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PDB: 292 件

7T2D
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Crystal structure of the B1 TCR in complex with HLA-DP4-Ply
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, HLA class II histocompatibility antigen, DP alpha 1 chain, ...
著者Ciacchi, L, Farenc, C, Petersen, J, Reid, H.H, Rossjohn, J.
登録日2021-12-03
公開日2022-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献CD4 + T cell-mediated recognition of a conserved cholesterol-dependent cytolysin epitope generates broad antibacterial immunity.
Immunity, 56, 2023
7T4G
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The Envelope Glycoprotein SIVmac239.K180S SOSIP trimer in complex with 3 copies of the neutralizing antibody K11
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Berndsen, Z.T, Ward, A.B.
登録日2021-12-09
公開日2022-10-19
最終更新日2023-07-05
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Molecular insights into antibody-mediated protection against the prototypic simian immunodeficiency virus.
Nat Commun, 13, 2022
7TF8
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SARS-CoV-2 Omicron 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Stalls, V, Acharya, P.
登録日2022-01-06
公開日2022-02-16
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Structural diversity of the SARS-CoV-2 Omicron spike.
Mol.Cell, 82, 2022
7TFN
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Cryo-EM structure of CD4bs antibody Ab1303 in complex with HIV-1 Env trimer BG505 SOSIP.664
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-HIV-1 CD4bs antibody Fab Ab1303 - Heavy chain, ...
著者Yang, Z, Bjorkman, P.J.
登録日2022-01-06
公開日2022-01-19
最終更新日2022-02-23
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Neutralizing antibodies induced in immunized macaques recognize the CD4-binding site on an occluded-open HIV-1 envelope trimer.
Nat Commun, 13, 2022
7U7N
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IL-27 quaternary receptor signaling complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-27 receptor subunit alpha, ...
著者Caveney, N.A, Glassman, C.R, Jude, K.M, Tsutsumi, N, Garcia, K.C.
登録日2022-03-07
公開日2022-05-25
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structure of the IL-27 quaternary receptor signaling complex.
Elife, 11, 2022
7UCF
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Structure of the BG505 SOSIP.664 trimer in complex with neutralizing antibody Fab fragments 10-1074 and BG24
分子名称: 10-1074 Fab heavy chain, 10-1074 Fab light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Barnes, C.O, Bjorkman, P.J.
登録日2022-03-16
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献A naturally arising broad and potent CD4-binding site antibody with low somatic mutation.
Sci Adv, 8, 2022
7UOT
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Native Lassa glycoprotein in complex with neutralizing antibodies 8.9F and 37.2D
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 37.2D heavy chain (variable domain), ...
著者Li, H, Saphire, E.O.
登録日2022-04-13
公開日2022-11-02
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献A cocktail of protective antibodies subverts the dense glycan shield of Lassa virus.
Sci Transl Med, 14, 2022
7W73
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Cryo-EM map of PEDV S protein with one protomer in the D0-up conformation while the other two in the D0-down conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Hsu, S.T.D, Draczkowski, P, Wang, Y.S.
登録日2021-12-03
公開日2022-08-03
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献In situ structure and dynamics of an alphacoronavirus spike protein by cryo-ET and cryo-EM.
Nat Commun, 13, 2022
7WUH
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SARS-CoV-2 Spike in complex with Fab of m31A7
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Chen, X, Wu, Y.-M.
登録日2022-02-08
公開日2022-03-23
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Vaccination with SARS-CoV-2 spike protein lacking glycan shields elicits enhanced protective responses in animal models.
Sci Transl Med, 14, 2022
7X36
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Crystal Structure of hetero-Diels-Alderase EupfF
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhou, J, Lu, J.
登録日2022-02-28
公開日2023-04-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Calcium-dependent glycosylated enzyme in the tandem hetero-Diels-Alder reaction
To Be Published
7XWA
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Crystal structure of the receptor binding domain of SARS-CoV-2 Omicron BA.4/5 variant spike protein in complex with its receptor ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Processed angiotensin-converting enzyme 2, ...
著者Suzuki, T, Kimura, K, Hashiguchi, T.
登録日2022-05-26
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.36 Å)
主引用文献Virological characteristics of the SARS-CoV-2 Omicron BA.2 subvariants, including BA.4 and BA.5.
Cell, 185, 2022
7YMT
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BU of 7ymt by Molmil
Cryo-EM structure of MERS-CoV spike protein, Two RBD-up conformation 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Hsu, S.T.D, Chang, N.E, Weng, Z.W, Yang, T.J, Draczkowski, P.
登録日2022-07-29
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (6.55 Å)
主引用文献GlycoSHIELD: a versatile pipeline to assess glycan impact on protein structures
To Be Published
7YN0
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BU of 7yn0 by Molmil
Cryo-EM structure of MERS-CoV spike protein, all RBD-down conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Hsu, S.T.D, Chang, N.E, Weng, Z.W, Yang, T.J, Draczkowski, P.
登録日2022-07-29
公開日2023-08-09
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献GlycoSHIELD: a versatile pipeline to assess glycan impact on protein structures
