PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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5JXJ	Structure of the proprotein convertase furin complexed to meta-guanidinomethyl-Phac-RVR-Amba in presence of EDTA 分子名称: 2UC-ARG-VAL-ARG-00S, CALCIUM ION, CHLORIDE ION, ... 著者 Dahms, S.O, Arciniega, M, Steinmetzer, T, Huber, R, Than, M.E. 登録日 2016-05-13 公開日 2016-10-05 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of the unliganded form of the proprotein convertase furin suggests activation by a substrate-induced mechanism. Proc.Natl.Acad.Sci.USA, 113, 2016
3H03	Crystal structure of the binding domain of the AMPA subunit GluR2 bound to UBP277 分子名称: 3-[3-(2-carboxyethyl)-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl]-L-alanine, Glutamate receptor 2, ZINC ION 著者 Ahmed, A.H, Oswald, R.E. 登録日 2009-04-08 公開日 2009-05-05 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mechanisms of antagonism of the GluR2 AMPA receptor: structure and dynamics of the complex of two willardiine antagonists with the glutamate binding domain. Biochemistry, 48, 2009
7GU0	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster6 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-05 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
7A6A	1.15 A structure of human apoferritin obtained from Titan Mono- BCOR microscope 分子名称: Ferritin heavy chain, SODIUM ION 著者 Yip, K.M, Fischer, N, Chari, A, Stark, H. 登録日 2020-08-25 公開日 2020-09-02 最終更新日 2021-02-10 実験手法 ELECTRON MICROSCOPY (1.15 Å) 主引用文献 Atomic-resolution protein structure determination by cryo-EM. Nature, 587, 2020
7D56	Structure of the peptidylarginine deiminase type III (PAD3) in complex with Cl-amidine 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Funabashi, K, Unno, M. 登録日 2020-09-25 公開日 2021-06-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.175 Å) 主引用文献 Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design. Arch.Biochem.Biophys., 708, 2021
7GU1	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster7 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-05 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
2YCK	methyltransferase bound with tetrahydrofolate 分子名称: (6S)-5,6,7,8-TETRAHYDROFOLATE, 5-METHYLTETRAHYDROFOLATE CORRINOID/IRON SULFUR PROTEIN METHYLTRANSFERASE, GLYCEROL, ... 著者 Goetzl, S, Jeoung, J.-H, Hennig, S.E, Dobbek, H. 登録日 2011-03-16 公開日 2011-06-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-Coa Pathway J.Mol.Biol., 411, 2011
7OSH	ABC Transporter complex NosDFYL, R-domain 2 分子名称: COPPER (II) ION, Copper-binding lipoprotein NosL, MAGNESIUM ION, ... 著者 Mueller, C, Zhang, L, Lu, W, Du, J, Einsle, O. 登録日 2021-06-08 公開日 2022-06-22 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
2L8Y	Solution structure of the E. coli outer membrane protein RcsF (periplasmatic domain) 分子名称: Protein rcsF 著者 Rogov, V.V, Rogova, N.Y, Bernhard, F, Lohr, F, Doetsch, V. 登録日 2011-01-27 公開日 2011-04-06 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 A disulfide bridge network within the soluble periplasmic domain determines structure and function of the outer membrane protein RCSF. J.Biol.Chem., 286, 2011
7D5V	Structure of the C646A mutant of peptidylarginine deiminase type III (PAD3) 分子名称: 1,2-ETHANEDIOL, GLYCEROL, Protein-arginine deiminase type-3 著者 Akimoto, M, Mashimo, R, Unno, M. 登録日 2020-09-28 公開日 2021-06-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.102 Å) 主引用文献 Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design. Arch.Biochem.Biophys., 708, 2021
7GT1	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with FMOMB000209a 分子名称: (2S)-2-(2-chloro-6-fluorophenyl)-2,3-dihydroquinazolin-4(1H)-one, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
7GUB	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster19 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-05 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
7OSJ	ABC Transporter complex NosDFYL, membrane anchor 分子名称: COPPER (II) ION, Copper-binding lipoprotein NosL, MAGNESIUM ION, ... 著者 Mueller, C, Zhang, L, Lu, W, Du, J, Einsle, O. 登録日 2021-06-08 公開日 2022-06-22 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Molecular interplay of an assembly machinery for nitrous oxide reductase. Nature, 608, 2022
