PDB: 219886 件ウェブページステータス検索Chemie searchBIRD

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1CF2	THREE-DIMENSIONAL STRUCTURE OF D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC ARCHAEON METHANOTHERMUS FERVIDUS 分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTEIN (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE), SULFATE ION 著者 Charron, C, Talfournier, F, Isuppov, M.N, Branlant, G, Littlechild, J.A, Vitoux, B, Aubry, A. 登録日 1999-03-24 公開日 2000-03-29 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystallization and preliminary X-ray diffraction studies of D-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaeon Methanothermus fervidus. Acta Crystallogr.,Sect.D, 55, 1999
1DWU	Ribosomal protein L1 分子名称: RIBOSOMAL PROTEIN L1 著者 Tishchenko, S.V, Nevskaya, N.A, Pavelyev, M.N, Nikonov, S.V, Garber, M.B, Piendl, W. 登録日 1999-12-13 公開日 2000-12-07 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of Ribosomal Protein L1 from Methanococcus Thermolithotrophicus. Functionally Important Structural Invariants on the L1 Surface Acta Crystallogr.,Sect.D, 58, 2002
6JN6	Metallo-Beta-Lactamase VIM-2 in complex with Dual MBL/SBL Inhibitor MS19 分子名称: Beta-lactamase class B VIM-2, FORMIC ACID, ZINC ION, ... 著者 Li, G.-B, Liu, S. 登録日 2019-03-13 公開日 2019-07-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.602 Å) 主引用文献 Structure-Based Development of (1-(3'-Mercaptopropanamido)methyl)boronic Acid Derived Broad-Spectrum, Dual-Action Inhibitors of Metallo- and Serine-beta-lactamases. J.Med.Chem., 62, 2019
4VGC	GAMMA-CHYMOTRYPSIN D-NAPHTHYL-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX 分子名称: D-1-NAPHTHYL-2-ACETAMIDO-ETHANE BORONIC ACID, GAMMA CHYMOTRYPSIN, SULFATE ION 著者 Stoll, V.S, Eger, B.T, Hynes, R.C, Martichonok, V, Jones, J.B, Pai, E.F. 登録日 1997-05-01 公開日 1997-11-12 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Differences in binding modes of enantiomers of 1-acetamido boronic acid based protease inhibitors: crystal structures of gamma-chymotrypsin and subtilisin Carlsberg complexes. Biochemistry, 37, 1998
4W6Z	YEAST ALCOHOL DEHYDROGENASE I, SACCHAROMYCES CEREVISIAE FERMENTATIVE ENZYME 分子名称: Alcohol dehydrogenase 1, NICOTINAMIDE-8-IODO-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ... 著者 plapp, B.v, savarimuthu, b.r, ramaswamy, s. 登録日 2014-08-21 公開日 2014-09-03 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Yeast alcohol dehydrogenase structure and catalysis. Biochemistry, 53, 2014
6W3M	Solution NMR Structure of 5'UTR Stem Loop B in DENV4 Flavivirus. 分子名称: RNA (41-MER) 著者 Sharma, S, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-03-09 公開日 2020-09-23 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR structure of Dengue West Nile viruses stem-loop B: A key cis-acting element for flavivirus replication. Biochem.Biophys.Res.Commun., 531, 2020
7P3R	Helical structure of the toxin MakA from Vibrio cholera 分子名称: MakA tetramer 著者 Berg, A, Nadeem, A, Uhlin, B.E, Wai, S.N, Barandun, J. 登録日 2021-07-08 公開日 2022-02-23 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.65 Å) 主引用文献 Protein-lipid interaction at low pH induces oligomerization of the MakA cytotoxin from Vibrio cholerae . Elife, 11, 2022
7V0X	Local refinement of ankyrin-1 (C-terminal half), class 1 of erythrocyte ankyrin-1 complex 分子名称: Ankyrin-1 著者 Vallese, F, Kim, K, Yen, L.Y, Johnston, J.D, Noble, A.J, Cali, T, Clarke, O.B. 登録日 2022-05-11 公開日 2022-07-20 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Architecture of the human erythrocyte ankyrin-1 complex. Nat.Struct.Mol.Biol., 29, 2022
