PDB: 46006 件ウェブページステータス検索Chemie searchBIRD

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4HZR	Crystal structure of Ack1 kinase domain 分子名称: 1,2-ETHANEDIOL, Activated CDC42 kinase 1, CHLORIDE ION, ... 著者 Gajiwala, K.S. 登録日 2012-11-15 公開日 2013-02-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.31 Å) 主引用文献 Ack1: activation and regulation by allostery. Plos One, 8, 2013
5PZQ	Human liver fructose-1,6-bisphosphatase 1 (fructose 1,6-bisphosphate 1-phosphatase, E.C.3.1.3.11) complexed with the allosteric inhibitor 2-(4-methoxyphenyl)furan-3,4-dicarboxylic acid 分子名称: 2-(4-methoxyphenyl)furan-3,4-dicarboxylic acid, Fructose-1,6-bisphosphatase 1 著者 Ruf, A, Joseph, C, Alker, A, Banner, D, Tetaz, T, Benz, J, Kuhn, B, Rudolph, M.G, Yang, H, Shao, C, Burley, S.K. 登録日 2017-04-16 公開日 2019-01-09 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Human liver fructose-1,6-bisphosphatase 1 (fructose 1,6-bisphosphate 1-phosphatase, E.C.3.1.3.11) complexed with the allosteric inhibitor 2-(4-methoxyphenyl)furan-3,4-dicarboxylic acid To be published
5Q07	Human liver fructose-1,6-bisphosphatase 1 (fructose 1,6-bisphosphate 1-phosphatase, E.C.3.1.3.11) complexed with the allosteric inhibitor 1-(4-bromo-6-morpholin-4-ylpyridin-2-yl)-3-[5-(2-methoxyethyl)-4-methylthiophen-2-yl]sulfonylurea 分子名称: Fructose-1,6-bisphosphatase 1, N-{[4-bromo-6-(morpholin-4-yl)pyridin-2-yl]carbamoyl}-5-(2-methoxyethyl)-4-methylthiophene-2-sulfonamide 著者 Ruf, A, Joseph, C, Alker, A, Banner, D, Tetaz, T, Benz, J, Kuhn, B, Rudolph, M.G, Yang, H, Shao, C, Burley, S.K. 登録日 2017-04-16 公開日 2019-01-09 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.424 Å) 主引用文献 Human liver fructose-1,6-bisphosphatase 1 (fructose 1,6-bisphosphate 1-phosphatase, E.C.3.1.3.11) complexed with the allosteric inhibitor 1-(4-bromo-6-morpholin-4-ylpyridin-2-yl)-3-[5-(2-methoxyethyl)-4-methylthiophen-2-yl]sulfonylurea To be published
4I59	Cyclohexylamine Oxidase from Brevibacterium oxydans IH-35A complexed with cyclohexanone 分子名称: CYCLOHEXANONE, Cyclohexylamine Oxidase, FLAVIN-ADENINE DINUCLEOTIDE 著者 Mirza, I.A, Berghuis, A.M. 登録日 2012-11-28 公開日 2013-05-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.93 Å) 主引用文献 Structural Analysis of a Novel Cyclohexylamine Oxidase from Brevibacterium oxydans IH-35A. Plos One, 8, 2013
5MME	Crystal structure of CREBBP bromodomain complexd with US46C 分子名称: CREB-binding protein, dimethyl 5-[(5-ethanoyl-2-ethoxy-phenyl)amino]benzene-1,3-dicarboxylate 著者 Zhu, J, Caflisch, A. 登録日 2016-12-09 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Binding Motifs in the CBP Bromodomain: An Analysis of 20 Crystal Structures of Complexes with Small Molecules. ACS Med Chem Lett, 9, 2018
6UCG	Retinoic acid receptor-related orphan receptor (ROR) gamma in complex with allosteric compound 28 分子名称: (3S,4R)-1-[1-(2-chloro-6-cyclopropylbenzene-1-carbonyl)-4-fluoro-1H-indazol-3-yl]-3-hydroxypiperidine-4-carboxylic acid, Nuclear receptor ROR-gamma 著者 Palte, R.L, Parthasarathy, G. 登録日 2019-09-16 公開日 2020-03-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.87 Å) 主引用文献 Discovery ofN-(Indazol-3-yl)piperidine-4-carboxylic Acids as ROR gamma t Allosteric Inhibitors for Autoimmune Diseases. Acs Med.Chem.Lett., 11, 2020
5PZW	Human liver fructose-1,6-bisphosphatase 1 (fructose 1,6-bisphosphate 1-phosphatase, E.C.3.1.3.11) complexed with the allosteric inhibitor 1-(3-chlorophenyl)sulfonyl-3-[5-[(3-chlorophenyl)sulfonylcarbamoylamino]pentyl]urea 分子名称: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, Fructose-1,6-bisphosphatase 1, N,N'-(pentane-1,5-diyldicarbamoyl)bis(3-chlorobenzene-1-sulfonamide) 著者 Ruf, A, Joseph, C, Alker, A, Banner, D, Tetaz, T, Benz, J, Kuhn, B, Rudolph, M.G, Yang, H, Shao, C, Burley, S.K. 登録日 2017-04-16 公開日 2019-01-09 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Human liver fructose-1,6-bisphosphatase 1 (fructose 1,6-bisphosphate 1-phosphatase, E.C.3.1.3.11) complexed with the allosteric inhibitor 1-(3-chlorophenyl)sulfonyl-3-[5-[(3-chlorophenyl)sulfonylcarbamoylamino]pentyl]urea To be published
