PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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7KFQ	Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to 1H-Indole-3-Carboxylic Acid 分子名称: 1H-INDOLE-3-CARBOXYLIC ACID, SULFATE ION, Transcriptional regulator, ... 著者 Walton, W.G, Redinbo, M.R, Dangl, J.L. 登録日 2020-10-14 公開日 2021-11-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome. Nat Microbiol, 7, 2022
7QAQ	Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, E174A mutant 分子名称: Cyclodipeptide synthase 著者 Sutherland, E, Harding, C.J, Czekster, C.M. 登録日 2021-11-17 公開日 2022-09-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Active site remodelling of a cyclodipeptide synthase redefines substrate scope. Commun Chem, 5, 2022
7QB8	Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, WT form 分子名称: Cyclodipeptide synthase 著者 Sutherland, E, Harding, C.J, Czekster, C.M. 登録日 2021-11-18 公開日 2022-09-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Active site remodelling of a cyclodipeptide synthase redefines substrate scope. Commun Chem, 5, 2022
4F9V	Structure of C113A/C136A mutant variant of glycosylated glutaminyl cyclase from Drosophila melanogaster 分子名称: 1-(3,4-dimethoxyphenyl)-3-[3-(1H-imidazol-1-yl)propyl]thiourea, CG32412, DI(HYDROXYETHYL)ETHER, ... 著者 Kolenko, P, Koch, B, Ruiz-Carilo, D, Stubbs, M.T. 登録日 2012-05-21 公開日 2012-08-29 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structures of Glutaminyl Cyclases (QCs) from Drosophila melanogaster Reveal Active Site Conservation between Insect and Mammalian QCs. Biochemistry, 51, 2012
8VAM	Structure of the E. coli clamp loader bound to the beta clamp in a Semi-Open conformation 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... 著者 Landeck, J.T, Kelch, B.A. 登録日 2023-12-11 公開日 2024-03-27 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
3DCQ	LECB (PA-LII) in complex with the synthetic ligand 2G0 分子名称: (2S)-1-[(2S)-6-amino-2-({[(2S,3S,4R,5S,6S)-3,4,5-trihydroxy-6-methyltetrahydro-2H-pyran-2-yl]acetyl}amino)hexanoyl]-N-[(1S)-1-carbamoyl-3-methylbutyl]pyrrolidine-2-carboxamide, CALCIUM ION, Fucose-binding lectin PA-IIL 著者 Johansson, E.M, Crusz, S.A, Kolomiets, E, Buts, L, Kadam, R.U, Cacciarini, M, Bartels, K.M, Diggle, S.P, Camara, M, Williams, P, Loris, R, Nativi, C, Rosenau, F, Jaeger, K.E, Darbre, T, Reymond, J.L. 登録日 2008-06-04 公開日 2009-01-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Inhibition and dispersion of Pseudomonas aeruginosa biofilms by glycopeptide dendrimers targeting the fucose-specific lectin LecB. Chem.Biol., 15, 2008
2Y95	Solution structure of AUCG tetraloop hairpin found in human Xist RNA A-repeats essential for X-inactivation 分子名称: 5'-R(*GP*GP*CP*GP*CP*AP*UP*CP*GP*GP*CP*GP*CP*C)-3' 著者 Duszczyk, M.M, Sattler, M. 登録日 2011-02-11 公開日 2011-10-26 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 The Xist RNA A-Repeat Comprises a Novel Aucg Tetraloop Fold and a Platform for Multimerization. RNA, 17, 2011
5FZB	Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment 4-Pyridylthiourea (N06275b) (ligand modelled based on PANDDA event map, SGC - Diamond I04-1 fragment screening) 分子名称: 1,2-ETHANEDIOL, 1-pyridin-4-ylthiourea, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Nowak, R, Krojer, T, Johansson, C, Kupinska, K, Szykowska, A, Pearce, N, Talon, R, Collins, P, Gileadi, C, Strain-Damerell, C, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, von Delft, F, Brennan, P.E, Oppermann, U. 登録日 2016-03-12 公開日 2016-03-30 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Maybridge Fragment 4-Pyridylthiourea (N06275B) (Ligand Modelled Based on Pandda Event Map, Sgc -Diamond I04-1 Fragment Screening) To be Published
