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5YTE
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BU of 5yte by Molmil
Large fragment of DNA Polymerase I from Thermus aquaticus in a closed ternary complex with with natural dT:dATP base pair
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*AP*TP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ...
著者Zeng, H, Mondal, M, Song, R.Y, Zhang, J, Xia, B, Gao, Y.Q, Yi, C.Q.
登録日2017-11-17
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Unnatural Cytosine Bases Recognized as Thymines by DNA Polymerases by the Formation of the Watson-Crick Geometry.
Angew. Chem. Int. Ed. Engl., 58, 2019
6XC0
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BU of 6xc0 by Molmil
Crystal structure of bacteriophage T4 spackle and lysozyme in monoclinic form
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Shi, K, Oakland, J.T, Kurniawan, F, Moeller, N.H, Aihara, H.
登録日2020-06-07
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structural basis of superinfection exclusion by bacteriophage T4 Spackle.
Commun Biol, 3, 2020
6LQX
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BU of 6lqx by Molmil
Crystal structure of the CBP bromodomain in complex with small molecule LC-CPin7
分子名称: (1~{S},6~{R})-6-[(1-methoxycarbonyl-3,4-dihydro-2~{H}-quinolin-6-yl)carbamoyl]cyclohex-3-ene-1-carboxylic acid, CREB-binding protein, SODIUM ION
著者Chen, Y, Zhang, F, Sun, Z, Bi, X, Luo, C.
登録日2020-01-14
公開日2021-01-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Design, synthesis and biological evaluation of novel small molecule inhibitor of the CBP bromodomain with possible anti-leukemia effects
To Be Published
6XJK
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BU of 6xjk by Molmil
JAK2 JH2 in complex with JAK067
分子名称: 4-({4-amino-6-[(1H-indol-5-yl)oxy]-1,3,5-triazin-2-yl}amino)benzene-1-sulfonamide, Tyrosine-protein kinase JAK2
著者Puleo, D.E, Krimmer, S.G, Newton, A.S, Schlessinger, J, Jorgensen, W.L.
登録日2020-06-24
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.023508 Å)
主引用文献Explicit Representation of Cation-pi Interactions in Force Fields with 1/r4 Nonbonded Terms.
J Chem Theory Comput, 16, 2020
6XKI
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BU of 6xki by Molmil
Crystal structure of eIF4A-I in complex with RNA bound to des-MePateA, a pateamine A analog
分子名称: (3S,6Z,8E,11S,15R)-15-amino-3-[(1E,3E,5E)-7-(dimethylamino)-2,5-dimethylhepta-1,3,5-trien-1-yl]-9,11-dimethyl-4,12-dioxa-20-thia-21-azabicyclo[16.2.1]henicosa-1(21),6,8,18-tetraene-5,13-dione, Eukaryotic initiation factor 4A-I, MAGNESIUM ION, ...
著者Liang, J, Naineni, S.K, Pelletier, J, Nagar, B.
登録日2020-06-26
公開日2021-01-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Functional mimicry revealed by the crystal structure of an eIF4A:RNA complex bound to the interfacial inhibitor, desmethyl pateamine A.
Cell Chem Biol, 28, 2021
6XHZ
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BU of 6xhz by Molmil
Alpha-lytic protease homolog N4
分子名称: N4: hypothetical protein, SULFATE ION
著者Nixon, C.F, Marqusee, S.M, Gee, C.L.
登録日2020-06-19
公開日2021-01-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Exploring the Evolutionary History of Kinetic Stability in the alpha-Lytic Protease Family.
Biochemistry, 60, 2021
6LTU
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BU of 6ltu by Molmil
Crystal structure of Cas12i2 ternary complex with double Mg2+ bound in catalytic pocket
分子名称: 1,2-ETHANEDIOL, Cas12i2, DNA (35-MER), ...
著者Huang, X, Sun, W, Cheng, Z, Chen, M, Li, X, Wang, J, Sheng, G, Gong, W, Wang, Y.
登録日2020-01-23
公開日2020-10-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structural basis for two metal-ion catalysis of DNA cleavage by Cas12i2.
