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8JP8
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BU of 8jp8 by Molmil
Cryo-EM structure of the head region of full-length ERGIC-53 with MCFD2 (Substate C)
分子名称: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
著者Watanabe, S, Inaba, K.
登録日2023-06-10
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP7
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BU of 8jp7 by Molmil
Cryo-EM structure of the head region of full-length ERGIC-53 with MCFD2 (Substate B)
分子名称: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
著者Watanabe, S, Inaba, K.
登録日2023-06-10
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP6
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BU of 8jp6 by Molmil
Cryo-EM structures of the head region of full-length ERGIC-53 with MCFD2 (Substate A)
分子名称: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
著者Watanabe, S, Inaba, K.
登録日2023-06-10
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP5
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BU of 8jp5 by Molmil
Cryo-EM structures of the head region of full-length ERGIC-53 with MCFD2 (form B)
分子名称: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
著者Watanabe, S, Inaba, K.
登録日2023-06-10
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JP4
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BU of 8jp4 by Molmil
Cryo-EM structure of the head region of full-length ERGIC-53 with MCFD2 (form A)
分子名称: CALCIUM ION, Multiple coagulation factor deficiency protein 2, Protein ERGIC-53, ...
著者Watanabe, S, Inaba, K.
登録日2023-06-10
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Structure of full-length ERGIC-53 in complex with MCFD2 for cargo transport.
Nat Commun, 15, 2024
8JOW
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BU of 8jow by Molmil
Crystal structure of rabbit antibody with phosphorylated peptide bound
分子名称: ARG-PRO-HIS-PHE-PRO-GLN-PHE-SEP-TYR-SER-ALA-SER, Antibody (scFv), CHLORIDE ION
著者Caaveiro, J.M.M, Kawade, R, Tsumoto, K.
登録日2023-06-08
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Origin of high binding affinity and selectivity of phosphorylated epitope-specific rabbit antibodies
To Be Published
8JOT
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BU of 8jot by Molmil
Crystal structure of CSF-1R kinase domain with sulfatinib
分子名称: GLYCEROL, Macrophage colony-stimulating factor 1 receptor, N-(2-(dimethylamino)ethyl)-1-(3-((4-((2-methyl-1H-indol-5-yl)oxy)pyrimidin-2-yl)amino)phenyl)methanesulfonamide
著者Lin, Q.M, Chen, X.J, Chen, Y.H.
登録日2023-06-08
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Structural basis and selectivity of sulfatinib binding to FGFR and CSF-1R.
Commun Chem, 7, 2024
8JOP
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BU of 8jop by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with 11a
分子名称: 3C-like proteinase nsp5, methyl (6~{R})-5-ethanoyl-7-oxidanylidene-6-[4-(trifluoromethyl)phenyl]-8,9,10,11-tetrahydro-6~{H}-benzo[b][1,4]benzodiazepine-2-carboxylate
著者Zeng, R, Liu, Y.Z, Wang, F.L, Yang, S.Y, Lei, J.
登録日2023-06-08
公開日2023-08-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery of benzodiazepine derivatives as a new class of covalent inhibitors of SARS-CoV-2 main protease.
Bioorg.Med.Chem.Lett., 92, 2023
8JOK
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BU of 8jok by Molmil
Crystal structure of V30L mutated human transthyretin
分子名称: MAGNESIUM ION, Transthyretin
著者Mizuguchi, M, Yamada, S, Obita, T.
登録日2023-06-07
公開日2024-04-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Trypsin-induced aggregation of transthyretin Valine 30 variants associated with hereditary amyloidosis.
Febs J., 291, 2024
8JOG
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BU of 8jog by Molmil
solution structure of Ras Binding Domein (RBD) in C-RAF with negative allosteric modulator.
分子名称: RAF proto-oncogene serine/threonine-protein kinase
著者Makino, Y, Matsumoto, S, Yoshikawa, Y, Kawamura, T, Kumasaka, T, Shima, F.
登録日2023-06-07
公開日2024-06-12
実験手法SOLUTION NMR
主引用文献Small-molecule RAS/RAF-binding Inhibitors Allosterically Disrupt RAF Conformation and Exert Efficacy Against Broad-spectrum RAS-driven Cancers
To Be Published
8JOF
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BU of 8jof by Molmil
solution-structure of Ras Binding Domain (RBD) in C-RAF
分子名称: RAF proto-oncogene serine/threonine-protein kinase
著者Makino, Y, Matsumoto, S, Yoshikawa, Y, Kawamura, T, Kumasaka, T, Shima, F.
登録日2023-06-07
公開日2024-06-12
実験手法SOLUTION NMR
主引用文献Small-molecule RAS/RAF-binding Inhibitors Allosterically Disrupt RAF Conformation and Exert Efficacy Against Broad-spectrum RAS-driven Cancers
To Be Published
8JNX
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BU of 8jnx by Molmil
alkaline amylase Amy703 with truncated of N-terminus domain
分子名称: Alpha-amylase, CALCIUM ION
著者Xiang, L, Zhang, G, Zhou, J.
登録日2023-06-06
公開日2023-12-13
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (3.20279884 Å)
主引用文献N-terminal domain truncation yielded a unique dimer of polysaccharide hydrolase with enhanced enzymatic activity, stability and calcium ion independence.
Int.J.Biol.Macromol., 266, 2024
8JNW
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BU of 8jnw by Molmil
PfDXR - Mn2+ - NADPH - MAMK89 quaternary complex
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplastic, CALCIUM ION, ...
