PDB: 45677 件ウェブページステータス検索Chemie searchBIRD

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6VK8	Crystal Structure of Methylosinus trichosporium OB3b Soluble Methane Monooxygenase Hydroxylase and Regulatory Component Complex with small organic carboxylate at active center 分子名称: 1,2-ETHANEDIOL, BENZOIC ACID, FE (III) ION, ... 著者 Jones, J.C, Banerjee, R, Shi, K, Aihara, H, Lipscomb, J.D. 登録日 2020-01-18 公開日 2020-08-05 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Structural Studies of theMethylosinus trichosporiumOB3b Soluble Methane Monooxygenase Hydroxylase and Regulatory Component Complex Reveal a Transient Substrate Tunnel. Biochemistry, 59, 2020
8G2A	Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution 分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ... 著者 Aleksandrova, E.V, Wu, K.J.Y, Tresco, B.I.C, Syroegin, E.A, Killeavy, E.E, Balasanyants, S.M, Svetlov, M.S, Gregory, S.T, Atkinson, G.C, Myers, A.G, Polikanov, Y.S. 登録日 2023-02-03 公開日 2023-12-27 最終更新日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Structural basis of Cfr-mediated antimicrobial resistance and mechanisms to evade it. Nat.Chem.Biol., 20, 2024
6VL5	BG505 SOSIP reconstructed from a designed tetrahedral nanoparticle, BG505 SOSIP-T33_dn2 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2(7S) - gp120, ... 著者 Ward, A.B, Antanasijevic, A. 登録日 2020-01-22 公開日 2020-08-12 最終更新日 2020-09-02 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Targeting HIV Env immunogens to B cell follicles in nonhuman primates through immune complex or protein nanoparticle formulations. NPJ Vaccines, 5, 2020
6VLX	Crystal structure of FabI from Alistipes finegoldii 分子名称: Enoyl-[acyl-carrier-protein] reductase [NADH], GLYCEROL 著者 Radka, C.D, Seetharaman, J, Rock, C.O. 登録日 2020-01-27 公開日 2020-04-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 The genome of a Bacteroidetes inhabitant of the human gut encodes a structurally distinct enoyl-acyl carrier protein reductase (FabI). J.Biol.Chem., 295, 2020
1ENZ	CRYSTAL STRUCTURE AND FUNCTION OF THE ISONIAZID TARGET OF MYCOBACTERIUM TUBERCULOSIS 分子名称: ENOYL-ACYL CARRIER PROTEIN (ACP) REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Dessen, A, Quemard, A, Blanchard, J.S, Jacobs Jr, W.R, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC) 登録日 1995-01-27 公開日 1996-01-29 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure and function of the isoniazid target of Mycobacterium tuberculosis. Science, 267, 1995
6VLR	BG505 SOSIP.v5.2 in complex with rhesus macaque Fab RM20E1 and PGT122 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIPv5.2 gp41, ... 著者 Cottrell, C.A, Ward, A.B. 登録日 2020-01-24 公開日 2020-06-24 最終更新日 2020-09-16 実験手法 ELECTRON MICROSCOPY (4.42 Å) 主引用文献 Mapping the immunogenic landscape of near-native HIV-1 envelope trimers in non-human primates. Plos Pathog., 16, 2020
8G5Z	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state) 分子名称: 1,4-DIAMINOBUTANE, 18S rRNA, 28S rRNA, ... 著者 Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C. 登録日 2023-02-14 公開日 2023-04-19 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.64 Å) 主引用文献 mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
8GAS	vFP48.02 Fab in complex with BG505 DS-SOSIP Env trimer 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... 著者 Gorman, J, Kwong, P.D. 登録日 2023-02-23 公開日 2023-04-19 最終更新日 2023-06-14 実験手法 ELECTRON MICROSCOPY (4.04 Å) 主引用文献 Diverse Murine Vaccinations Reveal Distinct Antibody Classes to Target Fusion Peptide and Variation in Peptide Length to Improve HIV Neutralization. J.Virol., 97, 2023
6VMK	Crystal structure of human Complement Factor D with anti-Factor D Fab 20D12 分子名称: Complement factor D, Fab Y49R heavy chain, Fab Y49R light chain, ... 著者 Wu, P, Harris, S.F, Eigenbrot, C. 登録日 2020-01-28 公開日 2021-02-03 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.01 Å) 主引用文献 Crystal structure of human Complement Factor D with anti-Factor D Fab 20D12 To Be Published
8G6J	mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state 2) 分子名称: (3R,6R,9S,12S,15S,18S,20R,24aR)-6-[(2S)-butan-2-yl]-3,12-bis[(1R)-1-hydroxy-2-methylpropyl]-8,9,11,17,18-pentamethyl-15-[(2S)-2-methylbutyl]hexadecahydropyrido[1,2-a][1,4,7,10,13,16,19]heptaazacyclohenicosine-1,4,7,10,13,16,19(21H)-heptone, (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 1,4-DIAMINOBUTANE, ... 著者 Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C. 登録日 2023-02-15 公開日 2023-04-19 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
8G85	vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... 著者 Gorman, J, Kwong, P.D. 登録日 2023-02-17 公開日 2023-04-19 最終更新日 2023-06-14 実験手法 ELECTRON MICROSCOPY (3.99 Å) 主引用文献 Diverse Murine Vaccinations Reveal Distinct Antibody Classes to Target Fusion Peptide and Variation in Peptide Length to Improve HIV Neutralization. J.Virol., 97, 2023