5Q0B	Human liver fructose-1,6-bisphosphatase 1 (fructose 1,6-bisphosphate 1-phosphatase, E.C.3.1.3.11) complexed with the allosteric inhibitor 1-(4-bromo-3-methyl-1,2-thiazol-5-yl)-3-(3-methylphenyl)sulfonylurea 分子名称: Fructose-1,6-bisphosphatase 1, N-[(4-bromo-3-methyl-1,2-thiazol-5-yl)carbamoyl]-3-methylbenzene-1-sulfonamide 著者 Ruf, A, Joseph, C, Alker, A, Banner, D, Tetaz, T, Benz, J, Kuhn, B, Rudolph, M.G, Yang, H, Shao, C, Burley, S.K. 登録日 2017-04-18 公開日 2019-01-09 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Human liver fructose-1,6-bisphosphatase 1 (fructose 1,6-bisphosphate 1-phosphatase, E.C.3.1.3.11) complexed with the allosteric inhibitor 1-(4-bromo-3-methyl-1,2-thiazol-5-yl)-3-(3-methylphenyl)sulfonylurea To be published
8D6J	Human Ago2 bound to miR122(21nt) with PIWI loop swapped to AtAgo10 sequence 分子名称: MAGNESIUM ION, Protein argonaute-2, RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3') 著者 Xiao, Y, MacRae, I. 登録日 2022-06-06 公開日 2023-05-03 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A tiny loop in the Argonaute PIWI domain tunes small RNA seed strength. Embo Rep., 24, 2023
5FQO	Crystal structure of M. musculus protein arginine methyltransferase PRMT6 with SAH and magnesium 分子名称: MAGNESIUM ION, PROTEIN ARGININE N-METHYLTRANSFERASE 6, S-ADENOSYL-L-HOMOCYSTEINE 著者 Bonnefond, L, Cavarelli, J. 登録日 2015-12-14 公開日 2017-01-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.899 Å) 主引用文献 Crystal Strcutures of Prmt6 in Complex with Sah in Alternative Conformations To be Published
4HQP	Alpha7 nicotinic receptor chimera and its complex with Alpha bungarotoxin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-bungarotoxin isoform V31, ... 著者 Li, S.X, Cheng, K, Gomoto, R, Bren, N, Huang, S, Sine, S, Chen, L. 登録日 2012-10-25 公開日 2013-07-17 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.51 Å) 主引用文献 Structural principles for Alpha-neurotoxin binding to and selectivity among nicotinic receptors To be Published
5FQN	Crystal structure of M. musculus protein arginine methyltransferase PRMT6 with SAH at 1.65 Angstroms 分子名称: PROTEIN ARGININE METHYLTRANSFERASE 6, S-ADENOSYL-L-HOMOCYSTEINE 著者 Bonnefond, L, Cavarelli, J. 登録日 2015-12-14 公開日 2017-01-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.657 Å) 主引用文献 Crystal Strcutures of Prmt6 in Complex with Sah in Alternative Conformations To be Published
5MGV	Kinetic and Structural Changes in HsmtPheRS, Induced by Pathogenic Mutations in Human FARS2 分子名称: Phenylalanine--tRNA ligase, mitochondrial 著者 Kartvelishvili, E, Tworowski, D, Vernon, H, Chrzanowska-Lightowlers, Z, Moor, N, Wang, J, Wong, L.-J, Safro, M. 登録日 2016-11-22 公開日 2017-05-03 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Kinetic and structural changes in HsmtPheRS, induced by pathogenic mutations in human FARS2. Protein Sci., 26, 2017
3S2W	The crystal structure of a MarR transcriptional regulator from Methanosarcina mazei Go1 分子名称: SULFATE ION, Transcriptional regulator, MarR family 著者 Tan, K, Li, H, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2011-05-17 公開日 2011-06-22 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.453 Å) 主引用文献 The crystal structure of a MarR transcriptional regulator from Methanosarcina mazei Go1 To be Published
8D71	Human Ago2 bound to miR122(21nt) 分子名称: MAGNESIUM ION, Protein argonaute-2, miR-122-21nt 著者 Xiao, Y, MacRae, I. 登録日 2022-06-07 公開日 2023-05-03 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A tiny loop in the Argonaute PIWI domain tunes small RNA seed strength. Embo Rep., 24, 2023
5MQG	Crystal structure of CREBBP bromodomain complexed with CBP015 分子名称: 1-(4-azanyl-3-methoxy-phenyl)ethanone, CREB-binding protein 著者 Zhu, J, Spiliotopoulos, D, Caflisch, A. 登録日 2016-12-20 公開日 2017-04-19 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Virtual screen to NMR (VS2NMR): Discovery of fragment hits for the CBP bromodomain. Bioorg. Med. Chem. Lett., 27, 2017
