PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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7L0X	Human Bocavirus 2 (pH 2.6) 分子名称: VP2 著者 Luo, M, Mietzsch, M, Agbandje-McKenna, M. 登録日 2020-12-13 公開日 2021-01-27 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.51 Å) 主引用文献 pH-Induced Conformational Changes of Human Bocavirus Capsids. J.Virol., 95, 2021
4HON	Crystal structure of human JMJD2D/KDM4D in complex with an H3K9me3 peptide and 2-oxoglutarate 分子名称: 1,3-PROPANDIOL, 2-OXOGLUTARIC ACID, Histone H3 Peptide, ... 著者 Krishnan, S, Trievel, R.C. 登録日 2012-10-22 公開日 2012-11-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.799 Å) 主引用文献 Structural and Functional Analysis of JMJD2D Reveals Molecular Basis for Site-Specific Demethylation among JMJD2 Demethylases. Structure, 21, 2013
5EXC	Photoconverted red fluorescent protein DendRFP 分子名称: GLYCEROL, Green fluorescent protein, MAGNESIUM ION 著者 Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V. 登録日 2015-11-23 公開日 2016-08-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Crystal structure of the fluorescent protein from Dendronephthya sp. in both green and photoconverted red forms. Acta Crystallogr D Struct Biol, 72, 2016
4MEC	Crystal structure of RAT Heme oxygenase-1 in complex with ZN(II)-Protoporphyrin IX 分子名称: Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING ZN 著者 Sugishima, M. 登録日 2013-08-26 公開日 2014-08-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Distal regulation of heme binding of heme oxygenase-1 mediated by conformational fluctuations Biochemistry, 54, 2015
4HHT	T. maritima RNase H2 G21S in complex with nucleic acid substrate and calcium ions 分子名称: CALCIUM ION, DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3'), DNA/RNA (5'-D(*GP*AP*CP*AP*C)-R(P*C)-D(P*TP*GP*AP*TP*TP*C)-3'), ... 著者 Rychlik, M.P, Nowotny, M. 登録日 2012-10-10 公開日 2013-02-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 RNase H2 roles in genome integrity revealed by unlinking its activities. Nucleic Acids Res., 41, 2013
8T5A	HIV-1 Integrase Catalytic Core Domain (CCD) F185H/Y99H/A128T Mutant Complexed with STP03-0404 分子名称: (2S)-tert-butoxy{4-(4-chlorophenyl)-2,3,6-trimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid, Integrase 著者 Dinh, T, Kvaratskhelia, M. 登録日 2023-06-12 公開日 2024-06-19 最終更新日 2024-07-31 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 The structural and mechanistic bases for the viral resistance to allosteric HIV-1 integrase inhibitor pirmitegravir. Biorxiv, 2024
5EZM	Crystal Structure of ArnT from Cupriavidus metallidurans in the apo state 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferases of PMT family, CHLORIDE ION, ... 著者 Petrou, V.I, Clarke, O.B, Tomasek, D, Banerjee, S, Rajashankar, K.R, Mancia, F, New York Consortium on Membrane Protein Structure (NYCOMPS) 登録日 2015-11-26 公開日 2016-02-17 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structures of aminoarabinose transferase ArnT suggest a molecular basis for lipid A glycosylation. Science, 351, 2016
5F06	Crystal structure of glutathione transferase F7 from Populus trichocarpa 分子名称: GLUTATHIONE, Glutathione S-transferase family protein, SULFATE ION 著者 Didierjean, C, Rouhier, N, Pegeot, H, Gense, F. 登録日 2015-11-27 公開日 2016-12-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural plasticity among glutathione transferase Phi members: natural combination of catalytic residues confers dual biochemical activities. FEBS J., 284, 2017
