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4RPX
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BU of 4rpx by Molmil
Precatalytic ternary complex of Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG) and dCTP in the presence of CaCl2
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ACETATE ION, CALCIUM ION, ...
著者Vyas, R, Suo, Z.
登録日2014-10-31
公開日2015-04-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography.
J.Am.Chem.Soc., 137, 2015
7FPX
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BU of 7fpx by Molmil
DHFR:NADP+:FOL complex at 300 K (crystal 1)
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Greisman, J.B, Dalton, K.M, Brookner, D.E, Hekstra, D.R.
登録日2022-09-10
公開日2023-09-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism.
Proc.Natl.Acad.Sci.USA, 121, 2024
4RQB
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Crystal Structure of a Hypoxanthine Phosphoribosyltransferase (target ID NYSGRC-029686) from Staphylococcus aureus (tetragonal space group)
分子名称: CHLORIDE ION, GLYCEROL, Hypoxanthine phosphoribosyltransferase, ...
著者Ghosh, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2014-10-31
公開日2014-11-26
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal Structure of a Hypoxanthine Phosphoribosyltransferase (target ID NYSGRC-029686) from Staphylococcus aureus (tetragonal space group)
To be Published
7FPL
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DHFR:NADP+:FOL complex at 280 K (crystal 1)
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Greisman, J.B, Dalton, K.M, Brookner, D.E, Hekstra, D.R.
登録日2022-09-09
公開日2023-09-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism.
Proc.Natl.Acad.Sci.USA, 121, 2024
7FQ1
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BU of 7fq1 by Molmil
DHFR:NADP+:FOL complex at 300 K (crystal 5)
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Greisman, J.B, Dalton, K.M, Brookner, D.E, Hekstra, D.R.
登録日2022-09-10
公開日2023-09-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism.
Proc.Natl.Acad.Sci.USA, 121, 2024
7FQ6
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BU of 7fq6 by Molmil
DHFR:NADP+:FOL complex at 310 K (multi-crystal)
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Greisman, J.B, Dalton, K.M, Brookner, D.E, Hekstra, D.R.
登録日2022-09-12
公開日2023-09-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism.
Proc.Natl.Acad.Sci.USA, 121, 2024
7FQA
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BU of 7fqa by Molmil
DHFR:NADP+:FOL complex (crystal 1, pass 4, 280 K)
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Greisman, J.B, Dalton, K.M, Brookner, D.E, Hekstra, D.R.
登録日2022-09-12
公開日2023-09-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism.
Proc.Natl.Acad.Sci.USA, 121, 2024
7FQD
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BU of 7fqd by Molmil
DHFR:NADP+:FOL complex (crystal 2, pass 2, 280 K)
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
著者Greisman, J.B, Dalton, K.M, Brookner, D.E, Hekstra, D.R.
登録日2022-09-12
公開日2023-09-20
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Perturbative diffraction methods resolve a conformational switch that facilitates a two-step enzymatic mechanism.
Proc.Natl.Acad.Sci.USA, 121, 2024
7USD
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BU of 7usd by Molmil
Cryo-EM structure of D-site Rac1-bound WAVE Regulatory Complex
分子名称: Abl interactor 2, Cytoplasmic FMR1-interacting protein 1, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Ding, B, Yang, S, Chen, B, Chowdhury, S.
登録日2022-04-25
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures reveal a key mechanism of WAVE regulatory complex activation by Rac1 GTPase.
Nat Commun, 13, 2022
7USE
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BU of 7use by Molmil
Cryo-EM structure of WAVE regulatory complex with Rac1 bound on both A and D site
分子名称: Abl interactor 2, Cytoplasmic FMR1-interacting protein 1, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Ding, B, Yang, S, Chen, B, Chowdhury, S.
登録日2022-04-25
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures reveal a key mechanism of WAVE regulatory complex activation by Rac1 GTPase.