5MPZ	Crystal structure of CREBBP bromodomain complexed with CBP007 分子名称: CREB-binding protein, methyl 2-oxidanylidene-3~{H}-1,3-benzoxazole-6-carboxylate 著者 Zhu, J, Spiliotopoulos, D, Caflisch, A. 登録日 2016-12-19 公開日 2017-05-10 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Virtual screen to NMR (VS2NMR): Discovery of fragment hits for the CBP bromodomain. Bioorg. Med. Chem. Lett., 27, 2017
1GV0	Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases 分子名称: MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Dalhus, B, Sarinen, M, Sauer, U.H, Eklund, P, Johansson, K, Karlsson, A, Ramaswamy, S, Bjork, A, Synstad, B, Naterstad, K, Sirevag, R, Eklund, H. 登録日 2002-02-04 公開日 2002-02-15 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural Basis for Thermophilic Protein Stability: Structures of Thermophilic and Mesophilic Malate Dehydrogenases J.Mol.Biol., 318, 2002
5MG0	Structure of PAS-GAF fragment of Deinococcus phytochrome by serial femtosecond crystallography 分子名称: 1,2-ETHANEDIOL, 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome, ... 著者 Burgie, E.S, Fuller, F.D, Gul, S, Miller, M.D, Young, I.D, Brewster, A.S, Clinger, J, Aller, P, Braeuer, P, Hutchison, C, Alonso-Mori, R, Kern, J, Yachandra, V.K, Yano, J, Sauter, N.K, Phillips Jr, G.N, Vierstra, R.D, Orville, A.M. 登録日 2016-11-20 公開日 2017-02-22 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers. Nat. Methods, 14, 2017
5M6S	folding intermediate of spectrin R16 分子名称: spectrin 著者 Nilsson, O.B, Nickson, A.A, Clarke, J. 登録日 2016-10-25 公開日 2017-01-11 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Cotranslational folding of spectrin domains via partially structured states. Nat. Struct. Mol. Biol., 24, 2017
5GTO	Human PPARgamma ligand binding dmain complexed with S35 分子名称: 2-[4-[5-[(1~{S})-1-[(3,5-dimethoxyphenyl)carbamoyl-(phenylmethyl)carbamoyl]oxypropyl]-1,2-oxazol-3-yl]phenoxy]-2-methyl-propanoic acid, GLYCEROL, MYRISTIC ACID, ... 著者 Jang, J.Y, Suh, S.W. 登録日 2016-08-22 公開日 2017-07-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site. Biochim. Biophys. Acta, 1865, 2017
5GID	Crystal structure of VDR in complex with DLAM-4 (C2 form) 分子名称: (3R,5S)-5-[(2R)-2-[(1R,3aS,4E,7aR)-7a-methyl-4-[(2Z)-2-[(3S,5R)-2-methylidene-3,5-bis(oxidanyl)cyclohexylidene]ethylidene]-2,3,3a,5,6,7-hexahydro-1H-inden-1-yl]propyl]-3-methyl-3-oxidanyl-1-(4-phenylbutyl)pyrrolidin-2-one, SRC1, Vitamin D3 receptor 著者 Asano, L, Shimizu, T. 登録日 2016-06-23 公開日 2016-12-07 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.151 Å) 主引用文献 Regulation of the vitamin D receptor by vitamin D lactam derivatives. Febs Lett., 590, 2016
8DK4	Peroxisome proliferator-activated receptor gamma in complex with VSP-51-2 分子名称: 5-(benzylcarbamoyl)-1-[(4-chloro-3-fluorophenyl)methyl]-1H-indole-2-carboxylic acid, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha 著者 Ma, L, Zhou, X.E, Suino-Powell, K, Hou, N, Zhou, Z, Luo, J, Xu, H.E, Yi, W. 登録日 2022-07-02 公開日 2023-07-05 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Identification of VSP-51-2 as the Novel and Safe PPAR gamma Modulator: Structure-Based Design, Biological Validation and Crystal Analysis To Be Published
2A61	The crystal structure of transcriptional regulator Tm0710 from Thermotoga maritima 分子名称: transcriptional regulator Tm0710 著者 Lunin, V.V, Evdokimova, E, Kudritska, M, Chang, C, Joachimiak, A, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG) 登録日 2005-07-01 公開日 2005-07-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 The crystal structure of transcriptional regulator Tm0710 from Thermotoga maritima To be Published
5GTP	The agonist-free structure of human PPARgamma ligand binding domain in the presence of the SRC-1 coactivator peptide 分子名称: GLYCEROL, MYRISTIC ACID, Nuclear receptor coactivator 1, ... 著者 Jang, J.Y, Suh, S.W. 登録日 2016-08-23 公開日 2017-07-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Structural basis for differential activities of enantiomeric PPAR gamma agonists: Binding of S35 to the alternate site. Biochim. Biophys. Acta, 1865, 2017

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