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PDB: 1515 件

2MJ5
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BU of 2mj5 by Molmil
Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin
分子名称: Next to BRCA1 gene 1 protein, Polyubiquitin-C
著者Walinda, E, Morimoto, D, Sugase, K, Komatsu, M, Tochio, H, Shirakawa, M.
登録日2013-12-25
公開日2014-04-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin.
J.Biol.Chem., 289, 2014
2M17
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BU of 2m17 by Molmil
ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1)
分子名称: Ubiquitin-like domain-containing CTD phosphatase 1
著者Lee, W, Yun, J.
登録日2012-11-19
公開日2013-06-05
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Solution Structure and Rpn1 Interaction of the UBL Domain of Human RNA Polymerase II C-Terminal Domain Phosphatase.
Plos One, 8, 2013
2MRE
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BU of 2mre by Molmil
NMR structure of the Rad18-UBZ/ubiquitin complex
分子名称: E3 ubiquitin-protein ligase RAD18, Polyubiquitin-C, ZINC ION
著者Rizzo, A.A, Salerno, P.E, Bezsonova, I, Korzhnev, D.M.
登録日2014-07-03
公開日2014-10-22
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献NMR Structure of the Human Rad18 Zinc Finger in Complex with Ubiquitin Defines a Class of UBZ Domains in Proteins Linked to the DNA Damage Response.
Biochemistry, 53, 2014
2MOR
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BU of 2mor by Molmil
A tensor-free method for the structural and dynamical refinement of proteins using residual dipolar couplings
分子名称: Ubiquitin
著者Camilloni, C, Vendruscolo, M.
登録日2014-04-29
公開日2014-06-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A Tensor-Free Method for the Structural and Dynamical Refinement of Proteins using Residual Dipolar Couplings.
J.Phys.Chem.B, 119, 2015
2N4F
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BU of 2n4f by Molmil
EC-NMR Structure of Arabidopsis thaliana At2g32350 Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target AR3433A
分子名称: uncharacterized protein AR3433A
著者Tang, Y, Huang, Y.J, Hopf, T.A, Sander, C, Marks, D, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2015-06-17
公開日2015-07-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Protein structure determination by combining sparse NMR data with evolutionary couplings.
Nat.Methods, 12, 2015
2JF5
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BU of 2jf5 by Molmil
crystal structure of Lys63-linked di-ubiquitin
分子名称: CADMIUM ION, CHLORIDE ION, COBALT (II) ION, ...
著者Komander, D, Odenwaelder, P, Barford, D.
登録日2007-01-26
公開日2008-02-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains.
Embo Rep., 10, 2009
2N7K
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BU of 2n7k by Molmil
Unveiling the structural determinants of KIAA0323 binding preference for NEDD8
分子名称: NEDD8, Protein KHNYN
著者Santonico, E, Nepravishta, R, Mattioni, A, Valentini, E, Mandaliti, W, Procopio, R, Iannuccelli, M, Castagnoli, L, Polo, S, Paci, M, Cesareni, G.
登録日2015-09-14
公開日2016-09-14
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Unveiling the structural determinants of KIAA0323 binding preference for NEDD8
To be Published
2N13
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BU of 2n13 by Molmil
Complex structure of MyUb (1080-1122) of human Myosin VI with K63-diUb
分子名称: Ubiquitin, Unconventional myosin-VI
著者He, F, Walters, K.
登録日2015-03-20
公開日2016-03-09
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Myosin VI Contains a Compact Structural Motif that Binds to Ubiquitin Chains.
Cell Rep, 14, 2016
2MSG
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BU of 2msg by Molmil
Solid-state NMR structure of ubiquitin
分子名称: Ubiquitin
著者Lakomek, N, Habenstein, B, Loquet, A, Shi, C, Giller, K, Wolff, S, Becker, S, Fasshuber, H, Lange, A.
登録日2014-08-04
公開日2015-02-18
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献Structural heterogeneity in microcrystalline ubiquitin studied by solid-state NMR.
Protein Sci., 24, 2015
2MQJ
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BU of 2mqj by Molmil
Solution structure of ubiquitin-like protein from Caldiarchaeum subterraneum
分子名称: Ubiquitin-like protein
著者Ye, K.
登録日2014-06-22
公開日2015-06-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of ubiquitin-like protein from Caldiarchaeum subterraneum
To be Published
2N7D
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BU of 2n7d by Molmil
Solution structure of the UBL domain of human Ddi2
分子名称: Protein DDI1 homolog 2
著者Siva, M, Grantz Saskova, K, Veverka, V.
登録日2015-09-08
公開日2016-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog.
Sci Rep, 6, 2016
2KAN
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BU of 2kan by Molmil
Solution NMR structure of ubiquitin-like domain of Arabidopsis thaliana protein At2g32350. Northeast Structural Genomics Consortium target AR3433A
分子名称: uncharacterized protein ar3433a
著者Eletsky, A, Mills, J.L, Sukumaran, D, Hua, J, Shastry, R, Jiang, M, Ciccosanti, C, Xiao, R, Liu, J, Everret, J.K, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2008-11-11
公開日2008-11-25
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution NMR structure of ubiquitin-like domain of Arabidopsis thaliana protein At2g32350.