著者Takada, S, Sakamoto, Y, Tanaka, N.
登録日2023-06-08
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Reverse N -Substituted Hydroxamic Acid Derivatives of Fosmidomycin Target a Previously Unknown Subpocket of 1-Deoxy-d-xylulose 5-Phosphate Reductoisomerase (DXR).
Acs Infect Dis., 10, 2024
8JNV
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BU of 8jnv by Molmil
PfDXR - Mn2+ - MAMK89 ternary complex
分子名称: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplastic, CALCIUM ION, ...
著者Takada, S, Sakamoto, Y, Tanaka, N.
登録日2023-06-06
公開日2024-05-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Reverse N -Substituted Hydroxamic Acid Derivatives of Fosmidomycin Target a Previously Unknown Subpocket of 1-Deoxy-d-xylulose 5-Phosphate Reductoisomerase (DXR).
Acs Infect Dis., 10, 2024
8JNU
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BU of 8jnu by Molmil
Crystal structure of V30G mutated human transthyretin
分子名称: MAGNESIUM ION, Transthyretin
著者Mizuguchi, M, Yamada, S, Obita, T.
登録日2023-06-06
公開日2024-04-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Trypsin-induced aggregation of transthyretin Valine 30 variants associated with hereditary amyloidosis.
Febs J., 291, 2024
8JNT
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BU of 8jnt by Molmil
RxLR effector RxLR19 from Phytophthora capsici
分子名称: RxLR19781
著者Sheng, H, Zhang, X.G.
登録日2023-06-06
公開日2024-06-12
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Phytophthora capsici effector RxLR19 manipulates AsA biosynthesis pathway to promote infection by binding host GME protein
To Be Published
8JNI
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BU of 8jni by Molmil
Structure of AE2 in complex with PIP2
分子名称: Anion exchange protein 2, CHLORIDE ION, [(2R)-1-octadecanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phospho ryl]oxy-propan-2-yl] (8Z)-icosa-5,8,11,14-tetraenoate
著者Yin, Y.X, Ding, D.
登録日2023-06-06
公開日2024-02-07
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural and functional insights into the lipid regulation of human anion exchanger 2.
Nat Commun, 15, 2024
8JNF
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BU of 8jnf by Molmil
The cryo-EM structure of the RAD51 filament bound to the nucleosome
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-06-06
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (6.91 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8JNE
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BU of 8jne by Molmil
The cryo-EM structure of the decameric RAD51 ring bound to the nucleosome without the linker DNA binding
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-06-06
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.68 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8JND
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BU of 8jnd by Molmil
The cryo-EM structure of the nonameric RAD51 ring bound to the nucleosome with the linker DNA binding
分子名称: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
著者Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2023-06-06
公開日2024-03-27
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
8JNB
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BU of 8jnb by Molmil
CRAF ras-binding domain chimera, ligand complex
分子名称: 2-[4-[[(2S)-1-ethanoyl-3-oxidanylidene-2H-indol-2-yl]methyl]-2-methoxy-phenoxy]ethanamide, RAF proto-oncogene serine/threonine-protein kinase, CRaf
著者Kawamura, T, Kumasaka, T.
登録日2023-06-06
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Small-molecule RAS/RAF-binding Inhibitors Allosterically Disrupt RAF Conformation and Exert Efficacy Against Broad-spectrum RAS-driven Cancers
To Be Published
8JNA
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BU of 8jna by Molmil
CRAF ras-binding domain chimera, apo form
分子名称: RAF proto-oncogene serine/threonine-protein kinase, CRaf
著者Kawamura, T, Kumasaka, T.
登録日2023-06-06
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Small-molecule RAS/RAF-binding Inhibitors Allosterically Disrupt RAF Conformation and Exert Efficacy Against Broad-spectrum RAS-driven Cancers
To Be Published
8JMZ
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BU of 8jmz by Molmil
FGFR1 kinase domain with sulfatinib
分子名称: Fibroblast growth factor receptor 1, GLYCEROL, N-(2-(dimethylamino)ethyl)-1-(3-((4-((2-methyl-1H-indol-5-yl)oxy)pyrimidin-2-yl)amino)phenyl)methanesulfonamide, ...
著者Chen, X.J, Lin, Q.M, Chen, Y.H.
登録日2023-06-05
公開日2024-03-27
実験手法X-RAY DIFFRACTION (1.988 Å)
主引用文献Structural basis and selectivity of sulfatinib binding to FGFR and CSF-1R.
Commun Chem, 7, 2024
8JMS
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BU of 8jms by Molmil
Crystal structure of BelL from Streptomyces cavourensis
分子名称: BsmA domain containing protein
著者Shimo, S, Ushimaru, R, Mori, T, Abe, I.
登録日2023-06-05
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of BelL
To Be Published
8JMN
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BU of 8jmn by Molmil
Cryo-EM structure of the gastric proton pump with bound DQ-21
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[4-[[2-[(4-chlorophenyl)methoxy]phenyl]methoxy]phenyl]-N-methyl-methanamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Abe, K, Yokoshima, S, Yoshimori, A.
登録日2023-06-05
公開日2023-08-30
最終更新日2023-10-04
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献Deep learning driven de novo drug design based on gastric proton pump structures.
Commun Biol, 6, 2023

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件を2024-07-10に公開中

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