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7T83
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Structure of angiotensin II type I receptor (AT1R) nanobody antagonist AT118i4h32
分子名称: CITRATE ANION, Nanobody AT118i4h32
著者Skiba, M.A, Kruse, A.C.
登録日2021-12-15
公開日2022-12-07
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An in silico method to assess antibody fragment polyreactivity.
Nat Commun, 13, 2022
6TKE
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ChiLob 7/4 H2 HC-C224S Kappa LC-C214S F(ab')2
分子名称: ChiLob 7/4 H2 heavy chain C224S, ChiLob 7/4 H2 kappa chain C214S
著者Orr, C.M, Fisher, H, Tews, I.
登録日2019-11-28
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Hinge disulfides in human IgG2 CD40 antibodies modulate receptor signaling by regulation of conformation and flexibility.
Sci Immunol, 7, 2022
6TKD
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ChiLob 7/4 H2 HC-C228S F(ab')2
分子名称: Chilob 7/4 H2 heavy chain C228S, Chilob 7/4 H2 kappa chain
著者Orr, C.M, Fisher, H, Tews, I.
登録日2019-11-28
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Hinge disulfides in human IgG2 CD40 antibodies modulate receptor signaling by regulation of conformation and flexibility.
Sci Immunol, 7, 2022
6TKC
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ChiLob 7/4 H2 HC-C225S F(ab')2
分子名称: Chilob 7/4 H2 heavy chain C225S, Chilob 7/4 H2 kappa chain
著者Orr, C.M, Fisher, H, Tews, I.
登録日2019-11-28
公開日2021-06-09
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Hinge disulfides in human IgG2 CD40 antibodies modulate receptor signaling by regulation of conformation and flexibility.
Sci Immunol, 7, 2022
7DZW
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Apo spike protein from SARS-CoV2
分子名称: Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
2R8S
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BU of 2r8s by Molmil
High resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domain
分子名称: Fab heavy chain, Fab light chain, MAGNESIUM ION, ...
著者Ye, J.D, Tereshko, V, Sidhu, S.S, Koide, S, Kossiakoff, A.A, Piccirilli, J.A.
登録日2007-09-11
公開日2007-12-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Synthetic antibodies for specific recognition and crystallization of structured RNA
Proc.Natl.Acad.Sci.Usa, 105, 2008
4UV4
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BU of 4uv4 by Molmil
Crystal structure of anti-FPR Fpro0165 Fab fragment
分子名称: FPRO0165 FAB
著者Douthwaite, J.A, Sridharan, S, Huntington, C, Marwood, R, Hammersley, J, Hakulinen, J.K, Ek, M, Sjogren, T, Rider, D, Privezentzev, C, Seaman, J.C, Cariuk, P, Knights, V, Young, J, Wilkinson, T, Sleeman, M, Finch, D.K, Lowe, D.C, Vaughan, T.J.
登録日2014-08-04
公開日2014-12-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Affinity Maturation of a Novel Antagonistic Human Monoclonal Antibody with a Long Vh Cdr3 Targeting the Class a Gpcr Formyl-Peptide Receptor 1.
Mabs, 7, 2015
4WCY
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BU of 4wcy by Molmil
Fab fragment of mouse AZ130 monoclonal antibody
分子名称: AZ130 Heavy chain, AZ130 Light chain, GLYCEROL, ...
著者Fallecker, C, Tarbouriech, N, Habib, M, Crepin, T, Drouet, E.
登録日2014-09-05
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Fab fragment of mouse AZ130 monoclonal antibody
To Be Published
2I60
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Crystal structure of [Phe23]M47, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 GP120 envelope glycoprotein and anti-HIV-1 antibody 17B
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B HEAVY CHAIN, ANTIBODY 17B LIGHT CHAIN, ...
著者Huang, C.-C, Kwong, P.D.
登録日2006-08-26
公開日2006-10-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Combinatorial optimization of a CD4-mimetic miniprotein and cocrystal structures with HIV-1 gp120 envelope glycoprotein.