Nat Commun, 11, 2020
6XV8
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BU of 6xv8 by Molmil
Crystal structure of Megabody Mb-Nb207-c7HopQ_G10
分子名称: Outer membrane protein
著者Steyaert, J, Uchanski, T, Fischer, B.
登録日2020-01-21
公開日2021-01-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Megabodies expand the nanobody toolkit for protein structure determination by single-particle cryo-EM.
Nat.Methods, 18, 2021
6XVW
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BU of 6xvw by Molmil
Catalytic domain of human PARP-1 in complex with the inhibitor MC2050
分子名称: 1,2-ETHANEDIOL, 2-[2-(4-pyridin-2-ylpiperazin-1-yl)ethylsulfanyl]-3~{H}-quinazolin-4-one, NICKEL (II) ION, ...
著者Pfahler, J, Steegborn, C.
登録日2020-01-22
公開日2020-06-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献From PARP1 to TNKS2 Inhibition: A Structure-Based Approach.
Acs Med.Chem.Lett., 11, 2020
6XWD
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BU of 6xwd by Molmil
14-3-3 sigma bound to canonical mono-phosphorylated aminopeptidase N (APN, CD13) binding motif
分子名称: 14-3-3 protein sigma, Amino peptidase N 38-46, CALCIUM ION, ...
著者Kiehstaller, S, Hennig, S.
登録日2020-01-23
公開日2020-11-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.60000193 Å)
主引用文献MMP activation-associated aminopeptidase N reveals a bivalent 14-3-3 binding motif.
J.Biol.Chem., 295, 2020
6LY6
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BU of 6ly6 by Molmil
PylRS C-terminus domain mutant bound with 3-(1-Naphthyl)-L-alanine and AMPNP
分子名称: MAGNESIUM ION, NAPHTHALEN-2-YL-3-ALANINE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2020-02-13
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5001328 Å)
主引用文献Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
6XSO
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BU of 6xso by Molmil
GH5-4 broad specificity endoglucanase from an uncultured bacterium
分子名称: (2S)-2-hydroxybutanedioic acid, Cellulase, DI(HYDROXYETHYL)ETHER, ...
著者Bingman, C.A, Smith, R.W, Glasgow, E.M, Fox, B.G.
登録日2020-07-15
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
6RLP
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BU of 6rlp by Molmil
Cryo-EM reconstruction of TMV coat protein
分子名称: Capsid protein, RNA (5'-R(P*GP*AP*A)-3')
著者Kandiah, E, Effantin, G.
登録日2019-05-02
公開日2022-11-23
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献CM01: a facility for cryo-electron microscopy at the European Synchrotron.
Acta Crystallogr D Struct Biol, 75, 2019
6LQM
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BU of 6lqm by Molmil
Cryo-EM structure of a pre-60S ribosomal subunit - state C
分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N.
登録日2020-01-14
公開日2020-08-26
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Nat Commun, 11, 2020
7MHC
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BU of 7mhc by Molmil
Structure of human STING in complex with MK-1454
分子名称: (2R,5R,7R,8S,10R,12aR,14R,15S,15aR,16R)-7-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-14-(6-amino-9H-purin-9-yl)-15,16-difluoro-2,10-bis(sulfanyl)octahydro-2H,10H,12H-5,8-methano-2lambda~5~,10lambda~5~-furo[3,2-l][1,3,6,9,11,2,10]pentaoxadiphosphacyclotetradecine-2,10-dione, Stimulator of interferon genes protein
著者Lesburg, C.A.
登録日2021-04-15
公開日2022-04-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献A kinase-cGAS cascade to synthesize a therapeutic STING activator.
Nature, 603, 2022
5YGU
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BU of 5ygu by Molmil
Crystal structure of Escherichia coli (strain K12) mRNA Decapping Complex RppH-DapF
分子名称: Diaminopimelate epimerase, IODIDE ION, L(+)-TARTARIC ACID, ...
著者Wang, Q, Guan, Z.Y, Zhang, D.L, Zou, T.T, Yin, P.
