PDB: 225399 件ウェブページステータス検索Chemie searchBIRD

---

3SS2	Neutron structure of perdeuterated rubredoxin using 48 hours 3rd pass data 分子名称: FE (III) ION, Rubredoxin 著者 Munshi, P, Chung, C.-L, Blakeley, M.P, Weiss, K.L, Myles, D.A.A, Meilleur, F. 登録日 2011-07-07 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 NEUTRON DIFFRACTION (1.75 Å) 主引用文献 Rapid visualization of hydrogen positions in protein neutron crystallographic structures. Acta Crystallogr.,Sect.D, 68, 2012
1XJX	The crystal structures of the DNA binding sites of the RUNX1 transcription factor 分子名称: 5'-D(*TP*CP*TP*GP*CP*GP*GP*TP*C)-3', 5'-D(*TP*GP*AP*CP*CP*GP*CP*AP*G)-3' 著者 Kitayner, M, Rozenberg, H, Rabinovich, D, Shakked, Z. 登録日 2004-09-26 公開日 2005-03-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structures of the DNA-binding site of Runt-domain transcription regulators. Acta Crystallogr.,Sect.D, 61, 2005
3TAO	Structure of Mycobacterium tuberculosis triosephosphate isomerase bound to phosphoglycolohydroxamate 分子名称: PHOSPHOGLYCOLOHYDROXAMIC ACID, Triosephosphate isomerase 著者 Connor, S.E, Capodagli, G.C, Deaton, M.K, Pegan, S.D. 登録日 2011-08-04 公開日 2011-11-30 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Structural and functional characterization of Mycobacterium tuberculosis triosephosphate isomerase. Acta Crystallogr.,Sect.D, 67, 2011
2PS1	S. cerevisiae orotate phosphoribosyltransferase complexed with orotic acid and PRPP 分子名称: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, MAGNESIUM ION, OROTIC ACID, ... 著者 Gonzalez-Segura, L, Hurley, T.D, McClard, R.W. 登録日 2007-05-04 公開日 2008-01-15 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Ternary complex formation and induced asymmetry in orotate phosphoribosyltransferase. Biochemistry, 46, 2007
2Q71	Uroporphyrinogen Decarboxylase G168R single mutant enzyme in complex with coproporphyrinogen-III 分子名称: COPROPORPHYRINOGEN III, Uroporphyrinogen decarboxylase 著者 Phillips, J.D, Whitby, F.G, Stadtmueller, B.M, Edwards, C.Q, Hill, C.P, Kushner, J.P. 登録日 2007-06-05 公開日 2007-06-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Two Novel Uropophyrinogen Decarboxylase (URO-D) Mutations Causing Hepatoerythropoietic Porphyria (HEP) Transl.Res., 149, 2007
3FVE	Crystal structure of diaminopimelate epimerase Mycobacterium tuberculosis DapF 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Diaminopimelate epimerase, GLYCEROL 著者 Usha, V, Dover, L.G, Roper, D.I, Futterer, K, Besra, G.S. 登録日 2009-01-15 公開日 2009-01-27 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of the diaminopimelate epimerase DapF from Mycobacterium tuberculosis Acta Crystallogr.,Sect.D, 65, 2009
3AUQ	Crystal structure of the human vitamin D receptor ligand binding domain complexed with Yne-diene type analog of active 14-epi-2alpha-methyl-19-norvitamin D3 分子名称: (1R,2S,3R)-5-[2-[(1R,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-7a-methyl-1,2,3,3a,6,7-hexahydroinden-4-yl]ethynyl]-2-methyl-cyclohex-4-ene-1,3-diol, Vitamin D3 receptor 著者 Kakuda, S, Takimoto-Kamimura, M. 登録日 2011-02-15 公開日 2011-09-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Development of 14-epi-19-nortachysterol and its unprecedented binding configuration for the human vitamin D receptor J.Am.Chem.Soc., 133, 2011
3AUR	Crystal structure of the human vitamin D receptor ligand binding domain complexed with Yne-diene type analog of active 14-epi-2beta-methyl-19-norvitamin D3 分子名称: (1R,2S,3R)-5-[2-[(1R,3aS,7aR)-1-[(2R)-6-hydroxy-6-methyl-heptan-2-yl]-7a-methyl-1,2,3,3a,6,7-hexahydroinden-4-yl]ethynyl]-2-methyl-cyclohex-4-ene-1,3-diol, Vitamin D3 receptor 著者 Kakuda, S, Takimoto-Kamimura, M. 登録日 2011-02-15 公開日 2011-09-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Development of 14-epi-19-nortachysterol and its unprecedented binding configuration for the human vitamin D receptor J.Am.Chem.Soc., 133, 2011