J.Mol.Biol., 382, 2008
4IDJ
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S.Aureus a-hemolysin monomer in complex with Fab
分子名称: Alpha-hemolysin, Fab Heavy chain, Fab Light chain, ...
著者Strop, P.
登録日2012-12-12
公開日2013-06-26
最終更新日2021-05-26
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Mechanism of Action and In Vivo Efficacy of a Human-Derived Antibody against Staphylococcus aureus alpha-Hemolysin.
J.Mol.Biol., 425, 2013
2IFF
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BU of 2iff by Molmil
STRUCTURE OF AN ANTIBODY-LYSOZYME COMPLEX: EFFECT OF A CONSERVATIVE MUTATION
分子名称: HEN EGG WHITE LYSOZYME, IGG1 HYHEL-5 FAB (HEAVY CHAIN), IGG1 HYHEL-5 FAB (LIGHT CHAIN)
著者Chacko, S, Davies, D.R.
登録日1994-02-03
公開日1994-05-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structure of an antibody-lysozyme complex unexpected effect of conservative mutation.
J.Mol.Biol., 245, 1995
3EOT
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BU of 3eot by Molmil
Crystal structure of LAC031, an engineered anti-VLA1 Fab
分子名称: FAB FRAGMENT, HEAVY CHAIN, LIGHT CHAIN
著者Boriack-Sjodin, P.A, Clark, L.A.
登録日2008-09-29
公開日2009-01-20
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献An antibody loop replacement design feasibility study and a loop-swapped dimer structure.
Protein Eng.Des.Sel., 22, 2009
1SVZ
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BU of 1svz by Molmil
Crystal structure of the single-chain Fv fragment 1696 in complex with the epitope peptide corresponding to N-terminus of HIV-2 protease
分子名称: epitope peptide corresponding to N-terminus of HIV-2 protease, single-chain Fv fragment 1696
著者Rezacova, P, Brynda, J, Lescar, J, Bentley, G.A, Fabry, M, Horejsi, M, Sedlacek, J.
登録日2004-03-30
公開日2005-03-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of a cross-reaction complex between an anti-HIV-1 protease antibody and an HIV-2 protease peptide
J.Struct.Biol., 149, 2005
5V6L
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BU of 5v6l by Molmil
Crystal Structure of Rabbit Anti-HIV-1 gp120 V3 Fab 10A37 in complex with V3 peptide JR-FL
分子名称: Envelope glycoprotein, v3 region, Heavy chain of Fab fragment of rabbit anti-HIV1 gp120 V3 mAb 10A37, ...
著者Pan, R, Kong, X.-P.
登録日2017-03-17
公開日2018-01-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.549 Å)
主引用文献Increased epitope complexity correlated with antibody affinity maturation and a novel binding mode revealed by structures of rabbit antibodies against the third variable loop (V3) of HIV-1 gp120.
J. Virol., 2018
8A47
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IdeS in complex with IgG1 Fc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, IgG-degrading protease, ...
著者Sudol, A.S.L, Tews, I, Crispin, M.
登録日2022-06-10
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.338 Å)
主引用文献Extensive substrate recognition by the streptococcal antibody-degrading enzymes IdeS and EndoS.
Nat Commun, 13, 2022
8A49
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Endoglycosidase S in complex with IgG1 Fc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, IgG1 Fc, Secreted endoglycosidase EndoS
著者Sudol, A.S.L, Tews, I, Crispin, M.
登録日2022-06-10
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Extensive substrate recognition by the streptococcal antibody-degrading enzymes IdeS and EndoS.
Nat Commun, 13, 2022
8A48
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Less crystallisable" IgG1 Fc fragment (E382S variant)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, IgG1 Fc, ...
著者Sudol, A.S.L, Tews, I, Crispin, M.
登録日2022-06-10
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.044 Å)
主引用文献Extensive substrate recognition by the streptococcal antibody-degrading enzymes IdeS and EndoS.
Nat Commun, 13, 2022
2VL5
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Structure of anti-collagen type II FAb CIIC1
分子名称: CIIC1 ANTICOLLAGEN FAB
著者Uysal, H, Sehnert, B, Nandakumar, K.S, Boiers, U, Burkhardt, H, Holmdahl, R, Thunnissen, M.M.
