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5VFT
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BU of 5vft by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-09
Release date:2018-07-18
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
2ZOQ
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BU of 2zoq by Molmil
Structural dissection of human mitogen-activated kinase ERK1
Descriptor: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL, Mitogen-activated protein kinase 3, SODIUM ION, ...
Authors:Kinoshita, T, Tada, T, Nakae, S, Yoshida, I.
Deposit date:2008-06-01
Release date:2009-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Crystal structure of human mono-phosphorylated ERK1 at Tyr204
Biochem.Biophys.Res.Commun., 377, 2008
5VFQ
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BU of 5vfq by Molmil
Nucleotide-driven Triple-state Remodeling of the AAA-ATPase Channel in the Activated Human 26S Proteasome
Descriptor: 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, 26S proteasome non-ATPase regulatory subunit 12, ...
Authors:Zhu, Y, Wang, W.L, Yu, D, Ouyang, Q, Lu, Y, Mao, Y.
Deposit date:2017-04-09
Release date:2018-07-18
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Nat Commun, 9, 2018
2ZFZ
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BU of 2zfz by Molmil
Crystal structure of the C-terminal domain hexamer of ArgR from Mycobacterium tuberculosis in complex with arginine
Descriptor: ARGININE, Arginine repressor, GUANIDINE
Authors:Cherney, L.T, Cherney, M.M, Garen, C.R, Lu, G.J, James, M.N.G, TB Structural Genomics Consortium (TBSGC)
Deposit date:2008-01-16
Release date:2008-02-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the C-terminal domain of the arginine repressor protein from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 64, 2008
4LNF
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BU of 4lnf by Molmil
B. subtilis glutamine synthetase structures reveal large active site conformational changes and basis for isoenzyme specific regulation: structure of GS-Q
Descriptor: GLUTAMINE, Glutamine synthetase, MAGNESIUM ION, ...
Authors:Schumacher, M.A, Chinnam, N, Tonthat, N, Fisher, S, Wray, L.
Deposit date:2013-07-11
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.949 Å)
Cite:Structures of the Bacillus subtilis Glutamine Synthetase Dodecamer Reveal Large Intersubunit Catalytic Conformational Changes Linked to a Unique Feedback Inhibition Mechanism.
J.Biol.Chem., 288, 2013
8C2P
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BU of 8c2p by Molmil
FMDV 3D polymerase in complex with 3B3
Descriptor: Protein 3B-3, RNA-directed RNA polymerase 3D-POL
Authors:Ferrer-Orta, C, Veraguer, N.
Deposit date:2022-12-22
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Dual role of the foot-and-mouth disease virus 3B1 protein in the replication complex: As protein primer and as an essential component to recruit 3Dpol to membranes.
Plos Pathog., 19, 2023
8C1N
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BU of 8c1n by Molmil
FMDV 3D polymerase in complex with 3B1 protein solved in P212121 space group
Descriptor: ACETATE ION, GLYCEROL, Protein 3B-1, ...
Authors:Ferrer-Orta, C, Veraguer, N.
Deposit date:2022-12-20
Release date:2023-04-26
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dual role of the foot-and-mouth disease virus 3B1 protein in the replication complex: As protein primer and as an essential component to recruit 3Dpol to membranes.
Plos Pathog., 19, 2023
6CTC
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BU of 6ctc by Molmil
Crystal structure of human transferrin bound to Triferic FPC iron pyrophosphate
Descriptor: CARBONATE ION, FE (III) ION, PYROPHOSPHATE 2-, ...
Authors:Edwards, T.E, Pratt, R.
Deposit date:2018-03-22
Release date:2018-10-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Ferric pyrophosphate citrate: interactions with transferrin.
Biometals, 31, 2018
1FX7
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BU of 1fx7 by Molmil
CRYSTAL STRUCTURE OF THE IRON-DEPENDENT REGULATOR (IDER) FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor: COBALT (II) ION, IRON-DEPENDENT REPRESSOR IDER, SULFATE ION
Authors:Feese, M.D, Ingason, B.P, Goranson-Siekierke, J, Holmes, R.K, Hol, W.J.G.
Deposit date:2000-09-25
Release date:2001-03-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the iron-dependent regulator from Mycobacterium tuberculosis at 2.0-A resolution reveals the Src homology domain 3-like fold and metal binding function of the third domain.
J.Biol.Chem., 276, 2001
8CAH
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BU of 8cah by Molmil
Cryo-EM structure of native Otu2-bound ubiquitinated 43S pre-initiation complex
Descriptor: 18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Ikeuchi, K, Buschauer, R, Cheng, J, Berninghausen, O, Becker, T, Beckmann, R.
Deposit date:2023-01-24
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2.
Nat Commun, 14, 2023
8C4V
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BU of 8c4v by Molmil
Hantaan virus polymerase in replication elongation state
Descriptor: MAGNESIUM ION, RNA (5'-R(P*AP*CP*UP*AP*CP*UP*A)-3'), RNA (5'-R(P*AP*GP*GP*AP*GP*UP*AP*UP*CP*CP*AP*CP*CP*GP*CP*AP*AP*GP*A)-3'), ...
Authors:Durieux trouilleton, Q, Arragain, B, Malet, H.
Deposit date:2023-01-04
Release date:2023-06-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structures of active Hantaan virus polymerase uncover the mechanisms of Hantaviridae genome replication.
