PDB: 954 件ウェブページステータス検索Chemie searchBIRD

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5W4P	Structure of the E28A mutant of the HIV-1 capsid protein 分子名称: CHLORIDE ION, Capsid protein p24, IODIDE ION 著者 Gres, A.T, Kirby, K.A, Sarafianos, S.G. 登録日 2017-06-12 公開日 2018-06-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket. MBio, 10, 2019
5WVC	Structure of the CARD-CARD disk 分子名称: Apoptotic protease-activating factor 1, Caspase, IODIDE ION 著者 Lin, S.C, Lo, Y.C, Su, T.W. 登録日 2016-12-24 公開日 2017-04-19 実験手法 X-RAY DIFFRACTION (2.993 Å) 主引用文献 Structural Insights into DD-Fold Assembly and Caspase-9 Activation by the Apaf-1 Apoptosome. Structure, 25, 2017
5V62	Phospho-ERK2 bound to bivalent inhibitor SBP3 分子名称: 5-(2-PHENYLPYRAZOLO[1,5-A]PYRIDIN-3-YL)-1H-PYRAZOLO[3,4-C]PYRIDAZIN-3-AMINE, GLYCEROL, Mitogen-activated protein kinase 1, ... 著者 Lechtenberg, B.C, Riedl, S.J. 登録日 2017-03-15 公開日 2017-07-26 最終更新日 2019-12-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure-Guided Strategy for the Development of Potent Bivalent ERK Inhibitors. ACS Med Chem Lett, 8, 2017
5W4O	Structure of the R18A mutant of the HIV-1 capsid protein 分子名称: CHLORIDE ION, Capsid protein p24, IODIDE ION 著者 Gres, A.T, Kirby, K.A, Sarafianos, S.G. 登録日 2017-06-12 公開日 2018-06-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.093 Å) 主引用文献 Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket. MBio, 10, 2019
5VVT	Structural Investigations of the Substrate Specificity of Human O-GlcNAcase 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ELK1 peptide, Protein O-GlcNAcase 著者 Li, B, Jiang, J, Li, H, Hu, C.-W. 登録日 2017-05-20 公開日 2017-09-27 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural insights into the substrate binding adaptability and specificity of human O-GlcNAcase. Nat Commun, 8, 2017
7W5O	Crystal structure of ERK2 with an allosteric inhibitor 分子名称: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, 13-[4-({Imidazo[1,2-a]pyridin-2-yl}methoxy)phenyl]-4,8-dioxa-12,14,16,18-tetraazatetracyclo[9.7.0.0^{3,9}.0^{12,17}]octadeca-1(11),2,9,15,17-pentaen-15-amine, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Yoshida, M, Kinoshita, T. 登録日 2021-11-30 公開日 2022-02-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Identification of a novel target site for ATP-independent ERK2 inhibitors. Biochem.Biophys.Res.Commun., 593, 2022
5WP1	Complex of ERK2 with 5,7-dihydroxychromone 分子名称: 5,7-dihydroxy-4H-1-benzopyran-4-one, BENZOIC ACID, Mitogen-activated protein kinase 1, ... 著者 Kurinov, I, Malakhova, M. 登録日 2017-08-03 公開日 2018-08-08 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Multiple phytochemicals at low doses accumulatively inhibit one key protein in cancers To Be Published
7UGB	Crystal structure of rat ERK2 complexed with docking peptide from ISG20 分子名称: Interferon-stimulated gene 20 kDa protein, Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 著者 Torres Robles, J, Stiegler, A.L, Boggon, T.J, Turk, B.E. 登録日 2022-03-24 公開日 2023-03-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 To be determined To Be Published
