PDB: 225399 件ウェブページステータス検索Chemie searchBIRD

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6BUH	Crystal structure of a membrane protein, crystal form II 分子名称: D-alanyl carrier protein, D-alanyl transfer protein DltB 著者 Ma, D, Wang, Z, Xu, W. 登録日 2017-12-10 公開日 2018-10-10 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Crystal structure of a membrane-bound O-acyltransferase. Nature, 562, 2018
7E7M	Crystal Structure Analysis of the Streptococcus agalactiae Ribose Binding Protein RbsB 分子名称: D-ribose ABC transporter substrate-binding protein, beta-D-ribopyranose 著者 Pan, L.X, Wang, B, Yang, L.Y, Yang, D.F. 登録日 2021-02-26 公開日 2022-03-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Crystal Structure Analysis of the Streptococcus agalactiae Ribose Binding Protein RbsB To be published
6JXG	Crystasl Structure of Beta-glucosidase D2-BGL from Chaetomella Raphigera 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-glucosidase, alpha-D-mannopyranose 著者 Wang, A.H.-J, Lee, C.C, Kao, M.R, Ho, T.H.D. 登録日 2019-04-23 公開日 2019-11-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Chaetomella raphigerabeta-glucosidase D2-BGL has intriguing structural features and a high substrate affinity that renders it an efficient cellulase supplement for lignocellulosic biomass hydrolysis. Biotechnol Biofuels, 12, 2019
7CJ6	Crystal structure of homo dimeric D-allulose 3-epimerase from Methylomonas sp. in complex with D-allulose 分子名称: D-psicose, Epimerase, MANGANESE (II) ION 著者 Yoshida, H, Yoshihara, A, Kamitori, S. 登録日 2020-07-09 公開日 2021-04-21 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of a novel homodimeric l-ribulose 3-epimerase from Methylomonus sp. Febs Open Bio, 11, 2021
6B35	NMR ensemble of Tyrocidine A analogue AC3.28 分子名称: Tyrocidine A analogue D-PHE-BE2-PHE-D-PHE-ASN-LYS-TYR-VAL-ORN-LEU 著者 Cameron, A.J, Ewdards, P.J.B, Harjes, E, Sarojini, V. 登録日 2017-09-20 公開日 2017-12-06 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Tyrocidine A Analogues Bearing the Planar d-Phe-2-Abz Turn Motif: How Conformation Impacts Bioactivity. J. Med. Chem., 60, 2017
6LPP	Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with D-2-hydroxyglutarate (D-2-HG) 分子名称: (2R)-2-hydroxypentanedioic acid, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ... 著者 Yang, J, Zhu, H, Ding, J. 登録日 2020-01-12 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations. Cell Discov, 7, 2021
8TYI	NMR structure of L5pG ([p23W, G24W]kalata B1) 分子名称: Kalata-B1 著者 Tian, S, Craik, D.J, Conan, K.W. 登録日 2023-08-25 公開日 2024-03-13 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Nucleation of a key beta-turn promotes cyclotide oxidative folding. J.Biol.Chem., 300, 2024
6B34	NMR ensemble of Tyrocidine A analogue AC3.27 分子名称: Tyrocidine A analogue D-PHE-BE2-PHE-D-PHE-ASN-GLN-TYR-VAL-ORN-LEU 著者 Cameron, A.J, Ewdards, P.J.B, Harjes, E, Sarojini, V. 登録日 2017-09-20 公開日 2017-12-06 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Tyrocidine A Analogues Bearing the Planar d-Phe-2-Abz Turn Motif: How Conformation Impacts Bioactivity. J. Med. Chem., 60, 2017
4ME6	Crystal structure of D-alanine-D-alanine ligase A from Xanthomonas oryzae pathovar oryzae with ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase, MAGNESIUM ION 著者 Doan, T.T.N, Kim, J.K, Ahn, Y.J, Lee, B.M, Kang, L.W. 登録日 2013-08-25 公開日 2014-02-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of d-alanine-d-alanine ligase from Xanthomonas oryzae pv. oryzae alone and in complex with nucleotides Arch.Biochem.Biophys., 545C, 2014