7TUJ	NMR solution structure of the phosphorylated MUS81-binding region from human SLX4 分子名称: Structure-specific endonuclease subunit SLX4 著者 Payliss, B.J, Reichheld, S.E, Lemak, A, Arrowsmith, C.H, Sharpe, S, Wyatt, H.D.M. 登録日 2022-02-02 公開日 2022-10-19 最終更新日 2022-11-09 実験手法 SOLUTION NMR 主引用文献 Phosphorylation of the DNA repair scaffold SLX4 drives folding of the SAP domain and activation of the MUS81-EME1 endonuclease. Cell Rep, 41, 2022
7N99	SDE2 SAP domain apo structure 分子名称: Isoform 2 of Replication stress response regulator SDE2 著者 Paung, Y, Weinheimer, A.S, Rageul, J, Khan, A, Ho, B, Tong, M, Alphonse, S, Seeliger, M.A, Kim, H. 登録日 2021-06-17 公開日 2022-10-12 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Extended DNA-binding interfaces beyond the canonical SAP domain contribute to the function of replication stress regulator SDE2 at DNA replication forks. J.Biol.Chem., 298, 2022
1CMU	THE ROLE OF ASPARTATE-235 IN THE BINDING OF CATIONS TO AN ARTIFICIAL CAVITY AT THE RADICAL SITE OF CYTOCHROME C PEROXIDASE 分子名称: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE 著者 Fitzgerald, M.M, Trester, M.L, Jensen, G.M, Mcree, D.E, Goodin, D.B. 登録日 1995-04-10 公開日 1995-07-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The role of aspartate-235 in the binding of cations to an artificial cavity at the radical site of cytochrome c peroxidase. Protein Sci., 4, 1995
1CKO	STRUCTURE OF MRNA CAPPING ENZYME IN COMPLEX WITH THE CAP ANALOG GPPPG 分子名称: DIGUANOSINE-5'-TRIPHOSPHATE, MRNA CAPPING ENZYME, ZINC ION 著者 Hakansson, K, Wigley, D.B. 登録日 1997-09-06 公開日 1998-01-28 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structure of a complex between a cap analogue and mRNA guanylyl transferase demonstrates the structural chemistry of RNA capping. Proc.Natl.Acad.Sci.USA, 95, 1998
1CMT	THE ROLE OF ASPARTATE-235 IN THE BINDING OF CATIONS TO AN ARTIFICIAL CAVITY AT THE RADICAL SITE OF CYTOCHROME C PEROXIDASE 分子名称: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE 著者 Fitzgerald, M.M, Trester, M.L, Jensen, G.M, Mcree, D.E, Goodin, D.B. 登録日 1995-04-11 公開日 1995-07-10 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The role of aspartate-235 in the binding of cations to an artificial cavity at the radical site of cytochrome c peroxidase. Protein Sci., 4, 1995
6OKU	CDTb Double Heptamer Long Form Mask 3 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry 分子名称: ADP-ribosyltransferase binding component 著者 Lacy, D.B, Sheedlo, M.J, Anderson, D.M. 登録日 2019-04-15 公開日 2019-10-30 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore. Nat Microbiol, 5, 2020
6OKS	CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry 分子名称: ADP-ribosyltransferase binding component 著者 Lacy, D.B, Sheedlo, M.J, Anderson, D.M. 登録日 2019-04-15 公開日 2019-10-30 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore. Nat Microbiol, 5, 2020
6OKT	CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry 分子名称: ADP-ribosyltransferase binding component 著者 Lacy, D.B, Sheedlo, M.J, Anderson, D.M. 登録日 2019-04-15 公開日 2019-10-30 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore. Nat Microbiol, 5, 2020
1CT2	CRYSTAL STRUCTURE OF THE OMTKY3 P1 VARIANT OMTKY3-THR18I IN COMPLEX WITH SGPB 分子名称: OVOMUCOID INHIBITOR, PROTEINASE B 著者 Bateman, K.S, Anderson, S, Lu, W, Qasim, M.A, Laskowski Jr, M, James, M.N. 登録日 1999-08-18 公開日 2000-01-12 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Deleterious effects of beta-branched residues in the S1 specificity pocket of Streptomyces griseus proteinase B (SGPB): crystal structures of the turkey ovomucoid third domain variants Ile18I, Val18I, Thr18I, and Ser18I in complex with SGPB. Protein Sci., 9, 2000