2Y9T	Structural basis of p63a SAM domain mutants involved in AEC syndrome 分子名称: TUMOR PROTEIN 63 著者 Sathyamurthy, A, Freund, S.M.V, Johnson, C.M, Allen, M.D. 登録日 2011-02-16 公開日 2011-08-03 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Structural Basis of P63Alpha Sam Domain Mutants Involved in Aec Syndrome. FEBS J., 278, 2011
5CNT	Crystal structure of the dATP inhibited E. coli class Ia ribonucleotide reductase complex bound to UDP and dATP at 3.25 Angstroms resolution 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, MU-OXO-DIIRON, ... 著者 Chen, P.Y.-T, Zimanyi, C.M, Funk, M.A, Drennan, C.L. 登録日 2015-07-18 公開日 2016-01-20 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Molecular basis for allosteric specificity regulation in class Ia ribonucleotide reductase from Escherichia coli. Elife, 5, 2016
8V6L	Open-state cryo-EM structure of human TRPV3 in presence of tetrahydrocannabivarin (THCV) in cNW30 nanodiscs 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, SODIUM ION, Tetrahydrocannabivarin, ... 著者 Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I. 登録日 2023-12-01 公開日 2024-04-17 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.68 Å) 主引用文献 TRPV3 activation by different agonists accompanied by lipid dissociation from the vanilloid site. Sci Adv, 10, 2024
4N6B	Soybean Serine Acetyltransferase Complexed with CoA 分子名称: COENZYME A, Serine Acetyltransferase Apoenzyme 著者 Yi, H, Dey, S, Kumaran, S, Krishnan, H.B, Jez, J.M. 登録日 2013-10-11 公開日 2013-11-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.005 Å) 主引用文献 Structure of soybean serine acetyltransferase and formation of the cysteine regulatory complex as a molecular chaperone. J.Biol.Chem., 288, 2013
2EDI	Solution structure of the UQ_con domain from human NEDD8-conjugating enzyme NCE2 分子名称: NEDD8-conjugating enzyme UBE2F 著者 Endo, H, Izumi, K, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-02-14 公開日 2007-08-14 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the UQ_con domain from human NEDD8-conjugating enzyme NCE2 To be Published
4FB0	Structure of Oceanobacillus iheyensis group II intron C377G mutant in a ligand-free state in the presence of K+ and Mg2+ 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Group IIC intron, MAGNESIUM ION, ... 著者 Marcia, M, Pyle, A.M. 登録日 2012-05-22 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.22 Å) 主引用文献 Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
8V6M	Inactivated-state cryo-EM structure of human TRPV3 in presence of tetrahydrocannabivarin (THCV) in cNW30 nanodiscs 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, SODIUM ION, Tetrahydrocannabivarin, ... 著者 Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I. 登録日 2023-12-01 公開日 2024-04-17 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.63 Å) 主引用文献 TRPV3 activation by different agonists accompanied by lipid dissociation from the vanilloid site. Sci Adv, 10, 2024
2YDG	Ascorbate co-crystallized HEWL. 分子名称: ASCORBIC ACID, Lysozyme C, SODIUM ION 著者 De la Mora, E, Carmichael, I, Garman, E.F. 登録日 2011-03-19 公開日 2011-07-20 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Effective Scavenging at Cryotemperatures: Further Increasing the Dose Tolerance of Protein Crystals. J.Synchrotron.Radiat., 18, 2011
2YOE	X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) in complex with GABA and flurazepam 分子名称: CYS-LOOP LIGAND-GATED ION CHANNEL, Flurazepam, GAMMA-AMINO-BUTANOIC ACID 著者 Spurny, R, Brams, M, Nury, H, Legrand, P, Ulens, C. 登録日 2012-10-23 公開日 2012-10-31 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Pentameric Ligand-Gated Ion Channel Elic is Activated by Gaba and Modulated by Benzodiazepines. Proc.Natl.Acad.Sci.USA, 109, 2012