登録日2008-01-08
公開日2008-03-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of the Pathogenic Collagen Type II-Specific Mouse Monoclonal Antibody Ciic1 Fab: Structure to Function Analysis.
Mol.Immunol., 45, 2008
2VIR
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BU of 2vir by Molmil
INFLUENZA VIRUS HEMAGGLUTININ COMPLEXED WITH A NEUTRALIZING ANTIBODY
分子名称: HEMAGGLUTININ, IMMUNOGLOBULIN (IGG1, LAMBDA), ...
著者Bizebard, T, Fleury, D, Gigant, B, Wharton, S.A, Skehel, J.J, Knossow, M.
登録日1997-12-22
公開日1998-04-29
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Antigen distortion allows influenza virus to escape neutralization.
Nat.Struct.Biol., 5, 1998
8A64
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cryoEM structure of the catalytically inactive EndoS from S. pyogenes in complex with the Fc region of immunoglobulin G1.
分子名称: Endo-beta-N-acetylglucosaminidase F2, Immunoglobulin gamma-1 heavy chain, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Trastoy, B, Cifuente, J.O, Du, J.J, Sundberg, E.J, Guerin, M.E.
登録日2022-06-16
公開日2023-04-05
最終更新日2023-07-26
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Mechanism of antibody-specific deglycosylation and immune evasion by Streptococcal IgG-specific endoglycosidases.
Nat Commun, 14, 2023
7O52
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CD22 d6-d7 in complex with Fab m971
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD22 d6-d7 Ig domains, GLYCEROL, ...
著者Ereno-Orbea, J, Sicard, T, Julien, J.P.
登録日2021-04-07
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Structural details of monoclonal antibody m971 recognition of the membrane-proximal domain of CD22.
J.Biol.Chem., 297, 2021
7O4Y
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m971 Fab in complex with anti-Kappa VHH domain
分子名称: Anti-Kappa VHH domain, m971 Fab heavy chain, m971 Fab light chain
著者Ereno-Orbea, J, Sicard, T, Julien, J.P.
登録日2021-04-07
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural details of monoclonal antibody m971 recognition of the membrane-proximal domain of CD22.
J.Biol.Chem., 297, 2021
8A44
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Plasmodium vivax Duffy binding protein region II bound the DARC ectodomain and monoclonal antibody DB1
分子名称: Atypical chemokine receptor 1, Duffy binding protein, Heavy chain of monoclonal antibody DB1, ...
著者Moskovitz, R, Higgins, M.K.
登録日2022-06-10
公開日2023-06-07
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural basis for DARC binding in reticulocyte invasion by Plasmodium vivax.
Nat Commun, 14, 2023
4R7N
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Fab C2E3
分子名称: Fab C2E3 Heavy chain, Fab C2E3 Light chain
著者Loyau, J, Didelot, G, Malinge, P, Ravn, U, Magistrelli, G, Depoisier, J.F, Kosco-Vilbois, M, Fischer, N, Thore, S, Rousseau, F.
登録日2014-08-28
公開日2015-07-29
最終更新日2015-08-26
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Robust Antibody-Antigen Complexes Prediction Generated by Combining Sequence Analyses, Mutagenesis, In Vitro Evolution, X-ray Crystallography and In Silico Docking.
J.Mol.Biol., 427, 2015
4R7D
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Fab Hu 15C1
分子名称: Fab Hu 15C1 Heavy chain, Fab Hu 15C1 Light chain
著者Loyau, J, Didelot, G, Malinge, P, Ravn, U, Magistrelli, G, Depoisier, J.F, Kosco-Vilbois, M, Fischer, N, Thore, S, Rousseau, F.
登録日2014-08-27
公開日2015-07-29
最終更新日2015-08-26
実験手法X-RAY DIFFRACTION (2.753 Å)
主引用文献Robust Antibody-Antigen Complexes Prediction Generated by Combining Sequence Analyses, Mutagenesis, In Vitro Evolution, X-ray Crystallography and In Silico Docking.
J.Mol.Biol., 427, 2015

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