3H0Q	Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 3 分子名称: 4-({4-[(2-methylquinolin-6-yl)methyl]piperidin-1-yl}carbonyl)-2-phenylquinoline, Acetyl-CoA carboxylase 著者 Zhang, H, Tong, L. 登録日 2009-04-10 公開日 2010-04-21 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Discovery of small molecule isozyme non-specific inhibitors of mammalian acetyl-CoA carboxylase 1 and 2. Bioorg.Med.Chem.Lett., 20, 2010
7GUA	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster18 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-05 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
7DAN	Structure of the Ca2+-bound wild-type peptidylarginine deiminase type III (PAD3) 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Sawata, M, Unno, M. 登録日 2020-10-16 公開日 2021-06-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design. Arch.Biochem.Biophys., 708, 2021
2LAF	NMR solution structure of the N-terminal domain of the E. coli lipoprotein BamC 分子名称: Lipoprotein 34 著者 Pardi, A, Warner, L. 登録日 2011-03-11 公開日 2011-06-01 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structure of the BamC Two-Domain Protein Obtained by Rosetta with a Limited NMR Data Set. J.Mol.Biol., 411, 2011
7GT6	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with FMOOA000530a 分子名称: (3aS,8aS)-6-benzoyloctahydropyrrolo[3,4-d]azepin-1(2H)-one, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
2YZE	Crystal structure of uricase from Arthrobacter globiformis 分子名称: (dihydroxyboranyloxy-hydroxy-boranyl)oxylithium, Uricase 著者 Juan, E.C.M, Hossain, M.T, Hoque, M.M, Suzuki, K, Sekiguchi, T, Takenaka, A. 登録日 2007-05-05 公開日 2008-05-06 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.99 Å) 主引用文献 Trapping of the uric acid substrate in the crystal structure of urate oxidase from Arthrobacter globiformis To be Published
7GUC	PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster20 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-05 公開日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
7D4Y	Structure of human wild-type peptidylarginine deiminase type III (PAD3) 分子名称: Protein-arginine deiminase type-3 著者 Unno, M. 登録日 2020-09-24 公開日 2021-06-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.962 Å) 主引用文献 Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design. Arch.Biochem.Biophys., 708, 2021
7OS7	Circular permutant of ribosomal protein S6, swap helix 2, L75A, A92K mutant 分子名称: 30S ribosomal protein S6,30S ribosomal protein S6 著者 Wang, H, Logan, D.T, Oliveberg, M. 登録日 2021-06-08 公開日 2022-06-22 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Circular permutant of ribosomal protein S6, swap helix 2, L75A, A92K mutant To Be Published
7D5R	Structure of the Ca2+-bound C646A mutant of peptidylarginine deiminase type III (PAD3) 分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ... 著者 Mashimo, R, Akimoto, M, Unno, M. 登録日 2020-09-28 公開日 2021-06-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.148 Å) 主引用文献 Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design. Arch.Biochem.Biophys., 708, 2021
7GTE	PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with XST00000646b 分子名称: (5S)-5-(trifluoromethyl)-1,4-diazepane, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase non-receptor type 1 著者 Mehlman, T, Ginn, H.M, Keedy, D.A. 登録日 2024-01-03 公開日 2024-01-24 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 An expanded view of ligandability in the allosteric enzyme PTP1B from computational reanalysis of large-scale crystallographic data. Biorxiv, 2024
3GUR	Crystal Structure of mu class glutathione S-transferase (GSTM2-2) in complex with glutathione and 6-(7-Nitro-2,1,3-benzoxadiazol-4-ylthio)hexanol (NBDHEX) 分子名称: 1,2-ETHANEDIOL, GLUTATHIONE, Glutathione S-transferase Mu 2, ... 著者 Federici, L, Lo Sterzo, C, Di Matteo, A, Scaloni, F, Federici, G, Caccuri, A.M. 登録日 2009-03-30 公開日 2009-10-27 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the binding of the anticancer compound 6-(7-nitro-2,1,3-benzoxadiazol-4-ylthio)hexanol to human glutathione s-transferases Cancer Res., 69, 2009

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