To be Published
2NBD
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BU of 2nbd by Molmil
Solution structure of V26A mutant of Ubiquitin at pH 6.0
分子名称: entity
著者Surana, P, Das, R.
登録日2016-02-04
公開日2016-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR
Protein Sci., 25, 2016
2NBU
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BU of 2nbu by Molmil
Solution structure of the Rad23 ubiquitin-like (UBL) domain
分子名称: UV excision repair protein RAD23
著者Chen, X, Walters, K.J.
登録日2016-03-12
公開日2016-07-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
2NBE
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BU of 2nbe by Molmil
Solution structure of V26A mutant of Ubiquitin at pH 2.0
分子名称: entity
著者Surana, P, Das, R.
登録日2016-02-04
公開日2016-05-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Observing a late folding intermediate of Ubiquitin at atomic resolution by NMR
Protein Sci., 25, 2016
2MWS
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BU of 2mws by Molmil
Structure of the complex of ubiquitin and the ubiquitin-like (UBL) domain of Ddi1
分子名称: DNA damage-inducible protein 1, Ubiquitin
著者Fushman, D, Nowicka, U, Walker, O.
登録日2014-11-23
公開日2015-03-25
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
2OJR
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BU of 2ojr by Molmil
Structure of ubiquitin solved by SAD using the Lanthanide-Binding Tag
分子名称: TERBIUM(III) ION, Ubiquitin
著者Silvaggi, N.R, Allen, K.N.
登録日2007-01-13
公開日2007-06-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Double-Lanthanide-Binding Tags for Macromolecular Crystallographic Structure Determination.
J.Am.Chem.Soc., 129, 2007
2O6V
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BU of 2o6v by Molmil
Crystal structure and solution NMR studies of Lys48-linked tetraubiquitin at neutral pH
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION, Ubiquitin
著者Eddins, M.J, Wolberger, C.
登録日2006-12-08
公開日2007-02-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure and Solution NMR Studies of Lys48-linked Tetraubiquitin at Neutral pH
J.Mol.Biol., 367, 2007
2L3Z
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BU of 2l3z by Molmil
Proton-Detected 4D DREAM Solid-State NMR Structure of Ubiquitin
分子名称: Ubiquitin
著者Huber, M, Hiller, S, Schanda, P, Ernst, M, Bockmann, A, Verel, R, Meier, B.H.
登録日2010-09-27
公開日2011-02-16
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献A Proton-Detected 4D Solid-State NMR Experiment for Protein Structure Determination.
Chemphyschem, 12, 2011
2LD9
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BU of 2ld9 by Molmil
Backbone Structure of Ubiquitin determined using Backbone amide NOEs and Backbone N-H and N-C RDCs
分子名称: Ubiquitin
著者Kumar, D, Hosur, R.
登録日2011-05-18
公開日2011-06-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献AUTOBA: Automation of Backbone Assignment from HN(C)N Suite of Experiments
To be Published
2NR2
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BU of 2nr2 by Molmil
The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native states ensembles of proteins
分子名称: Ubiquitin
著者Richter, B, Gsponer, J, Varnai, P, Salvatella, X, Vendruscolo, M.
登録日2006-11-01
公開日2007-05-08
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native state ensembles of proteins
J.Biomol.Nmr, 37, 2007
2MI8
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BU of 2mi8 by Molmil
Solution structure of lysine-free (K0) ubiquitin
分子名称: Ubiquitin
著者Huang, T, Li, J.R, Byrd, A.R.
登録日2013-12-09
公開日2014-04-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of lysine-free (K0) ubiquitin.
Protein Sci., 23, 2014
2KO3
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BU of 2ko3 by Molmil
Nedd8 solution structure
分子名称: NEDD8
著者Choi, Y.S, Jeon, Y.H, Cheong, C.
登録日2009-09-09
公開日2009-11-03
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献60th residues of ubiquitin and Nedd8 are located out of E2-binding surfaces, but are important for K48 ubiquitin-linkage.
Febs Lett., 583, 2009
2KLC
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BU of 2klc by Molmil
NMR solution structure of human ubiquitin-like domain of ubiquilin 1, Northeast Structural Genomics Consortium (NESG) target HT5A
分子名称: Ubiquilin-1
著者Doherty, R.S, Dhe-Paganon, S, Fares, C, Lemak, S, Gutmanas, A, Garcia, M, Yee, A, Montelione, G.T, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC), Ontario Centre for Structural Proteomics (OCSP)
登録日2009-06-30
公開日2009-07-14
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of ubiquitin-like domain of ubiquilin 1
To be Published
2N2K
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BU of 2n2k by Molmil
Ensemble structure of the closed state of Lys63-linked diubiquitin in the absence of a ligand
分子名称: S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ubiquitin
著者Liu, Z, Gong, Z, Tang, C.
登録日2015-05-10
公開日2015-07-08
最終更新日2015-09-23
実験手法SOLUTION NMR
主引用文献Lys63-linked ubiquitin chain adopts multiple conformational states for specific target recognition.
Elife, 4, 2015

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件を2024-07-31に公開中

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