Alpha-Amanitin and Implications for RNA Polymerase II Translocation. Nat.Struct.Mol.Biol., 15, 2008
4BY1	elongating RNA Polymerase II-Bye1 TLD complex soaked with AMPCPP 分子名称: 5'-D(*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*GP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*AP *TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*AP*T)-3', 5'-R(*UP*UP*CP*GP*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-17 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
4BXX	Arrested RNA polymerase II-Bye1 complex 分子名称: 5'-D(*AP*GP*CP*TP*AP*GP*CP*TP*TP*AP*CP*CP*TP*GP *GP*TP*GP* BRUP*TP*GP*CP*TP*CP*TP*AP*AP*DC)-3', 5'-D(*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP)-3', 5'-D(*GP*AP*GP*GP*TP*AP*AP*GP*CP*TP*AP*GP*CP*TP)-3', ... 著者 Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P. 登録日 2013-07-16 公開日 2013-09-11 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue Proc.Natl.Acad.Sci.USA, 110, 2013
1K83	Crystal Structure of Yeast RNA Polymerase II Complexed with the Inhibitor Alpha Amanitin 分子名称: ALPHA AMANITIN, DNA-DIRECTED RNA POLYMERASE II 13.6KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 14.2KD POLYPEPTIDE, ... 著者 Bushnell, D.A, Cramer, P, Kornberg, R.D. 登録日 2001-10-22 公開日 2002-02-13 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural Basis of Transcription: Alpha-Amanitin-RNA Polymerase II Cocrystal at 2.8 A Resolution. Proc.Natl.Acad.Sci.USA, 99, 2002
8Q3B	The closed state of the ASFV apo-RNA polymerase 分子名称: DNA-directed RNA polymerase RPB1 homolog, DNA-directed RNA polymerase RPB10 homolog, DNA-directed RNA polymerase RPB2 homolog, ... 著者 Pilotto, S, Sykora, M, Cackett, G, Werner, F. 登録日 2023-08-03 公開日 2024-02-14 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 Structure of the recombinant RNA polymerase from African Swine Fever Virus. Nat Commun, 15, 2024
8Q3K	The open state of the ASFV apo-RNA polymerase 分子名称: DNA-directed RNA polymerase RPB1 homolog, DNA-directed RNA polymerase RPB10 homolog, DNA-directed RNA polymerase RPB2 homolog, ... 著者 Pilotto, S, Sykora, M, Cackett, G, Werner, F. 登録日 2023-08-04 公開日 2024-02-14 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.92 Å) 主引用文献 Structure of the recombinant RNA polymerase from African Swine Fever Virus. Nat Commun, 15, 2024
4XHI	Crystal structure of native Thosea asigna virus RNA-dependent RNA polymerase (RdRP) at 2.15 Angstrom resolution 分子名称: GLYCEROL, RNA-dependent RNA polymerase, SULFATE ION 著者 Ferrero, D.S, Buxaderas, M, Rodriguez, J.F, Verdaguer, N. 登録日 2015-01-05 公開日 2015-11-04 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog., 11, 2015
7B7U	Cryo-EM structure of mammalian RNA polymerase II in complex with human RPAP2 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Fianu, I, Dienemann, C, Aibara, S, Schilbach, S, Cramer, P. 登録日 2020-12-11 公開日 2021-05-19 最終更新日 2022-02-16 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Cryo-EM structure of mammalian RNA polymerase II in complex with human RPAP2. Commun Biol, 4, 2021
3GTL	Backtracked RNA polymerase II complex with 13mer with G<>U mismatch 分子名称: DNA (28-MER), DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Wang, D, Bushnell, D.A, Huang, X, Westover, K.D, Levitt, M, Kornberg, R.D. 登録日 2009-03-27 公開日 2009-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.38 Å) 主引用文献 Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science, 324, 2009
3GTJ	Backtracked RNA polymerase II complex with 13mer RNA 分子名称: DNA (28-MER), DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Wang, D, Bushnell, D.A, Huang, X, Westover, K.D, Levitt, M, Kornberg, R.D. 登録日 2009-03-27 公開日 2009-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.42 Å) 主引用文献 Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science, 324, 2009
3GTK	Backtracked RNA polymerase II complex with 18mer RNA 分子名称: DNA (29-MER), DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Wang, D, Bushnell, D.A, Huang, X, Westover, K.D, Levitt, M, Kornberg, R.D. 登録日 2009-03-27 公開日 2009-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science, 324, 2009
3GTP	Backtracked RNA polymerase II complex with 24mer RNA 分子名称: DNA (28-MER), DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Wang, D, Bushnell, D.A, Huang, X, Westover, K.D, Levitt, M, Kornberg, R.D. 登録日 2009-03-27 公開日 2009-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science, 324, 2009
3GTM	Co-complex of Backtracked RNA polymerase II with TFIIS 分子名称: DNA (28-MER), DNA (5'-D(*CP*TP*GP*CP*TP*TP*AP*TP*CP*GP*GP*TP*AP*G)-3'), DNA-directed RNA polymerase II subunit RPB1, ... 著者 Wang, D, Bushnell, D.A, Huang, X, Westover, K.D, Levitt, M, Kornberg, R.D. 登録日 2009-03-27 公開日 2009-06-09 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science, 324, 2009

<567891011121314151617181920>