To Be Published
7Z53
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Structure of native leukocyte myeloperoxidase in complex with a truncated version (SPIN truncated) of the Staphyloccal Peroxidase Inhibitor SPIN from Staphylococcus aureus
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pfanzagl, V, Brito, J.A.
登録日2022-03-07
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献The staphylococcal inhibitory protein SPIN binds to human myeloperoxidase with picomolar affinity but only dampens halide oxidation.
J.Biol.Chem., 298, 2022
7ZLK
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BU of 7zlk by Molmil
AMC009 SOSIPv5.2 in complex with Fabs ACS101 and ACS124
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACS114 heavy chain, ...
著者van Schooten, J, Ozorowski, G, Ward, A.
登録日2022-04-15
公開日2022-09-21
最終更新日2022-11-30
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Complementary antibody lineages achieve neutralization breadth in an HIV-1 infected elite neutralizer.
Plos Pathog., 18, 2022
7ZXG
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Pfs48/45 bound to Fab fragment of monoclonal antibody 10D8
分子名称: 10D8 heavy chain, 10D8 light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Ko, K.T, Lennartz, F.L, Higgins, M.K.
登録日2022-05-20
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structure of the malaria vaccine candidate Pfs48/45 and its recognition by transmission blocking antibodies.
Nat Commun, 13, 2022
7ZYF
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Insulin regulated aminopeptidase (IRAP) in complex with a nanomolar alpha hydroxy beta amino acid based inhibitor.
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mpakali, A, Stratikos, E, Giastas, P, Papakyriakou, A.
登録日2022-05-24
公開日2022-07-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Discovery of Selective Nanomolar Inhibitors for Insulin-Regulated Aminopeptidase Based on alpha-Hydroxy-beta-amino Acid Derivatives of Bestatin.
J.Med.Chem., 65, 2022
8ACF
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BU of 8acf by Molmil
Structure of the argX-117 in complex with a complement C2 fragment at low pH
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Olesen, H.G, Andersen, G.R.
登録日2022-07-05
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-function analysis of ARGX-117, a calcium- and pH-dependent clinical phase complement C2 blocking antibody
To be published
8AWK
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Structure of recombinant human beta-glucocerebrosidase in complex with D-carbaxylosyl chloride
分子名称: (2~{S},3~{S},4~{R})-cyclohex-5-ene-1,2,3,4-tetrol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Rowland, R.J, Davies, G.J.
登録日2022-08-30
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Single turnover covalent inhibitors for functional chaperoning of lysosomal glycoside hydrolases
To be published
8AWR
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Structure of recombinant human beta-glucocerebrosidase in complex with L-carbaxylosyl chloride
分子名称: (1~{S},2~{R},3~{S},6~{S})-6-chloranylcyclohex-4-ene-1,2,3-triol, (1~{S},2~{S},3~{S},4~{R})-cyclohexane-1,2,3,4-tetrol, 1,2-ETHANEDIOL, ...
著者Rowland, R.J, Davies, G.J.
登録日2022-08-30
公開日2024-03-13
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Single turnover covalent inhibitors for functional chaperoning of lysosomal glycoside hydrolases
To be published
8BEC
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BU of 8bec by Molmil
Crystal structure of the SARS-CoV-2 S RBD in complex with pT1375 scFV
分子名称: SULFATE ION, Spike protein S1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Hansen, G, Ssebyatika, G.L, Krey, T.
登録日2022-10-21
公開日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Activity of broadly neutralizing antibodies against sarbecoviruses: a trade-off between SARS-CoV-2 variants and distant coronaviruses?
To be published
8C6I
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BU of 8c6i by Molmil
TMEM2 ectodomain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Hohenester, E.
登録日2023-01-11
公開日2023-02-01
最終更新日2023-06-07
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the transmembrane protein 2 (TMEM2) ectodomain and its apparent lack of hyaluronidase activity.
Wellcome Open Res, 8, 2023
8D4R
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Crystal Structure of Mosaic HIV-1 Envelope (MosM3.2) in Complex with antibodies PGT124 and 35O22 at 3.8 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab heavy chain, ...
著者Xian, Y, Wilson, I.A.
登録日2022-06-02
公開日2023-12-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.81 Å)
主引用文献The domain-swaped dimer of the HIV-1 CD4bs targeting antibody 21N13
To Be Published
8D50
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Crystal Structure of Mosaic HIV-1 Envelope (MosM3.1) in Complex with antibodies PGT124 and 35O22 at 4.3 Angstrom
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab heavy chain, ...
著者Xian, Y, Wilson, I.A.
登録日2022-06-03
公開日2023-12-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (4.32 Å)
主引用文献Structural and Antigenic Characterization of B Cell Mosaic Env Trimers
To Be Published
8DF1
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Chi3l1 bound by antibody C59
分子名称: C59 Fab Heavy chain, C59 Fab Light chain, Chitinase-3-like protein 1, ...
著者Wrapp, D, McLellan, J.S.
登録日2022-06-21
公開日2023-03-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献A novel humanized Chi3l1 blocking antibody attenuates acetaminophen-induced liver injury in mice.
Antib Ther, 6, 2023

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件を2024-07-24に公開中

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