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1P7G
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BU of 1p7g by Molmil
Crystal structure of superoxide dismutase from Pyrobaculum aerophilum
分子名称: ACETATE ION, BETA-MERCAPTOETHANOL, Superoxide dismutase
著者Lee, S, Sawaya, M.R, Eisenberg, D.
登録日2003-05-01
公開日2003-12-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of superoxide dismutase from Pyrobaculum aerophilum presents a challenging case in molecular replacement with multiple molecules, pseudo-symmetry and twinning.
Acta Crystallogr.,Sect.D, 59, 2003
7POQ
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BU of 7poq by Molmil
Crystal structure of profragilysin-3 (proBFT-3) from Bacteroides fragilis in complex with foliosidine in P41212.
分子名称: 1,2-ETHANEDIOL, BFT-3, CHLORIDE ION, ...
著者Eckhard, U, Guevara, T, Gomis-Ruth, F.X.
登録日2021-09-09
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Repositioning small molecule drugs as allosteric inhibitors of the BFT-3 toxin from enterotoxigenic Bacteroides fragilis.
Protein Sci., 31, 2022
7K9M
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BU of 7k9m by Molmil
Crystal structure of the complex of M. tuberculosis PheRS with cognate precursor tRNA and 5'-O-(N-phenylalanyl)sulfamoyl-adenosine
分子名称: 5'-O-(L-phenylalanylsulfamoyl)adenosine, GLYCEROL, HEXAETHYLENE GLYCOL, ...
著者Michalska, K, Chang, C, Jedrzejczak, R, Wower, J, Baragana, B, Forte, B, Gilbert, I.H, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-09-29
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mycobacterium tuberculosis Phe-tRNA synthetase: structural insights into tRNA recognition and aminoacylation.
Nucleic Acids Res., 49, 2021
8TRO
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BU of 8tro by Molmil
Rod from high-resolution phycobilisome quenched by OCP (local refinement)
分子名称: C-phycocyanin alpha subunit, C-phycocyanin beta subunit, PHYCOCYANOBILIN, ...
著者Sauer, P.V, Sutter, M, Cupellini, L.
登録日2023-08-09
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (1.9 Å)
主引用文献Structural and quantum chemical basis for OCP-mediated quenching of phycobilisomes.
Sci Adv, 10, 2024
7KCN
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BU of 7kcn by Molmil
Reconstructed ancestor of HIUases and Transthyretins
分子名称: 1,2-ETHANEDIOL, HIUase-TTR ancestor, PHOSPHATE ION
著者Nagem, R.A.P, Bleicher, L, Costa, M.A.F.
登録日2020-10-06
公開日2021-05-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Reenacting the Birth of a Function: Functional Divergence of HIUases and Transthyretins as Inferred by Evolutionary and Biophysical Studies.
J.Mol.Evol., 89, 2021
5CAL
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BU of 5cal by Molmil
EGFR kinase domain mutant "TMLR" with compound 24
分子名称: 2,2-dimethyl-3-[(4-{[2-methyl-1-(propan-2-yl)-1H-imidazo[4,5-c]pyridin-6-yl]amino}pyrimidin-2-yl)amino]propanamide, Epidermal growth factor receptor
著者Eigenbrot, C, Yu, C.
登録日2015-06-29
公開日2015-10-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Noncovalent Mutant Selective Epidermal Growth Factor Receptor Inhibitors: A Lead Optimization Case Study.
J.Med.Chem., 58, 2015
8TFF
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BU of 8tff by Molmil
PorX with BeF3 phosphate analog
分子名称: ACETATE ION, BERYLLIUM TRIFLUORIDE ION, CALCIUM ION, ...
著者Saran, A, Zeytuni, N.
登録日2023-07-11
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献PorX with BeF3 phosphate analog
To Be Published
7JXX
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BU of 7jxx by Molmil
Structure of TTBK1 kinase domain in complex with Compound 3
分子名称: 4-(2-amino-5,6,7,8-tetrahydropyrimido[4',5':3,4]cyclohepta[1,2-b]indol-11-yl)-2-methylbut-3-yn-2-ol, SODIUM ION, Tau-tubulin kinase 1
著者Chodaprambil, J.V.