5V61	Phospho-ERK2 bound to bivalent inhibitor SBP2 分子名称: 2-oxo-6,9,12,15-tetraoxa-3-azaoctadecan-18-oic acid, 5-(2-PHENYLPYRAZOLO[1,5-A]PYRIDIN-3-YL)-1H-PYRAZOLO[3,4-C]PYRIDAZIN-3-AMINE, GLYCEROL, ... 著者 Lechtenberg, B.C, Riedl, S.J. 登録日 2017-03-15 公開日 2017-07-26 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure-Guided Strategy for the Development of Potent Bivalent ERK Inhibitors. ACS Med Chem Lett, 8, 2017
5V60	Phospho-ERK2 bound to AMP-PCP 分子名称: GLYCEROL, MAGNESIUM ION, Mitogen-activated protein kinase 1, ... 著者 Lechtenberg, B.C, Riedl, S.J. 登録日 2017-03-15 公開日 2017-07-26 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Structure-Guided Strategy for the Development of Potent Bivalent ERK Inhibitors. ACS Med Chem Lett, 8, 2017
5UMO	STRUCTURE OF EXTRACELLULAR SIGNAL-REGULATED KINASE 分子名称: Mitogen-activated protein kinase 1, SULFATE ION 著者 CHLEBOWICZ, J, ZHANG, F, GOLDSMITH, E.J. 登録日 2017-01-27 公開日 2017-03-01 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Atomic structure of the MAP kinase ERK2 at 2.3 A resolution. Nature, 367, 1994
5UPW	CryoEM Structure Refinement by Integrating NMR Chemical Shifts with Molecular Dynamics Simulations 分子名称: Gag polyprotein 著者 Perilla, J.R. 登録日 2017-02-04 公開日 2017-03-01 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 CryoEM Structure Refinement by Integrating NMR Chemical Shifts with Molecular Dynamics Simulations. J Phys Chem B, 121, 2017
7M9F	Structure of the wild-type native full-length HIV-1 capsid protein in complex with ZW-1261 分子名称: HIV-1 capsid protein, IODIDE ION, N-(4-chlorophenyl)-Nalpha-[(5-hydroxy-1H-indol-3-yl)acetyl]-N-methyl-L-phenylalaninamide 著者 Kirby, K.A, Sarafianos, S.G. 登録日 2021-03-31 公開日 2022-04-06 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Molecular Dynamics Free Energy Simulations Reveal the Mechanism for the Antiviral Resistance of the M66I HIV-1 Capsid Mutation. Viruses, 13, 2021
7MN0	N74D mutant of the HIV-1 capsid protein 分子名称: IODIDE ION, capsid protein 著者 Gres, A.T, Kirby, K.A, Sarafianos, S.G. 登録日 2021-04-30 公開日 2022-05-04 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 TRIM5alpha Restriction of HIV-1-N74D Viruses in Lymphocytes Is Caused by a Loss of Cyclophilin A Protection. Viruses, 14, 2022
7MKC	N74D mutant of the HIV-1 capsid protein in complex with PF-3450074 (PF74) 分子名称: IODIDE ION, N-METHYL-NALPHA-[(2-METHYL-1H-INDOL-3-YL)ACETYL]-N-PHENYL-L-PHENYLALANINAMIDE, capsid protein 著者 Kirby, K.A, Sarafianos, S.G. 登録日 2021-04-23 公開日 2022-05-04 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 TRIM5alpha Restriction of HIV-1-N74D Viruses in Lymphocytes Is Caused by a Loss of Cyclophilin A Protection. Viruses, 14, 2022
7NQQ	Discovery of ASTX029, a clinical candidate which modulates the phosphorylation and catalytic activity of ERK1/2 分子名称: 2-[5-[5-chloranyl-2-(oxan-4-ylamino)pyrimidin-4-yl]-3-oxidanylidene-1~{H}-isoindol-2-yl]-~{N}-[(1~{S})-1-(hydroxymethyl)-2,3-dihydroinden-1-yl]ethanamide, DIMETHYL SULFOXIDE, Mitogen-activated protein kinase 1, ... 著者 O'Reilly, M. 登録日 2021-03-02 公開日 2021-10-06 実験手法 X-RAY DIFFRACTION (1.943 Å) 主引用文献 Discovery of ASTX029, A Clinical Candidate Which Modulates the Phosphorylation and Catalytic Activity of ERK1/2. J.Med.Chem., 64, 2021