Nat Commun, 13, 2022
5AYX
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BU of 5ayx by Molmil
Crystal structure of Human Quinolinate Phosphoribosyltransferase
分子名称: Nicotinate-nucleotide pyrophosphorylase [carboxylating]
著者Kang, G.B, Kim, M.-K, Im, Y.J, Lee, J.H, Youn, H.-S, An, J.Y, Lee, J.-G, Fukuoka, S.-I, Eom, S.H.
登録日2015-09-14
公開日2016-02-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Insights into the Quaternary Catalytic Mechanism of Hexameric Human Quinolinate Phosphoribosyltransferase, a Key Enzyme in de novo NAD Biosynthesis
Sci Rep, 6, 2016
6DIA
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BU of 6dia by Molmil
DNA polymerase beta substrate complex with templating cytosine and incoming Fapy-dGTP analog
分子名称: 1-[2-amino-5-(formylamino)-6-oxo-1,6-dihydropyrimidin-4-yl]-2,5-anhydro-1,3-dideoxy-6-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-D-ribo-hexitol, CALCIUM ION, DNA (5'-D(*CP*CP*GP*AP*CP*CP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
著者Freudenthal, B.D, Smith, M.R, Wilson, S.H, Beard, W.A.
登録日2018-05-23
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.969 Å)
主引用文献A guardian residue hinders insertion of a Fapy•dGTP analog by modulating the open-closed DNA polymerase transition.
Nucleic Acids Res., 47, 2019
7UN1
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BU of 7un1 by Molmil
8-nm repeat of the human sperm tip singlet microtubule
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Gui, M, Croft, J.T, Zabeo, D, Acharya, V, Kollman, J.M, Burgoyne, T, Hoog, J.L, Brown, A.
登録日2022-04-08
公開日2022-10-05
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献SPACA9 is a lumenal protein of human ciliary singlet and doublet microtubules.
Proc.Natl.Acad.Sci.USA, 119, 2022
4KIC
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BU of 4kic by Molmil
Crystal structure of methyltransferase from Streptomyces hygroscopicus complexed with S-adenosyl-L-methionine and phenylpyruvic acid
分子名称: (2R)-2-hydroxy-3-phenylpropanoic acid, 3-PHENYLPYRUVIC ACID, CALCIUM ION, ...
著者Liu, Y.C, Zou, X.W, Chan, H.C, Huang, C.J, Li, T.L.
登録日2013-05-02
公開日2014-05-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structure and mechanism of a nonhaem-iron SAM-dependent C-methyltransferase and its engineering to a hydratase and an O-methyltransferase
Acta Crystallogr.,Sect.D, 70, 2014
6UTA
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BU of 6uta by Molmil
Crystal structure of Z004 iGL Fab in complex with ZIKV EDIII
分子名称: Env, Z004 iGL Fab heavy chain, Z004 iGL Fab light chain
著者Esswein, S.R, Gristick, H.B, Keeffe, J.R, Bjorkman, P.J.
登録日2019-10-29
公開日2020-04-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for Zika envelope domain III recognition by a germline version of a recurrent neutralizing antibody.
Proc.Natl.Acad.Sci.USA, 117, 2020
7TZB
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BU of 7tzb by Molmil
Crystal structure of the human mitochondrial seryl-tRNA synthetase (mt SerRS) bound with a seryl-adenylate analogue
分子名称: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, Serine--tRNA ligase, mitochondrial
著者Kuhle, B, Hirschi, M, Doerfel, L, Lander, G, Schimmel, P.
登録日2022-02-15
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural basis for shape-selective recognition and aminoacylation of a D-armless human mitochondrial tRNA.
Nat Commun, 13, 2022
7U2B
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BU of 7u2b by Molmil
Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA(GCU-TL)
分子名称: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, RNA (53-MER), Serine--tRNA ligase, ...
著者Hirschi, M, Kuhle, B, Doerfel, L, Schimmel, P, Lander, G.
