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1KC7
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Pyruvate Phosphate Dikinase with Bound Mg-phosphonopyruvate
分子名称: MAGNESIUM ION, PHOSPHONOPYRUVATE, SULFATE ION, ...
著者Chen, C.C, Howard, A, Herzberg, O.
登録日2001-11-07
公開日2002-01-30
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis
Biochemistry, 41, 2002
3HYF
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BU of 3hyf by Molmil
Crystal structure of HIV-1 RNase H p15 with engineered E. coli loop and active site inhibitor
分子名称: 2-(3,4-dichlorobenzyl)-5,6-dihydroxypyrimidine-4-carboxylic acid, ACETATE ION, GLYCEROL, ...
著者Lansdon, E.B, Kirschberg, T.A.
登録日2009-06-22
公開日2009-10-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献RNase H active site inhibitors of human immunodeficiency virus type 1 reverse transcriptase: design, biochemical activity, and structural information.
J.Med.Chem., 52, 2009
7BOO
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BU of 7boo by Molmil
Crystal Structure of Core-mannan synthase A (CmsA/Ktr4) from Aspergillus fumigatus, apo form
分子名称: Alpha-1,2-mannosyltransferase (Ktr4), putative, GLYCEROL, ...
著者Hira, D, Onoue, T, Oka, T.
登録日2020-03-19
公開日2020-09-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for the core-mannan biosynthesis of cell wall fungal-type galactomannan in Aspergillus fumigatus .
J.Biol.Chem., 295, 2020
2HBA
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Crystal Structure of N-terminal Domain of Ribosomal Protein L9 (NTL9) K12M
分子名称: 50S ribosomal protein L9, CHLORIDE ION, IMIDAZOLE, ...
著者Cho, J.-H, Kim, E.Y, Schindelin, H, Raleigh, D.P.
登録日2006-06-14
公開日2007-05-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Energetically significant networks of coupled interactions within an unfolded protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
5J7A
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BU of 5j7a by Molmil
Bacteriorhodopsin ground state structure obtained with Serial Femtosecond Crystallography
分子名称: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, Bacteriorhodopsin, RETINAL
著者Nogly, P, Panneels, V, Nelson, G, Gati, C, Kimura, T, Milne, C, Milathianaki, D, Kubo, M, Wu, W, Conrad, C, Coe, J, Bean, R, Zhao, Y, Bath, P, Dods, R, Harimoorthy, R, Beyerlein, K.R, Rheinberger, J, James, D, DePonte, D, Li, C, Sala, L, Williams, G, Hunter, M, Koglin, J.E, Berntsen, P, Nango, E, Iwata, S, Chapman, H.N, Fromme, P, Frank, M, Abela, R, Boutet, S, Barty, A, White, T.A, Weierstall, U, Spence, J, Neutze, R, Schertler, G, Standfuss, J.
登録日2016-04-06
公開日2016-08-31
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Lipidic cubic phase injector is a viable crystal delivery system for time-resolved serial crystallography.
Nat Commun, 7, 2016
1PVH
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BU of 1pvh by Molmil
Crystal structure of leukemia inhibitory factor in complex with gp130
分子名称: IODIDE ION, Interleukin-6 receptor beta chain, Leukemia inhibitory factor
著者Boulanger, M.J, Bankovich, A.J, Kortemme, T, Baker, D, Garcia, K.C.
登録日2003-06-27
公開日2003-10-14
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Convergent mechanisms for recognition of divergent cytokines by the shared signaling receptor gp130.
Mol.Cell, 12, 2003
5IHJ
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BU of 5ihj by Molmil
Fusion of Maltose-binding Protein and PilA from Acinetobacter baumannii BIDMC57
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, GLYCEROL, ...
著者Piepenbrink, K.H, Sundberg, E.J.
登録日2016-02-29
公開日2016-09-21
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Diversity in the Type IV Pili of Multidrug-resistant Acinetobacter.
J.Biol.Chem., 291, 2016
5LSV
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BU of 5lsv by Molmil
X-ray crystal structure of AA13 LPMO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AoAA13, ZINC ION, ...
著者Frandsen, K.E.H, Poulsen, J.-C.N, Tovborg, M, Johansen, K.S, Lo Leggio, L.