2CNB	Trypanosoma brucei UDP-galactose-4-epimerase in ternary complex with NAD and the substrate analogue UDP-4-deoxy-4-fluoro-alpha-D-galactose 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-GALACTOSE-4-EPIMERASE, URIDINE-5'-DIPHOSPHATE-4-DEOXY-4-FLUORO-ALPHA-D-GALACTOSE 著者 Alphey, M.S, Ferguson, M.A.J, Hunter, W.N. 登録日 2006-05-18 公開日 2006-06-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Trypanosoma Brucei Udp-Galactose-4-Epimerase in Ternary Complex with Nad+ and the Substrate Analogue Udp-4-Deoxy-4-Fluoro-Alpha-D-Galactose Acta Crystallogr.,Sect.F, 62, 2006
3RYG	128 hours neutron structure of perdeuterated rubredoxin 分子名称: FE (III) ION, Rubredoxin 著者 Munshi, P, Chung, C.-L, Weiss, K.L, Blakeley, M.P, Myles, D.A.A, Meilleur, F. 登録日 2011-05-11 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 NEUTRON DIFFRACTION (1.75 Å) 主引用文献 Rapid visualization of hydrogen positions in protein neutron crystallographic structures. Acta Crystallogr.,Sect.D, 68, 2012
2CIQ	Structure-based functional annotation: Yeast ymr099c codes for a D- hexose-6-phosphate mutarotase. 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, HEXOSE-6-PHOSPHATE MUTAROTASE, ... 著者 Graille, M, Baltaze, J.-P, Leulliot, N, Liger, D, Quevillon-Cheruel, S, van Tilbeurgh, H. 登録日 2006-03-24 公開日 2006-07-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure-based functional annotation: yeast ymr099c codes for a D-hexose-6-phosphate mutarotase. J. Biol. Chem., 281, 2006
2Q5R	Structure of apo Staphylococcus aureus D-tagatose-6-phosphate kinase 分子名称: Tagatose-6-phosphate kinase 著者 McGrath, T.E, Soloveychik, M, Romanov, V, Thambipillai, D, Dharamsi, A, Virag, C, Domagala, M, Pai, E.F, Edwards, A.M, Battaile, K, Chirgadze, N.Y. 登録日 2007-06-01 公開日 2007-06-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of apo Staphylococcus aureus D-tagatose-6-phosphate kinase TO BE PUBLISHED
1VS0	Crystal Structure of the Ligase Domain from M. tuberculosis LigD at 2.4A 分子名称: CHLORIDE ION, MAGNESIUM ION, Putative DNA ligase-like protein Rv0938/MT0965, ... 著者 Akey, D, Martins, A, Aniukwu, J, Glickman, M.S, Shuman, S, Berger, J.M, TB Structural Genomics Consortium (TBSGC) 登録日 2006-01-27 公開日 2006-02-28 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure and Nonhomologous End-joining Function of the Ligase Component of Mycobacterium DNA Ligase D. J.Biol.Chem., 281, 2006
2I5Y	Crystal structure of CD4M47, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 GP120 envelope glycoprotein and anti-HIV-1 antibody 17B 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody 17B Heavy chain, Antibody 17B Light chain, ... 著者 Huang, C.-C, Kwong, P.D. 登録日 2006-08-26 公開日 2006-10-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Combinatorial optimization of a CD4-mimetic miniprotein and cocrystal structures with HIV-1 gp120 envelope glycoprotein. J.Mol.Biol., 382, 2008
4F3S	Crystal structure of periplasmic D-alanine ABC transporter from Salmonella enterica 分子名称: D-ALANINE, GLYCINE, PHOSPHATE ION, ... 著者 Agarwal, R, Chamala, S, Evans, B, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Siedel, R, Villigas, G, Zencheck, W, Foti, R, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC) 登録日 2012-05-09 公開日 2012-05-23 最終更新日 2017-11-15 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Crystal structure of periplasmic D-alanine ABC transporter from Salmonella enterica To be Published
2I60	Crystal structure of [Phe23]M47, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 GP120 envelope glycoprotein and anti-HIV-1 antibody 17B 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B HEAVY CHAIN, ANTIBODY 17B LIGHT CHAIN, ... 著者 Huang, C.-C, Kwong, P.D. 登録日 2006-08-26 公開日 2006-10-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Combinatorial optimization of a CD4-mimetic miniprotein and cocrystal structures with HIV-1 gp120 envelope glycoprotein. J.Mol.Biol., 382, 2008