登録日2020-08-28
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Discovery of Potent and Brain-Penetrant Tau Tubulin Kinase 1 (TTBK1) Inhibitors that Lower Tau Phosphorylation In Vivo.
J.Med.Chem., 64, 2021
4MHI
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BU of 4mhi by Molmil
Crystal structure of a H5N1 influenza virus hemagglutinin from A/goose/Guangdong/1/96
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, ...
著者Zhu, X, Wilson, I.A.
登録日2013-08-29
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.595 Å)
主引用文献A Unique and Conserved Neutralization Epitope in H5N1 Influenza Viruses Identified by an Antibody against the A/Goose/Guangdong/1/96 Hemagglutinin.
J.Virol., 87, 2013
5CAX
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BU of 5cax by Molmil
CRYSTAL STRUCTURE OF METHANOSARCINA ACETIVORANS METHANOREDOXIN
分子名称: ACETIC ACID, CADMIUM ION, Glutaredoxin, ...
著者Yennawar, N.H, Yennawar, H.P, Ferry, G.J.
登録日2015-06-30
公開日2016-02-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.451 Å)
主引用文献Structural and Biochemical Characterizations of Methanoredoxin from Methanosarcina acetivorans, a Glutaredoxin-Like Enzyme with Coenzyme M-Dependent Protein Disulfide Reductase Activity.
Biochemistry, 55, 2016
4M4S
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BU of 4m4s by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDP and formate ion mimic aIF2gamma*GDP*Pi complex (a formate ion substitutes for Pi)
分子名称: FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-08-07
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
5C0C
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BU of 5c0c by Molmil
1E6 TCR in complex with HLA-A02 carrying RQFGPDWIVA
分子名称: 1,2-ETHANEDIOL, 1E6 TCR Alpha Chain, 1E6 TCR Beta Chain, ...
著者Rizkallah, P.J, Bulek, A.M, Cole, D.K, Sewell, A.K.
登録日2015-06-12
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.974 Å)
主引用文献Hotspot autoimmune T cell receptor binding underlies pathogen and insulin peptide cross-reactivity.
J.Clin.Invest., 126, 2016
5F5W
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BU of 5f5w by Molmil
Crystal structure of the alpha subunit of glycyl tRNA synthetase (GlyRS) from Aquifex aeolicus in complex with an analog of glycyl adenylate (Gly-SA)
分子名称: 5'-O-(glycylsulfamoyl)adenosine, Glycine--tRNA ligase alpha subunit
著者Valencia-Sanchez, M.I, Torres-Larios, A.
登録日2015-12-04
公開日2016-05-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structural Insights into the Polyphyletic Origins of Glycyl tRNA Synthetases.
J.Biol.Chem., 291, 2016
8TED
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BU of 8ted by Molmil
PorX primitive orthorhombic crystal form
分子名称: ACETATE ION, BROMIDE ION, CALCIUM ION, ...
著者Saran, A, Zeytuni, N.
登録日2023-07-06
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献PorX primitive orthorhombic crystal form
To Be Published
3F1A
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BU of 3f1a by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with the inhibitor N-(2-nitroso-2-oxoethyl)benzenesulfonamide
分子名称: CALCIUM ION, Macrophage metalloelastase, N-oxo-2-(phenylsulfonylamino)ethanamide, ...
著者Calderone, V.
登録日2008-10-27
公開日2008-11-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Exploring the subtleties of drug-receptor interactions: the case of matrix metalloproteinases.
J.Am.Chem.Soc., 129, 2007
3AC0
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BU of 3ac0 by Molmil
Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose
分子名称: Beta-glucosidase I, beta-D-glucopyranose
著者Yoshida, E, Hidaka, M, Fushinobu, S, Katayama, T, Kumagai, H.
登録日2009-12-25
公開日2010-08-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Role of a PA14 domain in determining substrate specificity of a glycoside hydrolase family 3 beta-glucosidase from Kluyveromyces marxianus.
Biochem.J., 431, 2010
5F77
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BU of 5f77 by Molmil
Crystal structure of Mutant S12T of adenosine/Methylthioadenosine phosphorylase from Schistosoma mansoni in complex with Adenine
分子名称: ADENINE, Methylthioadenosine phosphorylase, SULFATE ION
著者Torini, J.R.S, Brandao-Neto, J, DeMarco, R, Pereira, H.M.