3F37	Apoferritin: complex with 2,6-dimethylphenol 分子名称: 2,6-dimethylphenol, ACETATE ION, CADMIUM ION, ... 著者 Vedula, L.S, Economou, N.J, Rossi, M.J, Eckenhoff, R.G, Loll, P.J. 登録日 2008-10-30 公開日 2009-07-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 A unitary anesthetic binding site at high resolution. J.Biol.Chem., 284, 2009
7KHV	CpOGA IN COMPLEX WITH LIGAND 54 分子名称: CALCIUM ION, CHLORIDE ION, N-(5-{[6-(5-methyl[1,2,4]triazolo[1,5-a]pyrimidin-7-yl)-2,6-diazaspiro[3.4]octan-2-yl]methyl}-1,3-thiazol-2-yl)acetamide, ... 著者 Shaffer, P.L. 登録日 2020-10-22 公開日 2020-12-02 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Diazaspirononane Nonsaccharide Inhibitors of O-GlcNAcase (OGA) for the Treatment of Neurodegenerative Disorders. J.Med.Chem., 63, 2020
7KJU	Cgi121-tRNA complex 分子名称: MAGNESIUM ION, RNA (75-MER) 著者 Ceccarelli, D.F, Beenstock, J, Wan, L.C.K, Sicheri, F. 登録日 2020-10-26 公開日 2020-12-02 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.102 Å) 主引用文献 A substrate binding model for the KEOPS tRNA modifying complex. Nat Commun, 11, 2020
7Q4W	CryoEM structure of electron bifurcating Fe-Fe hydrogenase HydABC complex A. woodii in the oxidised state 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Kumar, A, Saura, P, Poeverlein, M.C, Gamiz-Hernandez, A.P, Kaila, V.R.I, Mueller, V, Schuller, J.M. 登録日 2021-11-02 公開日 2023-02-15 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.78 Å) 主引用文献 Molecular Basis of the Electron Bifurcation Mechanism in the [FeFe]-Hydrogenase Complex HydABC. J.Am.Chem.Soc., 145, 2023
4HIG	Ultrahigh-resolution crystal structure of Z-DNA in complex with Mn2+ ion. 分子名称: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MANGANESE (II) ION, SPERMINE (FULLY PROTONATED FORM) 著者 Drozdzal, P, Gilski, M, Kierzek, R, Lomozik, L, Jaskolski, M. 登録日 2012-10-11 公開日 2013-06-05 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (0.75 Å) 主引用文献 Ultrahigh-resolution crystal structures of Z-DNA in complex with Mn(2+) and Zn(2+) ions. Acta Crystallogr.,Sect.D, 69, 2013
4MGQ	PbXyn10C CBM APO 分子名称: CALCIUM ION, Glycosyl hydrolase family 10 著者 Chekan, J.R, Nair, S.K. 登録日 2013-08-28 公開日 2014-08-20 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Xylan utilization in human gut commensal bacteria is orchestrated by unique modular organization of polysaccharide-degrading enzymes. Proc.Natl.Acad.Sci.USA, 111, 2014
7Q4V	Electron bifurcating hydrogenase - HydABC from A. woodii 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ... 著者 Katsyv, A, Kumar, A, Saura, P, Poeverlein, M.C, Freibert, S.A, Stripp, S, Jain, S, Gamiz-Hernandez, A.P, Kaila, V.R.I, Mueller, V, Schuller, J.M. 登録日 2021-11-02 公開日 2023-02-22 最終更新日 2023-03-29 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Molecular Basis of the Electron Bifurcation Mechanism in the [FeFe]-Hydrogenase Complex HydABC. J.Am.Chem.Soc., 145, 2023
7PU4	Crystal structure of the dimer RBP-N and RBP-Trunc from Thermotoga maritima Ribose Binding Protein 分子名称: Ribose ABC transporter, periplasmic ribose-binding protein 著者 Romero-Romero, S, Michel, F, Hocker, B. 登録日 2021-09-28 公開日 2023-03-08 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Retracing the evolution of a modern periplasmic binding protein. Protein Sci., 2023
7PSC	Crystal structure of the disease-causing I358T mutant of the human dihydrolipoamide dehydrogenase 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Dihydrolipoyl dehydrogenase, mitochondrial, ... 著者 Nemes-Nikodem, E, Szabo, E, Zambo, Z, Vass, K.R, Taberman, H, Torocsik, B, Weiss, M.S, Adam-Vizi, V, Ambrus, A. 登録日 2021-09-22 公開日 2023-04-05 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.436 Å) 主引用文献 Structural and Biochemical Investigation of Selected Pathogenic Mutants of the Human Dihydrolipoamide Dehydrogenase. Int J Mol Sci, 24, 2023
