PDB: 219886 件ウェブページステータス検索Chemie searchBIRD

---

8HCB	SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (2 RBD up) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB13-292 Fab, ... 著者 Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X. 登録日 2022-11-01 公開日 2023-01-25 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (4.18 Å) 主引用文献 Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants. Nat Commun, 14, 2023
5RSA	COMPARISON OF TWO INDEPENDENTLY REFINED MODELS OF RIBONUCLEASE-A 分子名称: PHOSPHATE ION, RIBONUCLEASE A 著者 Wlodawer, A. 登録日 1985-04-29 公開日 1985-07-17 最終更新日 2023-03-15 実験手法 NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION 主引用文献 Comparison of Two Independently Refined Models of Ribonuclease-A Acta Crystallogr.,Sect.B, 42, 1986
8HC3	SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 2 YB9-258 Fabs (2 RBD up) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB9-258, ... 著者 Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X. 登録日 2022-11-01 公開日 2023-01-25 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (4.35 Å) 主引用文献 Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants. Nat Commun, 14, 2023
8HC4	SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32 Fab, ... 著者 Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X. 登録日 2022-11-01 公開日 2023-01-25 最終更新日 2023-05-03 実験手法 ELECTRON MICROSCOPY (3.54 Å) 主引用文献 Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants. Nat Commun, 14, 2023
8HCA	SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (1 RBD up) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB13-292 Fab, ... 著者 Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X. 登録日 2022-11-01 公開日 2023-01-25 最終更新日 2023-05-03 実験手法 ELECTRON MICROSCOPY (4.35 Å) 主引用文献 Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants. Nat Commun, 14, 2023
7B7D	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... 著者 Ranjan, N, Pochopien, A.A, Wu, C.C, Beckert, B, Blanchet, S, Green, R, Rodnina, M.V, Wilson, D.N. 登録日 2020-12-10 公開日 2021-03-10 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 eEF3 promotes late stages of tRNA translocation including E-tRNA release from the ribosome To Be Published
8HC9	SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (3 RBD down) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB13-292 Fab, ... 著者 Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X. 登録日 2022-11-01 公開日 2023-01-25 最終更新日 2023-08-02 実験手法 ELECTRON MICROSCOPY (6.03 Å) 主引用文献 Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants. Nat Commun, 14, 2023
8HC2	SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 1 YB9-258 Fab (1 RBD up) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of YB9-258 Fab, ... 著者 Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X. 登録日 2022-11-01 公開日 2023-01-25 最終更新日 2023-08-02 実験手法 ELECTRON MICROSCOPY (6.21 Å) 主引用文献 Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants. Nat Commun, 14, 2023
4WAS	STRUCTURE OF THE ETR1P/NADP/CROTONYL-COA COMPLEX 分子名称: CROTONYL COENZYME A, Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, ... 著者 Quade, N, Voegeli, B, Rosenthal, R, Capitani, G, Erb, T.J. 登録日 2014-08-31 公開日 2015-03-18 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The use of ene adducts to study and engineer enoyl-thioester reductases. Nat.Chem.Biol., 11, 2015
3M8Y	Phosphopentomutase from Bacillus cereus after glucose-1,6-bisphosphate activation 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ... 著者 Panosian, T.D, Nannemann, D.P, Watkins, G, Wadzinski, B, Bachmann, B.O, Iverson, T.M. 登録日 2010-03-19 公開日 2010-12-29 最終更新日 2019-07-17 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle. J.Biol.Chem., 286, 2011