登録日2015-12-07
公開日2016-12-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystal Structure of Schistosoma mansoni Adenosine Phosphorylase/5'-Methylthioadenosine Phosphorylase and Its Importance on Adenosine Salvage Pathway.
PLoS Negl Trop Dis, 10, 2016
5F12
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WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE)
分子名称: FLAVIN MONONUCLEOTIDE, NAD(P)H dehydrogenase (quinone)
著者Degtjarik, O, Brynda, J, Ettrichova, O, Kuta Smatanova, I, Carey, J, Ettrich, R.
登録日2015-11-29
公開日2016-05-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Quantum Calculations Indicate Effective Electron Transfer between FMN and Benzoquinone in a New Crystal Structure of Escherichia coli WrbA.
J.Phys.Chem.B, 120, 2016
7PJM
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BU of 7pjm by Molmil
Crystal Structure of Ivosidenib-resistant IDH1 variant R132C S280F in complex with NADPH and Ca2+/2-Oxoglutarate
分子名称: 2-OXOGLUTARIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Reinbold, R, Rabe, P, Abboud, M.I, Schofield, C.J.
登録日2021-08-24
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Resistance to the isocitrate dehydrogenase 1 mutant inhibitor ivosidenib can be overcome by alternative dimer-interface binding inhibitors.
Nat Commun, 13, 2022
7Q5D
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BU of 7q5d by Molmil
Structure of EPCR in a non-canonical conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CYSTEINE, Endothelial protein C receptor, ...
著者Lopez-Sagaseta, J, Erausquin, E.
登録日2021-11-03
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of EPCR in a non-canonical conformation
Biorxiv, 2021
2DGN
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BU of 2dgn by Molmil
Mouse Muscle Adenylosuccinate Synthetase partially ligated complex with GTP, 2'-deoxy-IMP
分子名称: 9-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-6-(PHOSPHONOOXY)-9H-PURINE, Adenylosuccinate synthetase isozyme 1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Iancu, C.V, Zhou, Y, Borza, T, Fromm, H.J, Honzatko, R.B.
登録日2006-03-15
公開日2006-09-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Cavitation as a mechanism of substrate discrimination by adenylosuccinate synthetases.
Biochemistry, 45, 2006
5EVY
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BU of 5evy by Molmil
Salicylate hydroxylase substrate complex
分子名称: 2-HYDROXYBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, Salicylate hydroxylase
著者Morimoto, Y, Uemura, T.
登録日2015-11-20
公開日2015-12-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献The catalytic mechanism of decarboxylative hydroxylation of salicylate hydroxylase revealed by crystal structure analysis at 2.5 angstrom resolution
Biochem.Biophys.Res.Commun., 469, 2016
5C22
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BU of 5c22 by Molmil
Crystal structure of Zn-bound HlyD from E. coli
分子名称: Chromosomal hemolysin D, ZINC ION
著者Ha, N.C, Kim, J.S.
登録日2015-06-15
公開日2016-02-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Crystal Structure of a Soluble Fragment of the Membrane Fusion Protein HlyD in a Type I Secretion System of Gram-Negative Bacteria
Structure, 24, 2016
8TQD
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BU of 8tqd by Molmil
NF-Kappa-B1 Bound with a Covalent Inhibitor
分子名称: 1-(2-bromo-4-chlorophenyl)-N-{(3S)-1-[(E)-iminomethyl]pyrrolidin-3-yl}methanesulfonamide, Nuclear factor NF-kappa-B p105 subunit
著者Hilbert, B.J.
登録日2023-08-07
公開日2024-04-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献DrugMap: A quantitative pan-cancer analysis of cysteine ligandability.
Cell, 187, 2024
5C07
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1E6 TCR in complex with HLA-A02 carrying YQFGPDFPIA
分子名称: 1,2-ETHANEDIOL, 1E6 TCR Alpha Chain, 1E6 TCR Beta Chain, ...
著者Rizkallah, P.J, Bulek, A.M, Cole, D.K, Sewell, A.K.
登録日2015-06-12
公開日2016-05-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Hotspot autoimmune T cell receptor binding underlies pathogen and insulin peptide cross-reactivity.
J.Clin.Invest., 126, 2016

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