5C9G	Crystal Structure of a Putative enoyl-CoA hydratase/isomerase family protein from Hyphomonas neptunium 分子名称: D-MALATE, Enoyl-CoA hydratase/isomerase family protein, TETRAETHYLENE GLYCOL 著者 Szlachta, K, Cooper, D.R, Chapman, H.C, Cymbrowski, M.T, Stead, M, Hillerich, B.S, Ahmed, M, Bonanno, J, Seidel, R, Almo, S.C, Minor, W, Hammonds, J, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2015-06-26 公開日 2015-10-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structure of a Putative enoyl-CoA hydratase/isomerase family protein from Hyphomonas neptunium to be published
7LUB	Crystal structure of recombinant human fumarase in complex with D-2-amino-3-phosphono-propionic acid 分子名称: D-2-AMINO-3-PHOSPHONO-PROPIONIC ACID, Fumarate hydratase, mitochondrial, ... 著者 Cardoso, I.A, Nonato, M.C. 登録日 2021-02-21 公開日 2022-02-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Protein-metabolite interactomics of carbohydrate metabolism reveal regulation of lactate dehydrogenase. Science, 379, 2023
6LPU	Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with L-2-hydroxyglutarate (L-2-HG) 分子名称: (2S)-2-HYDROXYPENTANEDIOIC ACID, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ... 著者 Yang, J, Zhu, H, Ding, J. 登録日 2020-01-12 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.923 Å) 主引用文献 Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations. Cell Discov, 7, 2021
6LPX	Crystal structure of human D-2-hydroxyglutarate dehydrogenase in complex with 2-oxoglutarate (2-OG) 分子名称: 2-OXOGLUTARIC ACID, D-2-hydroxyglutarate dehydrogenase, mitochondrial, ... 著者 Yang, J, Zhu, H, Ding, J. 登録日 2020-01-12 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure, substrate specificity, and catalytic mechanism of human D-2-HGDH and insights into pathogenicity of disease-associated mutations. Cell Discov, 7, 2021
5E6F	Canarypox virus resolvase 分子名称: CNPV261 Holliday junction resolvase protein, D(-)-TARTARIC ACID, MAGNESIUM ION 著者 Li, H, Hwang, Y, Perry, K, Bushman, F.D, Van Duyne, G.D. 登録日 2015-10-09 公開日 2016-03-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure and Metal Binding Properties of a Poxvirus Resolvase. J.Biol.Chem., 291, 2016
6VC1	Octreotide oxalate 分子名称: OXALATE ION, Octreotide 著者 Spiliopoulou, M, Karavassili, F, Triandafillidis, D, Valmas, A, Kosinas, C, Fili, S, Barlos, K, Barlos, K.K, Morin, M, Reinle-Schmitt, M, Gozzo, F, Margiolaki, I. 登録日 2019-12-20 公開日 2020-12-23 最終更新日 2021-05-19 実験手法 POWDER DIFFRACTION 主引用文献 New perspectives in macromolecular powder diffraction using single-photon-counting strip detectors: high-resolution structure of the pharmaceutical peptide octreotide. Acta Crystallogr.,Sect.A, 77, 2021
7YSF	Crystal structure of ZNF524 ZF1-4 in complex with telomeric DNA 分子名称: D-MALATE, DNA (5'-D(*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*CP*CP*C)-3'), ... 著者 Li, F.D, Xu, Z.Y. 登録日 2022-08-12 公開日 2023-08-16 最終更新日 2024-04-24 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 ZNF524 directly interacts with telomeric DNA and supports telomere integrity. Nat Commun, 14, 2023
4BC3	Crystal structure of human D-xylulokinase 分子名称: 1,2-ETHANEDIOL, XYLULOSE KINASE 著者 Bunker, R.D, Loomes, K.M, Baker, E.N. 登録日 2012-10-01 公開日 2012-11-28 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structure and Function of Human Xylulokinase, an Enzyme with Important Roles in Carbohydrate Metabolism J.Biol.Chem., 288, 2013