登録日2016-09-05
公開日2017-01-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Learning from oligosaccharide soaks of crystals of an AA13 lytic polysaccharide monooxygenase: crystal packing, ligand binding and active-site disorder.
Acta Crystallogr D Struct Biol, 73, 2017
2AYP
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Crystal Structure of CHK1 with an Indol Inhibitor
分子名称: (3Z)-6-(4-HYDROXY-3-METHOXYPHENYL)-3-(1H-PYRROL-2-YLMETHYLENE)-1,3-DIHYDRO-2H-INDOL-2-ONE, Serine/threonine-protein kinase Chk1
著者Lin, N.-H, Xia, P, Kovar, P, Chen, Z, Zhang, H, Rosenberg, S.H, Sham, H.L.
登録日2005-09-07
公開日2006-09-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Synthesis and biological evaluation of 3-ethylidene-1,3-dihydro-indol-2-ones as novel checkpoint 1 inhibitors
Bioorg.Med.Chem.Lett., 16, 2006
6M7Z
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BU of 6m7z by Molmil
A divergent kinase lacking the glycine-rich loop regulates membrane ultrastructure of the Toxoplasma parasitophorous vacuole
分子名称: 1,2-ETHANEDIOL, Bradyzoite pseudokinase 1, CHLORIDE ION
著者Beraki, T, Borek, D.M, Reese, M.L.
登録日2018-08-21
公開日2018-10-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Divergent kinase regulates membrane ultrastructure of theToxoplasmaparasitophorous vacuole.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
3HFO
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BU of 3hfo by Molmil
Crystal Structure of an Hfq protein from Synechocystis sp.
分子名称: Ssr3341 protein
著者Boggild, A, Overgaard, M, Valentin-Hansen, P, Brodersen, D.E.
登録日2009-05-12
公開日2009-07-14
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Cyanobacteria contain a structural homologue of the Hfq protein with altered RNA-binding properties.
Febs J., 276, 2009
1DF4
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BU of 1df4 by Molmil
INTERACTIONS BETWEEN HIV-1 GP41 CORE AND DETERGENTS AND THEIR IMPLICATIONS FOR MEMBRANE FUSION
分子名称: HIV-1 ENVELOPE GLYCOPROTEIN GP41
著者Shu, W, Ji, H, Lu, M.
登録日1999-11-17
公開日1999-11-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Interactions between HIV-1 gp41 core and detergents and their implications for membrane fusion.
J.Biol.Chem., 275, 2000
2CHW
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BU of 2chw by Molmil
A pharmacological map of the PI3-K family defines a role for p110 alpha in signaling: The structure of complex of phosphoinositide 3- kinase gamma with inhibitor PIK-39
分子名称: 2-((9H-PURIN-6-YLTHIO)METHYL)-5-CHLORO-3-(2-METHOXYPHENYL)QUINAZOLIN-4(3H)-ONE, PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE 3-KINASE CATALYTIC SUBUNIT GAMMA ISOFORM
著者Knight, Z.A, Gonzalez, B, Feldman, M.E, Zunder, E.R, Goldenberg, D.D, Williams, O, Loewith, R, Stokoe, D, Balla, A, Toth, B, Balla, T, Weiss, W.A, Williams, R.L, Shokat, K.M.
登録日2006-03-16
公開日2006-05-22
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Pharmacological Map of the Pi3-K Family Defines a Role for P110Alpha in Signaling
Cell(Cambridge,Mass.), 125, 2006
2GKL
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BU of 2gkl by Molmil
Crystal structure of the zinc carbapenemase CPHA in complex with the inhibitor pyridine-2,4-dicarboxylate
分子名称: Beta-lactamase, GLYCEROL, PYRIDINE-2,4-DICARBOXYLIC ACID, ...
著者Garau, G, Dideberg, O.
登録日2006-04-03
公開日2007-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Competitive Inhibitors of the CphA Metallo-{beta}-Lactamase from Aeromonas hydrophila
Antimicrob.Agents Chemother., 51, 2007
6MT9
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BU of 6mt9 by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit with TTP, ATP, and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Thomas, W.C, Brooks, F.P, Bacik, J.P, Ando, N.
登録日2018-10-19
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
6MV9
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BU of 6mv9 by Molmil
X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit with TTP and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ribonucleoside-diphosphate reductase, ...