8CKW	HIV-1 mature capsid pentamer from CA-IP6 CLPs 分子名称: Gag polyprotein 著者 Stacey, J.C.V, Briggs, J.A.G. 登録日 2023-02-16 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (3.12 Å) 主引用文献 Two structural switches in HIV-1 capsid regulate capsid curvature and host factor binding. Proc.Natl.Acad.Sci.USA, 120, 2023
7NQW	Discovery of ASTX029, a clinical candidate which modulates the phosphorylation and catalytic activity of ERK1/2 分子名称: 6-[5-chloranyl-2-(oxan-4-ylamino)pyrimidin-4-yl]-2-[2-oxidanylidene-2-(1,3,4,5-tetrahydro-2-benzazepin-2-yl)ethyl]-3~{H}-isoindol-1-one, DIMETHYL SULFOXIDE, Mitogen-activated protein kinase 1, ... 著者 O'Reilly, M. 登録日 2021-03-02 公開日 2021-10-06 実験手法 X-RAY DIFFRACTION (1.775 Å) 主引用文献 Discovery of ASTX029, A Clinical Candidate Which Modulates the Phosphorylation and Catalytic Activity of ERK1/2. J.Med.Chem., 64, 2021
8CL4	HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Sec24C peptide 分子名称: Gag polyprotein 著者 Stacey, J.C.V, Briggs, J.A.G. 登録日 2023-02-16 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (3.14 Å) 主引用文献 Two structural switches in HIV-1 capsid regulate capsid curvature and host factor binding. Proc.Natl.Acad.Sci.USA, 120, 2023
8CKZ	HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Nup153 peptide 分子名称: Gag polyprotein 著者 Stacey, J.C.V, Briggs, J.A.G. 登録日 2023-02-16 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Two structural switches in HIV-1 capsid regulate capsid curvature and host factor binding. Proc.Natl.Acad.Sci.USA, 120, 2023
8CKX	HIV-1 mature capsid hexamer next to pentamer (type I) from CA-IP6 CLPs 分子名称: Gag polyprotein 著者 Stacey, J.C.V, Briggs, J.A.G. 登録日 2023-02-16 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (2.97 Å) 主引用文献 Two structural switches in HIV-1 capsid regulate capsid curvature and host factor binding. Proc.Natl.Acad.Sci.USA, 120, 2023
8CL1	HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to CPSF6 peptide. 分子名称: Cleavage and polyadenylation specificity factor subunit 6, Gag polyprotein 著者 Stacey, J.C.V, Briggs, J.A.G. 登録日 2023-02-16 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Two structural switches in HIV-1 capsid regulate capsid curvature and host factor binding. Proc.Natl.Acad.Sci.USA, 120, 2023
8CKY	HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to Nup153 peptide 分子名称: Gag polyprotein, Nuclear pore complex protein Nup153 著者 Stacey, J.C.V, Briggs, J.A.G. 登録日 2023-02-16 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (2.6 Å) 主引用文献 Two structural switches in HIV-1 capsid regulate capsid curvature and host factor binding. Proc.Natl.Acad.Sci.USA, 120, 2023
8CKV	HIV-1 mature capsid hexamer from CA-IP6 CLPs 分子名称: Gag polyprotein 著者 Stacey, J.C.V, Briggs, J.A.G. 登録日 2023-02-16 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Two structural switches in HIV-1 capsid regulate capsid curvature and host factor binding. Proc.Natl.Acad.Sci.USA, 120, 2023
8CL3	HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to Sec24C peptide. 分子名称: Gag polyprotein, Protein transport protein Sec24C 著者 Stacey, J.C.V, Briggs, J.A.G. 登録日 2023-02-16 公開日 2023-04-26 実験手法 ELECTRON MICROSCOPY (3.14 Å) 主引用文献 Two structural switches in HIV-1 capsid regulate capsid curvature and host factor binding. Proc.Natl.Acad.Sci.USA, 120, 2023

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