6OKR	CDTb Pre-Insertion form Modeled from Cryo-EM Map Reconstructed using C7 Symmetry 分子名称: ADP-ribosyltransferase binding component 著者 Lacy, D.B, Sheedlo, M.J, Anderson, D.M. 登録日 2019-04-15 公開日 2019-10-30 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural insights into the transition of Clostridioides difficile binary toxin from prepore to pore. Nat Microbiol, 5, 2020
1DDL	DESMODIUM YELLOW MOTTLE TYMOVIRUS 分子名称: DESMODIUM YELLOW MOTTLE VIRUS, RNA (5'-R(P*UP*U)-3'), RNA (5'-R(P*UP*UP*UP*UP*UP*UP*U)-3') 著者 Larson, S.B, Day, J, Canady, M.A, Greenwood, A, McPherson, A. 登録日 1999-11-10 公開日 2000-10-30 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Refined structure of desmodium yellow mottle tymovirus at 2.7 A resolution. J.Mol.Biol., 301, 2000
1E1Y	Flavopiridol inhibits glycogen phosphorylase by binding at the inhibitor site 分子名称: 2-(2-CHLORO-PHENYL)-5,7-DIHYDROXY-8-(3-HYDROXY-1-METHYL-PIPERIDIN-4-YL)-4H-BENZOPYRAN-4-ONE, GLYCOGEN PHOSPHORYLASE, MUSCLE FORM, ... 著者 Oikonomakos, N.G, Zographos, S.E, Skamnaki, V.T, Tsitsanou, K.E, Johnson, L.N. 登録日 2000-05-11 公開日 2000-05-17 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Flavopiridol Inhibits Glycogen Phosphorylase by Binding at the Inhibitor Site J.Biol.Chem., 275, 2000
5KTF	Structure of the C-terminal transmembrane domain of scavenger receptor BI (SR-BI) 分子名称: Scavenger receptor class B member 1 著者 Chadwick, A.C, Peterson, F.C, Volkman, B.F, Sahoo, D. 登録日 2016-07-11 公開日 2017-03-08 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR Structure of the C-Terminal Transmembrane Domain of the HDL Receptor, SR-BI, and a Functionally Relevant Leucine Zipper Motif. Structure, 25, 2017
7ZVO	Structure of CBM BT0996-C from Bacteroides thetaiotaomicron 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ALANINE, BETA-MERCAPTOETHANOL, ... 著者 Trovao, F, Pinheiro, B.A, Correia, V.G, Palma, A.S, Carvalho, A.L. 登録日 2022-05-16 公開日 2023-02-08 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The structure of a Bacteroides thetaiotaomicron carbohydrate-binding module provides new insight into the recognition of complex pectic polysaccharides by the human microbiome. J Struct Biol X, 7, 2023
1D16	STRUCTURE OF A T4 HAIRPIN LOOP ON A Z-DNA STEM AND COMPARISON WITH A-RNA AND B-DNA LOOPS 分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*GP*TP*TP*TP*TP*CP*GP*CP*GP*CP*G)-3') 著者 Chattopadhyaya, R, Grzeskowiak, K, Dickerson, R.E. 登録日 1988-04-12 公開日 1989-01-09 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of a T4 hairpin loop on a Z-DNA stem and comparison with A-RNA and B-DNA loops. J.Mol.Biol., 211, 1990
1CT4	CRYSTAL STRUCTURE OF THE OMTKY3 P1 VARIANT OMTKY3-VAL18I IN COMPLEX WITH SGPB 分子名称: OVOMUCOID INHIBITOR, PROTEINASE B 著者 Bateman, K.S, Anderson, S, Lu, W, Qasim, M.A, Laskowski Jr, M, James, M.N.G. 登録日 1999-08-18 公開日 2000-01-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Deleterious effects of beta-branched residues in the S1 specificity pocket of Streptomyces griseus proteinase B (SGPB): crystal structures of the turkey ovomucoid third domain variants Ile18I, Val18I, Thr18I, and Ser18I in complex with SGPB. Protein Sci., 9, 2000
1CZG	STRUCTURE OF THE G62T MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT 分子名称: SHIGA TOXIN B-CHAIN 著者 Ling, H, Bast, D, Brunton, J.L, Read, R.J. 登録日 1999-09-03 公開日 2000-09-13 最終更新日 2021-11-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 STRUCTURE OF THE G62T MUTANT OF SHIGA-LIKE TOXIN I B SUBUNIT To be Published

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