5FK2	SAM-I riboswitch bearing the H. marismortui Kt-7 variant 3bn is GG 分子名称: BARIUM ION, S-ADENOSYLMETHIONINE, SAM-I RIBOSWITCH 著者 Huang, L, Lilley, D.M.J. 登録日 2015-10-14 公開日 2016-05-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016
7QNK	Structure of beta-lactamase TEM-171 complexed with tazobactam intermediate at 2.5 A resolution 分子名称: ACETATE ION, Beta-lactamase TEM, TAZOBACTAM INTERMEDIATE 著者 Hakanpaa, J, Petrova, T, Samygina, V.R, Lamzin, V.S, Egorov, A.M. 登録日 2021-12-21 公開日 2022-07-13 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of the molecular class A beta-lactamase TEM-171 and its complexes with tazobactam. Acta Crystallogr D Struct Biol, 78, 2022
2EEP	Prolyl Tripeptidyl Aminopeptidase Complexed with an Inhibitor 分子名称: Dipeptidyl aminopeptidase IV, putative, SULFATE ION, ... 著者 Xu, Y, Nakajima, Y, Ito, K, Yoshimoto, T. 登録日 2007-02-16 公開日 2008-02-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism J.Mol.Biol., 375, 2008
3DEE	CRYSTAL STRUCTURE OF A PUTATIVE REGULATORY PROTEIN INVOLVED IN TRANSCRIPTION (NGO1945) FROM NEISSERIA GONORRHOEAE FA 1090 AT 2.25 A RESOLUTION 分子名称: CHLORIDE ION, IMIDAZOLE, Putative regulatory protein 著者 Joint Center for Structural Genomics (JCSG) 登録日 2008-06-09 公開日 2008-08-05 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structure of the first representative of Pfam family PF09836 reveals a two-domain organization and suggests involvement in transcriptional regulation. Acta Crystallogr.,Sect.F, 66, 2010
8V9I	1-deoxy-D-xylulose 5-phosphate synthase (DXPS) from Deinococcus radiodurans with D-phenylalanine-derived triazole acetylphosphonate (D-PheTrAP) bound 分子名称: 1-deoxy-D-xylulose-5-phosphate synthase, 2-HYDROXY BUTANE-1,4-DIOL, 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(1S)-1-[(S)-(2-{1-[(1R)-1-carboxy-2-phenylethyl]-1H-1,2,3-triazol-4-yl}ethoxy)(hydroxy)phosphoryl]-1-hydroxyethyl}-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, ... 著者 Chen, P.Y.-T, Drennan, C.L. 登録日 2023-12-08 公開日 2024-04-24 実験手法 X-RAY DIFFRACTION (1.981 Å) 主引用文献 Potent Inhibition of E. coli DXP Synthase by a gem -Diaryl Bisubstrate Analog. Acs Infect Dis., 10, 2024
5FLE	High resolution NI,FE-CODH-320 mV with CN state 分子名称: CARBON MONOXIDE DEHYDROGENASE 2, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ... 著者 Ciaccafava, A, Tombolelli, D, Domnik, L, Fesseler, J, Jeoung, J.-H, Dobbek, H, Mroginski, M.A, Hildebrandt, P, Zebger, I. 登録日 2015-10-26 公開日 2016-09-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.23 Å) 主引用文献 When the inhibitor tells more than the substrate: the cyanide-bound state of a carbon monoxide dehydrogenase. Chem Sci, 7, 2016
7QAY	Crystal structure of a cyclodipeptide synthase from Parcubacteria bacterium RAAC4_OD1_1, Y55F mutant 分子名称: Cyclodipeptide synthase 著者 Sutherland, E, Harding, C.J, Czekster, C.M. 登録日 2021-11-17 公開日 2022-09-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.093 Å) 主引用文献 Active site remodelling of a cyclodipeptide synthase redefines substrate scope. Commun Chem, 5, 2022
2Y8E	Crystal structure of D. melanogaster Rab6 GTPase bound to GMPPNP 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RAB-PROTEIN 6, ... 著者 Walden, M, Edwards, T.A. 登録日 2011-02-04 公開日 2011-07-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Structure of the Drosophila Melanogaster Rab6 Gtpase at 1.4 A Resolution Acta Crystallogr.,Sect.F, 67, 2011

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