8G9B	Human IMPDH2 mutant - L245P, treated with GTP, ATP, IMP, and NAD+; compressed filament segment reconstruction 分子名称: ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, INOSINIC ACID, ... 著者 O'Neill, A.G, Kollman, J.M. 登録日 2023-02-21 公開日 2023-04-19 最終更新日 2023-08-09 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Neurodevelopmental disorder mutations in the purine biosynthetic enzyme IMPDH2 disrupt its allosteric regulation. J.Biol.Chem., 299, 2023
8G5Y	mRNA decoding in human is kinetically and structurally distinct from bacteria (IC state) 分子名称: 1,4-DIAMINOBUTANE, 18S rRNA, 28S rRNA, ... 著者 Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C. 登録日 2023-02-14 公開日 2023-04-19 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.29 Å) 主引用文献 mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
1E5Z	Azurin from Pseudomonas aeruginosa, reduced form, pH 9.0 分子名称: AZURIN, COPPER (II) ION, NITRATE ION 著者 Nar, H, Messerschmidt, A. 登録日 2000-08-04 公開日 2000-08-19 最終更新日 2017-07-05 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Rontgenkristallographische Strukturaufklarung Von Azurin Aus Pseudomonas Aeruginosa Ph.D. Thesis, 1992
8G60	mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state) 分子名称: 1,4-DIAMINOBUTANE, 18S rRNA, 28S rRNA, ... 著者 Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C. 登録日 2023-02-14 公開日 2023-04-19 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.54 Å) 主引用文献 mRNA decoding in human is kinetically and structurally distinct from bacteria. Nature, 617, 2023
8GHU	Methyltransferase RmtC bound to the 30S ribosomal subunit 分子名称: 16S rRNA, 16S rRNA (guanine(1405)-N(7))-methyltransferase, 30S ribosomal protein S12, ... 著者 Srinivas, P, Conn, G.L, Dunham, C.M. 登録日 2023-03-12 公開日 2023-04-12 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 30S subunit recognition and G1405 modification by the aminoglycoside-resistance 16S ribosomal RNA methyltransferase RmtC. Biorxiv, 2023
6VRK	Cryo-EM structure of the wild-type human serotonin transporter complexed with Br-paroxetine and 8B6 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 8B6 antibody, heavy chain, ... 著者 Coleman, J.A, Navratna, V, Yang, D. 登録日 2020-02-07 公開日 2020-03-11 最終更新日 2020-09-23 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Chemical and structural investigation of the paroxetine-human serotonin transporter complex. Elife, 9, 2020
8OIR	55S human mitochondrial ribosome with mtRF1 and P-site tRNA 分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
1ERI	X-RAY STRUCTURE OF THE DNA-ECO RI ENDONUCLEASE-DNA RECOGNITION COMPLEX: THE RECOGNITION NETWORK AND THE INTEGRATION OF RECOGNITION AND CLEAVAGE 分子名称: DNA (5'-D(*TP*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), PROTEIN (ECO RI ENDONUCLEASE (E.C.3.1.21.4)) 著者 Kim, Y, Grable, J.C, Love, R, Greene, P.J, Rosenberg, J.M. 登録日 1994-05-18 公開日 1995-02-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Refinement of Eco RI endonuclease crystal structure: a revised protein chain tracing. Science, 249, 1990
8OIS	28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA 分子名称: 12S rRNA, 28S ribosomal protein S10, mitochondrial, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
1E77	COMPLEX OF ACTIVE MUTANT (Q365->C) OF GLUCOSE 6-PHOSPHATE DEHYDROGENASE FROM LEUCONOSTOC MESENTEROIDES WITH SUBSTRATE 分子名称: 6-O-phosphono-beta-D-glucopyranose, CALCIUM ION, GLUCOSE 6-PHOSPHATE 1-DEHYDROGENASE 著者 Adams, M.J, Vandeputte-Rutten, L, Gover, S. 登録日 2000-08-24 公開日 2000-12-11 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 An Examination of the Role of Asp-177 in the His-Asp Catalytic Dyad of Leuconostoc Mesenteroides Glucose 6-Phosphate Dehydrogenase: X-Ray Structure and Ph Dependence of Kinetic Parameters of the D177N Mutant Enzyme Biochemistry, 39, 2000
1ES0	CRYSTAL STRUCTURE OF THE MURINE CLASS II ALLELE I-A(G7) COMPLEXED WITH THE GLUTAMIC ACID DECARBOXYLASE (GAD65) PEPTIDE 207-220 分子名称: 65 KD GLUTAMIC ACID DECARBOXYLASE+H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN 著者 Corper, A.L, Teyton, L, Wilson, I.A. 登録日 2000-04-07 公開日 2000-06-28 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A structural framework for deciphering the link between I-Ag7 and autoimmune diabetes. Science, 288, 2000
8OIN	55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA 分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S15, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
8OIT	39S human mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA 分子名称: 16S rRNA, 39S ribosomal protein L1, mitochondrial, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
8G38	Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate 分子名称: 16S, 23S, 30S ribosomal protein S10, ... 著者 Bhattacharjee, S, Brown, P.Z, Frank, J. 登録日 2023-02-07 公開日 2023-12-06 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Time resolution in cryo-EM using a PDMS-based microfluidic chip assembly and its application to the study of HflX-mediated ribosome recycling. Cell, 187, 2024

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