2EVS	Crystal structure of human Glycolipid Transfer Protein complexed with n-hexyl-beta-D-glucoside 分子名称: DECANE, Glycolipid transfer protein, HEXANE, ... 著者 Malinina, L, Malakhova, M.L, Kanack, A.T, Abagyan, R, Brown, R.E, Patel, D.J. 登録日 2005-10-31 公開日 2006-11-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure. Plos Biol., 4, 2006
2Q6Z	Uroporphyrinogen Decarboxylase G168R single mutant apo-enzyme 分子名称: Uroporphyrinogen decarboxylase 著者 Phillips, J.D, Whitby, F.G, Stadtmueller, B.M, Edwards, C.Q, Hill, C.P, Kushner, J.P. 登録日 2007-06-05 公開日 2007-06-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Two novel uroporphyrinogen decarboxylase (URO-D) mutations causing hepatoerythropoietic porphyria (HEP). Transl.Res., 149, 2007
3S2V	Crystal Structure of the Ligand Binding Domain of GluK1 in Complex with an Antagonist (S)-1-(2'-Amino-2'-carboxyethyl)-3-[(2-carboxythien-3-yl)methyl]thieno[3,4-d]pyrimidin-2,4-dione at 2.5 A Resolution 分子名称: (S)-1-(2'-AMINO-2'-CARBOXYETHYL)-3-[(2-CARBOXYTHIEN-3-YL)METHYL]THIENO[3,4-D]PYRIMIDIN-2,4-DIONE, CHLORIDE ION, GLYCEROL, ... 著者 Venskutonyte, R, Frydenvang, K, Kastrup, J.S. 登録日 2011-05-17 公開日 2011-06-22 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Selective kainate receptor (GluK1) ligands structurally based upon 1H-cyclopentapyrimidin-2,4(1H,3H)-dione: synthesis, molecular modeling, and pharmacological and biostructural characterization. J.Med.Chem., 54, 2011
2O4F	Structure of a parallel-stranded guanine tetraplex crystallised with monovalent ions 分子名称: 5'-D(*TP*GP*GP*GP*GP*T)-3', LITHIUM ION, SODIUM ION 著者 Creze, C, Rinaldi, B, Haser, R, Bouvet, P, Gouet, P. 登録日 2006-12-04 公開日 2007-05-22 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of a d(TGGGGT) quadruplex crystallized in the presence of Li+ ions. Acta Crystallogr.,Sect.D, 63, 2007
2FEQ	orally active thrombin inhibitors 分子名称: Decapeptide Hirudin Analogue, N-(CARBOXYMETHYL)-3-CYCLOHEXYL-D-ALANYL-N-({4-[(E)-AMINO(IMINO)METHYL]-1,3-THIAZOL-2-YL}METHYL)-L-PROLINAMIDE, Thrombin heavy chain, ... 著者 Mack, H, Baucke, D, Hornberger, W, Lange, U.E.W, Hoeffken, H.W. 登録日 2005-12-16 公開日 2006-08-08 最終更新日 2018-04-04 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Orally active thrombin inhibitors. Part 1: optimization of the P1-moiety Bioorg.Med.Chem.Lett., 16, 2006
1DFG	X-RAY STRUCTURE OF ESCHERICHIA COLI ENOYL REDUCTASE WITH BOUND NAD AND BENZO-DIAZABORINE 分子名称: 2-(TOLUENE-4-SULFONYL)-2H-BENZO[D][1,2,3]DIAZABORININ-1-OL, ENOYL ACYL CARRIER PROTEIN REDUCTASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Baldock, C, Rafferty, J.B, Rice, D.W. 登録日 1997-01-16 公開日 1998-01-28 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A mechanism of drug action revealed by structural studies of enoyl reductase. Science, 274, 1996
1U64	The Solution Structure of d(G3T4G4)2 分子名称: 5'-D(*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3' 著者 Sket, P, Crnugelj, M, Plavec, J. 登録日 2004-07-29 公開日 2004-10-26 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 d(G3T4G4) forms unusual dimeric G-quadruplex structure with the same general fold in the presence of K+, Na+ or NH4+ ions. Bioorg.Med.Chem., 12, 2004
3RZ6	Neutron structure of perdeuterated rubredoxin using 40 hours 1st pass data 分子名称: FE (III) ION, Rubredoxin 著者 Munshi, P, Chung, C.-L, Weiss, K.L, Blakeley, M.P, Myles, D.A.A, Meilleur, F. 登録日 2011-05-11 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 NEUTRON DIFFRACTION (1.75 Å) 主引用文献 Rapid visualization of hydrogen positions in protein neutron crystallographic structures. Acta Crystallogr.,Sect.D, 68, 2012
1S23	Crystal Structure Analysis of the B-DNA Decamer CGCAATTGCG 分子名称: 5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3', COBALT (II) ION 著者 Valls, N, Wright, G, Steiner, R.A, Murshudov, G.N, Subirana, J.A. 登録日 2004-01-08 公開日 2004-04-06 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 DNA variability in five crystal structures of d(CGCAATTGCG). Acta Crystallogr.,Sect.D, 60, 2004

<100101102103104105106107108109110111112113114115>