1J4A	INSIGHTS INTO DOMAIN CLOSURE, SUBSTRATE SPECIFICITY AND CATALYSIS OF D-LACTATE DEHYDROGENASE FROM LACTOBACILLUS BULGARICUS 分子名称: D-LACTATE DEHYDROGENASE, SULFATE ION 著者 Razeto, A, Kochhar, S, Hottinger, H, Dauter, M, Wilson, K.S, Lamzin, V.S. 登録日 2001-08-18 公開日 2002-05-29 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Domain closure, substrate specificity and catalysis of D-lactate dehydrogenase from Lactobacillus bulgaricus. J.Mol.Biol., 318, 2002
3VDR	Crystal structure of D-3-hydroxybutyrate dehydrogenase, prepared in the presence of the substrate D-3-hydroxybutyrate and NAD(+) 分子名称: (3R)-3-hydroxybutanoic acid, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, ACETOACETIC ACID, ... 著者 Hoque, M.M, Shimizu, S, Juan, E.C.M, Sato, Y, Hossain, M.T, Yamamoto, T, Imamura, S, Amano, H, Suzuki, K, Sekiguchi, T, Tsunoda, M, Takenaka, A. 登録日 2012-01-06 公開日 2012-02-08 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of D-3-hydroxybutyrate dehydrogenase prepared in the presence of the substrate D-3-hydroxybutyrate and NAD+. Acta Crystallogr.,Sect.F, 65, 2009
4D9E	D-Cysteine desulfhydrase from Salmonella typhimurium complexed with L-cycloserine (LCS) 分子名称: BENZAMIDINE, D-Cysteine desulfhydrase, [5-hydroxy-6-methyl-4-({[(4E)-3-oxo-1,2-oxazolidin-4-ylidene]amino}methyl)pyridin-3-yl]methyl dihydrogen phosphate 著者 Bharath, S.R, Shveta, B, Rajesh, K.H, Savithri, H.S, Murthy, M.R.N. 登録日 2012-01-11 公開日 2012-05-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase. Plos One, 7, 2012
4D96	D-Cysteine desulfhydrase from Salmonella typhimurium complexed with 1-amino-1-carboxycyclopropane (ACC) 分子名称: BENZAMIDINE, D-cysteine desulfhydrase, N-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-Y-LMETHYL]-1-AMINO-CYCLOPROPANECARBOXYLIC ACID, ... 著者 Bharath, S.R, Shveta, B, Rajesh, K.H, Savithri, H.S, Murthy, M.R.N. 登録日 2012-01-11 公開日 2012-05-30 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase. Plos One, 7, 2012
4D8U	Crystal structure of D-Cysteine desulfhydrase from Salmonella typhimurium at 3.3 A in monoclinic space group with 8 subunits in the asymmetric unit 分子名称: D-cysteine desulfhydrase, PHOSPHATE ION 著者 Bharath, S.R, Shveta, B, Rajesh, K.H, Savithri, H.S, Murthy, M.R.N. 登録日 2012-01-11 公開日 2012-05-30 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Structural and Mutational Studies on Substrate Specificity and Catalysis of Salmonella typhimurium D-Cysteine Desulfhydrase. Plos One, 7, 2012
7XPC	Complex structure of D-glycerate-3-kinase(GLYK) and AVRvnt1 分子名称: D-glycerate-3-kinase (GLYK), RxLR effector protein Avr-vnt11 著者 Hu, Q, Zhou, J, Yao, D, Xing, W. 登録日 2022-05-04 公開日 2023-06-07 実験手法 X-RAY DIFFRACTION (3.31 Å) 主引用文献 Chloroplast Protein GLYK Hijacked by Phytophthora Infestans Effector AVRvnt1 in Cytoplasm to Activate NLR To Be Published
1GUB	Hinge-bending motion of D-allose binding protein from Escherichia coli: three open conformations 分子名称: D-ALLOSE-BINDING PERIPLASMIC PROTEIN, NICKEL (II) ION 著者 Magnusson, U, Chaudhuri, B.N, Ko, J, Park, C, Jones, T.A, Mowbray, S.L. 登録日 2002-01-24 公開日 2003-03-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structure of D-Allose Binding Protein from Escherichia Coli Bound to D-Allose at 1.8 A Resolution J.Mol.Biol., 286, 1999
1GUD	Hinge-bending motion of D-allose binding protein from Escherichia coli: three open conformations 分子名称: D-ALLOSE-BINDING PERIPLASMIC PROTEIN, ZINC ION 著者 Magnusson, U, Chaudhuri, B.N, Ko, J, Park, C, Jones, T.A, Mowbray, S.L. 登録日 2002-01-24 公開日 2003-03-06 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.71 Å) 主引用文献 Structure of D-Allose Binding Protein from Escherichia Coli Bound to D-Allose at 1.8 A Resolution J.Mol.Biol., 286, 1999

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