7SIH	Crystal Structure of HLA B*3503 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I 分子名称: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ... 著者 Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M. 登録日 2021-10-14 公開日 2022-11-23 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Molecular insights into the HLA-B35 molecules' classification associated with HIV control. Immunol.Cell.Biol., 102, 2024
7SIG	Crystal Structure of HLA B*3501 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I 分子名称: Beta-2-microglobulin, CITRATE ANION, MHC class I antigen, ... 著者 Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M. 登録日 2021-10-14 公開日 2022-11-23 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.741 Å) 主引用文献 Molecular insights into the HLA-B35 molecules' classification associated with HIV control. Immunol.Cell.Biol., 102, 2024
4UMK	The complex of Spo0J and parS DNA in chromosomal partition system 分子名称: DNA, PROBABLE CHROMOSOME-PARTITIONING PROTEIN PARB, SULFATE ION 著者 Chen, B.W, Chu, C.H, Tung, J.Y, Hsu, C.E, Hsiao, C.D, Sun, Y.J. 登録日 2014-05-19 公開日 2015-05-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.096 Å) 主引用文献 Insights into ParB spreading from the complex structure of Spo0J and parS. Proc. Natl. Acad. Sci. U.S.A., 112, 2015
1S88	NMR structure of a DNA duplex with two INA nucleotides inserted opposite each other, dCTCAACXCAAGCT:dAGCTTGXGTTGAG 分子名称: 5'-D(*AP*GP*CP*TP*TP*GP*(2DM)P*GP*TP*TP*GP*AP*G)-3', 5'-D(*CP*TP*CP*AP*AP*CP*(2DM)P*CP*AP*AP*GP*CP*T)-3' 著者 Nielsen, C.B, Petersen, M, Pedersen, E.B, Hansen, P.E, Christensen, U.B. 登録日 2004-01-31 公開日 2004-05-25 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 NMR structure determination of a modified DNA oligonucleotide containing a new intercalating nucleic acid. Bioconjug.Chem., 15, 2004
4K4W	Poliovirus polymerase elongation complex (r5+2_form) 分子名称: RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*AP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*AP*GP*AP*UP*GP*AP*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3'), RNA-directed RNA polymerase 3D-POL 著者 Gong, P, Peersen, O.B. 登録日 2013-04-12 公開日 2013-05-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Structures of coxsackievirus, rhinovirus, and poliovirus polymerase elongation complexes solved by engineering RNA mediated crystal contacts. Plos One, 8, 2013
6Q86	Structure of Fucosylated D-antimicrobial peptide SB4 in complex with the Fucose-binding lectin PA-IIL at 2.008 Angstrom resolution 分子名称: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, AMINO GROUP, CALCIUM ION, ... 著者 Baeriswyl, S, Stocker, A, Reymond, J.L. 登録日 2018-12-14 公開日 2019-03-20 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.008 Å) 主引用文献 X-ray Crystal Structures of Short Antimicrobial Peptides as Pseudomonas aeruginosa Lectin B Complexes. Acs Chem.Biol., 14, 2019
4V7H	Structure of the 80S rRNA and proteins and P/E tRNA for eukaryotic ribosome based on cryo-EM map of Thermomyces lanuginosus ribosome at 8.9A resolution 分子名称: 18S rRNA, 26S ribosomal RNA, 40S ribosomal protein S0(A), ... 著者 Taylor, D.J, Devkota, B, Huang, A.D, Topf, M, Narayanan, E, Sali, A, Harvey, S.C, Frank, J. 登録日 2009-09-22 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (8.9 Å) 主引用文献 Comprehensive molecular structure of the eukaryotic ribosome. Structure, 17, 2009
4V99	The Crystallographic Structure of Panicum Mosaic Virus 分子名称: 5'-R(P*UP*UP*AP*AP*UP*AP*UP*UP*UP*UP*UP*AP*UP*UP*UP*UP*U)-3', CALCIUM ION, Capsid protein 著者 Makino, D.L, Larson, S.B, McPherson, A. 登録日 2012-07-04 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 The crystallographic structure of Panicum Mosaic Virus (PMV). J.Struct.Biol., 181, 2013