著者Thomas, W.C, Brooks, F.P, Bacik, J.P, Ando, N.
登録日2018-10-24
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019
2GDA
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BU of 2gda by Molmil
REFINED SOLUTION STRUCTURE OF THE GLUCOCORTICOID RECEPTOR DNA-BINDING DOMAIN
分子名称: GLUCOCORTICOID RECEPTOR, ZINC ION
著者Baumann, H, Paulsen, K, Kovacs, H, Berglund, H, Wright, A.P.H, Gustafsson, J.-A, Hard, T.
登録日1994-03-15
公開日1994-06-22
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Refined solution structure of the glucocorticoid receptor DNA-binding domain.
Biochemistry, 32, 1993
3BS0
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BU of 3bs0 by Molmil
Crystal structure of the P. putida toluene transporter TodX
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, TodX
著者Hearn, E.M, Patel, D.R, van den Berg, B.
登録日2007-12-21
公開日2008-06-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Outer-membrane transport of aromatic hydrocarbons as a first step in biodegradation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2HBB
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BU of 2hbb by Molmil
Crystal Structure of the N-terminal Domain of Ribosomal Protein L9 (NTL9)
分子名称: 50S ribosomal protein L9, ZINC ION
著者Cho, J.-H, Kim, E.Y, Schindelin, H, Raleigh, D.P.
登録日2006-06-14
公開日2007-05-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Energetically significant networks of coupled interactions within an unfolded protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
3C4O
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BU of 3c4o by Molmil
Crystal Structure of the SHV-1 Beta-lactamase/Beta-lactamase inhibitor protein (BLIP) E73M/S130K/S146M complex
分子名称: Beta-lactamase SHV-1, Beta-lactamase inhibitory protein, SULFATE ION
著者Reynolds, K.A, Hanes, M.S, Thomson, J.M, Antczak, A.J, Berger, J.M, Bonomo, R.A, Kirsch, J.F, Handel, T.M.
登録日2008-01-30
公開日2008-05-27
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Computational redesign of the SHV-1 beta-lactamase/beta-lactamase inhibitor protein interface.
J.Mol.Biol., 382, 2008
2JQ8
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BU of 2jq8 by Molmil
Solution structure of the Somatomedin B domain from vitronectin produced in Pichia pastoris
分子名称: Vitronectin
著者Gaardsvoll, H, Hirschberg, D, Nielbo, S, Mayasundari, A, Peterson, C.B, Jansson, A, Jorgensen, T.J.D, Poulsen, F.M.
登録日2007-05-30
公開日2007-09-11
最終更新日2023-12-20
実験手法SOLUTION NMR
主引用文献Solution structure of recombinant somatomedin B domain from vitronectin produced in Pichia pastoris
Protein Sci., 16, 2007
2F1T
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BU of 2f1t by Molmil
Outer membrane protein OmpW
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, GLYCEROL, LAURYL DIMETHYLAMINE-N-OXIDE, ...
著者van den Berg, B.
登録日2005-11-15
公開日2006-01-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The outer membrane protein OmpW forms an eight-stranded beta-barrel with a hydrophobic channel.
J.Biol.Chem., 281, 2006
8V6K
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Apo-state cryo-EM structure of human TRPV3 in cNW30 nanodiscs
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, SODIUM ION, Transient receptor potential cation channel subfamily V member 3
著者Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I.
登録日2023-12-01
公開日2024-04-17
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献TRPV3 activation by different agonists accompanied by lipid dissociation from the vanilloid site.
Sci Adv, 10, 2024
8V6N
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Open-state cryo-EM structure of human TRPV3 in presence of 2-APB in cNW30 nanodiscs
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-aminoethyl diphenylborinate, ARACHIDONIC ACID, ...
著者Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I.
登録日2023-12-01
公開日2024-04-17
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献TRPV3 activation by different agonists accompanied by lipid dissociation from the vanilloid site.
Sci Adv, 10, 2024
6MVE
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Reduced X-ray crystal structure of Bacillus subtilis ribonucleotide reductase NrdE alpha subunit with TTP, ATP, and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Thomas, W.C, Brooks, F.P, Bacik, J.P, Ando, N.
登録日2018-10-25
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Convergent allostery in ribonucleotide reductase.
Nat Commun, 10, 2019

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