3FB2	Crystal structure of the human brain alpha spectrin repeats 15 and 16. Northeast Structural Genomics Consortium target HR5563a. 分子名称: Spectrin alpha chain, brain spectrin 著者 Vorobiev, S.M, Su, M, Seetharaman, J, Shastry, R, Foote, E.L, Ciccosanti, C, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG) 登録日 2008-11-18 公開日 2008-11-25 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the human brain alpha spectrin repeats 15 and 16. To be Published
5CLO	Crystal structure of a 4-oxalocrotonate tautomerase mutant in complex with nitrostyrene at 2.3 Angstrom 分子名称: 2-hydroxymuconate tautomerase, trans beta nitrostyrene 著者 Thunnissen, A.M.W.H, Poddar, H. 登録日 2015-07-16 公開日 2016-03-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Using mutability landscapes of a promiscuous tautomerase to guide the engineering of enantioselective Michaelases. Nat Commun, 7, 2016
5F3W	Structure of the ATPrS-Mre11/Rad50-DNA complex 分子名称: 27-MER DNA, DNA double-strand break repair Rad50 ATPase,DNA double-strand break repair Rad50 ATPase, DNA double-strand break repair protein Mre11, ... 著者 Liu, Y. 登録日 2015-12-03 公開日 2016-03-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 ATP-dependent DNA binding, unwinding, and resection by the Mre11/Rad50 complex Embo J., 35, 2016
4LQG	X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a phosphoramidate inhibitor CTT1056 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Barinka, C, Skultetyova, L. 登録日 2013-07-18 公開日 2014-12-31 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Structure-Activity Relationship of (18)F-Labeled Phosphoramidate Peptidomimetic Prostate-Specific Membrane Antigen (PSMA)-Targeted Inhibitor Analogues for PET Imaging of Prostate Cancer. J.Med.Chem., 59, 2016
2DCQ	Fully automated NMR structure determination of the rhodanese homology domain At4g01050(175-295) from Arabidopsis thaliana 分子名称: Putative protein At4g01050 著者 Lopez-Mendez, B, Guntert, P. 登録日 2006-01-12 公開日 2006-10-17 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Automated protein structure determination from NMR spectra J.AM.CHEM.SOC., 128, 2006
7Q4X	Crystal Structure of Equine Serum Albumin in Complex with Cefaclor 分子名称: (2S)-2-hydroxybutanedioic acid, ACETATE ION, Albumin, ... 著者 Duszynski, K, Sekula, B, Bujacz, A. 登録日 2021-11-02 公開日 2023-05-17 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.12 Å) 主引用文献 Binding of beta-lactam antibiotics by equine, caprine and ovine serum albumins To Be Published
5BY6	Crystal structure of Trichinella spiralis thymidylate synthase complexed with dUMP 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, ... 著者 Dowiercial, A, Jarmula, A, Rypniewski, W, Fraczyk, T, Wilk, P, Rode, W. 登録日 2015-06-10 公開日 2015-06-17 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS. J. Mol. Graph. Model., 77, 2017
7KRM	Putative FabG bound to NADH from Acinetobacter baumannii 分子名称: 3-oxoacyl-[acyl-carrier-protein] reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Shaw, K.I, Smith, K.M, Cross, E.M. 登録日 2020-11-20 公開日 2020-12-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Putative FabG bound to NADH from Acinetobacter baumannii To Be Published

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