登録日2022-02-23
公開日2022-09-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis for shape-selective recognition and aminoacylation of a D-armless human mitochondrial tRNA.
Nat Commun, 13, 2022
6UWT
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BU of 6uwt by Molmil
Clostridium difficile binary toxin translocase CDTb tetradecamer in symmetric conformation
分子名称: ADP-ribosyltransferase binding component, CALCIUM ION
著者Xu, X, Pozharski, E, des Georges, A.
登録日2019-11-05
公開日2020-01-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly.
Proc.Natl.Acad.Sci.USA, 117, 2020
6V8V
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BU of 6v8v by Molmil
Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase in complex with ceftazidime-2
分子名称: ACYLATED CEFTAZIDIME, Beta-lactamase
著者Brown, C.A, Hu, L, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2019-12-12
公開日2020-04-22
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance.
J.Biol.Chem., 295, 2020
6DKS
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BU of 6dks by Molmil
Structure of the Rbpj-SHARP-DNA Repressor Complex
分子名称: DNA (5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3'), DNA (5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3'), Maltose/maltodextrin-binding periplasmic protein, ...
著者Kovall, R.A, VanderWielen, B.D, Yuan, Z.
登録日2018-05-30
公開日2019-01-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structural and Functional Studies of the RBPJ-SHARP Complex Reveal a Conserved Corepressor Binding Site.
Cell Rep, 26, 2019
7U2A
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BU of 7u2a by Molmil
Cryo-electron microscopy structure of human mt-SerRS in complex with mt-tRNA (GCU)
分子名称: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, RNA (38-MER), Serine--tRNA ligase, ...
著者Hirschi, M, Kuhle, B, Doerfel, L, Schimmel, P, Lander, G.
登録日2022-02-23
公開日2022-09-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis for shape-selective recognition and aminoacylation of a D-armless human mitochondrial tRNA.
Nat Commun, 13, 2022
5B7E
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BU of 5b7e by Molmil
Structure of perdeuterated CueO
分子名称: Blue copper oxidase CueO, COPPER (II) ION, CU-O-CU LINKAGE, ...
著者Akter, M, Higuchi, Y, Shibata, N.
登録日2016-06-07
公開日2016-10-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Biochemical, spectroscopic and X-ray structural analysis of deuterated multicopper oxidase CueO prepared from a new expression construct for neutron crystallography
Acta Crystallogr.,Sect.F, 72, 2016
5B8A
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BU of 5b8a by Molmil
Crystal structure of oxidized chimeric EcAhpC1-186-YFSKHN
分子名称: Alkyl hydroperoxide reductase subunit C,Peroxiredoxin-2, GLYCEROL, SULFATE ION
著者Kamariah, N, Sek, M.F, Eisenhaber, B, Eisenhaber, F, Gruber, G.
登録日2016-06-14
公開日2017-02-01
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Transition steps in peroxide reduction and a molecular switch for peroxide robustness of prokaryotic peroxiredoxins.
Sci Rep, 6, 2016
6DR2
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BU of 6dr2 by Molmil
Ca2+-bound human type 3 1,4,5-inositol trisphosphate receptor
分子名称: CALCIUM ION, Inositol 1,4,5-trisphosphate receptor type 3, ZINC ION
著者Hite, R.K, Paknejad, N.
登録日2018-06-11
公開日2018-07-18
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (4.33 Å)
主引用文献Structural basis for the regulation of inositol trisphosphate receptors by Ca2+and IP3.
Nat. Struct. Mol. Biol., 25, 2018
6V0Y
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BU of 6v0y by Molmil
immune receptor complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fibrinogen beta 72,74cit69-81, GLYCEROL, ...
著者Lim, J.J, Rossjohn, J.
登録日2019-11-19
公開日2020-11-25
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The shared susceptibility epitope of HLA-DR4 binds citrullinated self-antigens and the TCR.
Sci Immunol, 6, 2021

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件を2025-07-09に公開中

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