登録日2017-09-27
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.298 Å)
主引用文献DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli.
Nucleic Acids Res., 46, 2018
6LTS
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BU of 6lts by Molmil
Crystal structure of Thermus thermophilus transcription initiation complex comprising a truncated sigma finger
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Zhang, Y, Ebright, R.H.
登録日2020-01-23
公開日2020-03-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription.
Proc.Natl.Acad.Sci.USA, 117, 2020
6LQN
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BU of 6lqn by Molmil
EBV tegument protein BBRF2
分子名称: Cytoplasmic envelopment protein 1, NITRATE ION, SULFATE ION
著者He, H.P, Luo, M, Cao, Y.L, Gao, S.
登録日2020-01-14
公開日2020-10-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.600022 Å)
主引用文献Structure of Epstein-Barr virus tegument protein complex BBRF2-BSRF1 reveals its potential role in viral envelopment.
Nat Commun, 11, 2020
6XZG
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BU of 6xzg by Molmil
Influenza C virus polymerase in complex with chicken ANP32A - Subclass 3
分子名称: Influenza viral RNA (vRNA) promoter 47mer, LRRcap domain-containing protein, Polymerase acidic protein, ...
著者Carrique, L, Keown, J.R, Fan, H, Grimes, J.M, Fodor, E.
登録日2020-02-04
公開日2020-11-25
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Host ANP32A mediates the assembly of the influenza virus replicase.
Nature, 587, 2020
6SCU
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BU of 6scu by Molmil
THERMOLYSIN IN COMPLEX WITH FRAGMENT J88
分子名称: 4-diazanyl-4-oxidanylidene-butanoic acid, CALCIUM ION, DIMETHYL SULFOXIDE, ...
著者Magari, F, Heine, A, Klebe, G.
登録日2019-07-25
公開日2020-08-26
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献THERMOLYSIN IN COMPLEX WITH FRAGMENT J88
To Be Published
6SD1
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BU of 6sd1 by Molmil
Structure of the RBM3/collar region of the Salmonella flagella MS-ring protein FliF with 33-fold symmetry applied
分子名称: Flagellar M-ring protein
著者Johnson, S, Fong, Y.H, Deme, J.C, Furlong, E.J, Kuhlen, L, Lea, S.M.
登録日2019-07-26
公開日2020-03-18
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Symmetry mismatch in the MS-ring of the bacterial flagellar rotor explains the structural coordination of secretion and rotation.
Nat Microbiol, 5, 2020
6LY3
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BU of 6ly3 by Molmil
PylRS C-terminus domain mutant bound with 3-Benzothienyl-L-alanine and AMPNP
分子名称: 3-(1-benzothiophen-3-yl)-L-alanine, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Weng, J.H, Tsai, M.D, Wang, Y.S.
登録日2020-02-13
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89590144 Å)
主引用文献Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
7MKA
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BU of 7mka by Molmil
Structure of EC+EC (leading EC-focused)
分子名称: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ...
著者Yang, C, Murakami, K.
登録日2021-04-22
公開日2022-04-27
最終更新日2023-05-17
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II.
Mol.Cell, 82, 2022
6M1W
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BU of 6m1w by Molmil
Structure of the 2-Aminoisobutyric acid Monooxygenase Hydroxylase
分子名称: Amidohydrolase, CHLORIDE ION, FE (III) ION, ...
著者Hibi, M, Mikami, B, Ogawa, J.
登録日2020-02-26
公開日2021-01-06
最終更新日2021-01-27
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A three-component monooxygenase from Rhodococcus wratislaviensis may expand industrial applications of bacterial enzymes.
Commun Biol, 4, 2021
5WK3
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BU of 5wk3 by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN CCL17 AND M116 FAB
分子名称: C-C motif chemokine 17, GLYCEROL, M116 HEAVY CHAIN, ...
著者Teplyakov, A, Obmolova, G, Gilliland, G.L.
登録日2017-07-24
公開日2017-12-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural insights into chemokine CCL17 recognition by antibody M116.
Biochem Biophys Rep, 13, 2018

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件を2024-10-16に公開中

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