4UW2	Crystal structure of Csm1 in T.onnurineus 分子名称: CSM1 著者 Jung, T.Y, An, Y, Park, K.H, Lee, M.H, Oh, B.H, Woo, E.J. 登録日 2014-08-08 公開日 2015-03-25 最終更新日 2015-09-23 実験手法 X-RAY DIFFRACTION (2.632 Å) 主引用文献 Crystal Structure of the Csm1 Subunit of the Csm Complex and its Single-Stranded DNA-Specific Nuclease Activity. Structure, 23, 2015
4V2T	Membrane embedded pleurotolysin pore with 13 fold symmetry 分子名称: PLEUROTOLYSIN A, PLEUROTOLYSIN B 著者 Lukoyanova, N, Kondos, S.C, Farabella, I, Law, R.H.P, Reboul, C.F, Caradoc-Davies, T.T, Spicer, B.A, Kleifeld, O, Perugini, M, Ekkel, S, Hatfaludi, T, Oliver, K, Hotze, E.M, Tweten, R.K, Whisstock, J.C, Topf, M, Dunstone, M.A, Saibil, H.R. 登録日 2014-10-15 公開日 2015-02-18 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (11 Å) 主引用文献 Conformational Changes During Pore Formation by the Perforin-Related Protein Pleurotolysin. Plos Biol., 13, 2015
4V3E	The CIDRa domain from IT4var07 PfEMP1 bound to endothelial protein C receptor 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENDOTHELIAL PROTEIN C RECEPTOR, ... 著者 Lau, C.K.Y, Turner, L, Jespersen, J.S, Lowe, E.D, Petersen, B, Wang, C.W, Petersen, J.E.V, Lusingu, J, Theander, T.G, Lavstsen, T, Higgins, M.K. 登録日 2014-10-17 公開日 2014-12-17 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural Conservation Despite Huge Sequence Diversity Allows Epcr Binding by the Pfemp1 Family Implicated in Severe Childhood Malaria. Cell Host Microbe., 17, 2015
2TMN	CRYSTALLOGRAPHIC STRUCTURAL ANALYSIS OF PHOSPHORAMIDATES AS INHIBITORS AND TRANSITION-STATE ANALOGS OF THERMOLYSIN 分子名称: CALCIUM ION, N~2~-phosphono-L-leucinamide, Thermolysin, ... 著者 Tronrud, D.E, Monzingo, A.F, Matthews, B.W. 登録日 1987-06-29 公開日 1989-01-09 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystallographic structural analysis of phosphoramidates as inhibitors and transition-state analogs of thermolysin. Eur.J.Biochem., 157, 1986
7SIF	Crystal Structure of HLA B*3505 in complex with NPDIVIYQY, an 9-mer epitope from HIV-I 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-2-microglobulin, ... 著者 Gras, S, Lobos, C.A, Chatzileontiadou, D.S.M. 登録日 2021-10-14 公開日 2022-11-23 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Molecular insights into the HLA-B35 molecules' classification associated with HIV control. Immunol.Cell.Biol., 102, 2024
6QKJ	EgtB from Chloracidobacterium thermophilum, a type II sulfoxide synthase in complex with N,N,N-trimethyl-histidine 分子名称: CHLORIDE ION, FE (III) ION, IMIDAZOLE, ... 著者 Stampfli, A.R, Badri, B.N, Schirmer, T, Seebeck, F.P. 登録日 2019-01-29 公開日 2019-03-27 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 An Alternative Active Site Architecture for O2Activation in the Ergothioneine Biosynthetic EgtB from Chloracidobacterium thermophilum. J.Am.Chem.Soc., 141, 2019
4V3N	Membrane bound pleurotolysin prepore (TMH2 strand lock) trapped with engineered disulphide cross-link 分子名称: PLEUROTOLYSIN A, PLEUROTOLYSIN B 著者 Lukoyanova, N, Kondos, S.C, Farabella, I, Law, R.H.P, Reboul, C.F, Caradoc-Davies, T.T, Spicer, B.A, Kleifeld, O, Perugini, M, Ekkel, S, Hatfaludi, T, Oliver, K, Hotze, E.M, Tweten, R.K, Whisstock, J.C, Topf, M, Dunstone, M.A, Saibil, H.R. 登録日 2014-10-20 公開日 2015-02-18 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (14 Å) 主引用文献 Conformational Changes During Pore Formation by the Perforin-Related Protein Pleurotolysin. Plos Biol., 13, 2015

<105106107108109110111112113114115116117118119120>