Nat Commun, 14, 2023
8C4T
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BU of 8c4t by Molmil
Hantaan virus polymerase bound to its 5' viral RNA
Descriptor: MAGNESIUM ION, RNA (5'-R(P*UP*AP*GP*UP*AP*GP*UP*AP*GP*AP*CP*A)-3'), RNA-directed RNA polymerase L
Authors:Durieux trouilleton, Q, Arragain, B, Malet, H.
Deposit date:2023-01-04
Release date:2023-06-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structures of active Hantaan virus polymerase uncover the mechanisms of Hantaviridae genome replication.
Nat Commun, 14, 2023
8C4U
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BU of 8c4u by Molmil
Hantaan virus polymerase in replication pre-initiation state
Descriptor: MAGNESIUM ION, RNA (5'-R(P*UP*AP*GP*GP*AP*GP*UP*AP*UP*CP*CP*AP*CP*CP*GP*CP*AP*AP*GP*A)-3'), RNA (5'-R(P*UP*UP*UP*UP*GP*CP*GP*GP*AP*GP*UP*AP*CP*UP*AP*CP*UP*A)-3'), ...
Authors:Durieux trouilleton, Q, Arragain, B, Malet, H.
Deposit date:2023-01-04
Release date:2023-06-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structures of active Hantaan virus polymerase uncover the mechanisms of Hantaviridae genome replication.
Nat Commun, 14, 2023
8C4S
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BU of 8c4s by Molmil
Apo Hantaan virus polymerase core
Descriptor: RNA-directed RNA polymerase L
Authors:Durieux trouilleton, Q, Arragain, B, Malet, H.
Deposit date:2023-01-04
Release date:2023-06-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Structures of active Hantaan virus polymerase uncover the mechanisms of Hantaviridae genome replication.
Nat Commun, 14, 2023
8CI5
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BU of 8ci5 by Molmil
Structure of the SNV L protein bound to 5' RNA
Descriptor: RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*GP*AP*CP*U)-3'), RNA-directed RNA polymerase L
Authors:Meier, K, Thorkelsson, S.R, Durieux Trouilleton, Q, Vogel, D, Yu, D, Kosinski, J, Cusack, S, Malet, H, Grunewald, K, Quemin, E.R.J, Rosenthal, M.
Deposit date:2023-02-08
Release date:2023-07-19
Last modified:2023-08-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural and functional characterization of the Sin Nombre virus L protein.
Plos Pathog., 19, 2023
8CAZ
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BU of 8caz by Molmil
empty 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ...
Authors:Paternoga, H, Beckert, B, Wilson, D.N.
Deposit date:2023-01-24
Release date:2023-07-26
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CGI
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BU of 8cgi by Molmil
Pentacycline TP038 bound to the 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S7, Large ribosomal subunit protein bL31A, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Novacek, J, Wilson, D.N.
Deposit date:2023-02-04
Release date:2023-07-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (1.89 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8T12
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BU of 8t12 by Molmil
Cryo-EM structure of DENV2 NS5 in complex with human STAT2 with the N-terminal domain of STAT2 ordered.
Descriptor: Non-structural protein 5, Signal transducer and activator of transcription 2, ZINC ION
Authors:Biswal, M, Lu, J, Song, J.
Deposit date:2023-06-01
Release date:2024-01-17
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:A conformational selection mechanism of flavivirus NS5 for species-specific STAT2 inhibition.
Commun Biol, 7, 2024
8CF1
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BU of 8cf1 by Molmil
Tetracycline bound to the 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Beckert, B, Wilson, D.N.
Deposit date:2023-02-02
Release date:2023-07-26
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (1.82 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8T13
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BU of 8t13 by Molmil
Cryo-EM structure of DENV2 NS5 in complex with human STAT2 with the N-terminal domain of STAT2 disordered
Descriptor: Non-structural protein 5, Signal transducer and activator of transcription 2, ZINC ION
Authors:Biswal, M, Lu, J, Song, J.
Deposit date:2023-06-01
Release date:2024-01-17
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:A conformational selection mechanism of flavivirus NS5 for species-specific STAT2 inhibition.
Commun Biol, 7, 2024
8CA7
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BU of 8ca7 by Molmil
Omadacycline and spectinomycin bound to the 30S ribosomal subunit head
Descriptor: 16S rRNA, 30S ribosomal protein S7, MAGNESIUM ION, ...
Authors:Paternoga, H, Crowe-McAuliffe, C, Wilson, D.N.
Deposit date:2023-01-24
Release date:2023-08-02
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (2.06 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8CF8
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BU of 8cf8 by Molmil
Eravacycline bound to the 30S head
Descriptor: 16S rRNA, 30S ribosomal protein S2, 30S ribosomal protein S7, ...
Authors:Paternoga, H, Koller, T.O, Beckert, B, Wilson, D.N.
Deposit date:2023-02-03
Release date:2023-08-02
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structural conservation of antibiotic interaction with ribosomes.
Nat.Struct.Mol.Biol., 30, 2023
8FOW
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BU of 8fow by Molmil
Ternary complex of CDK2 with small molecule ligands TW8672 and Dinaciclib
Descriptor: 1,2-ETHANEDIOL, 2-{[2-(1H-indol-3-yl)ethyl]amino}-5-nitrobenzoic acid, 3-[({3-ethyl-5-[(2S)-2-(2-hydroxyethyl)piperidin-1-yl]pyrazolo[1,5-a]pyrimidin-7-yl}amino)methyl]-1-hydroxypyridinium, ...
Authors:Schonbrunn, E, Sun, L.
Deposit date:2023-01-03
Release date:2023-05-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Development of allosteric and selective CDK2 inhibitors for contraception with negative cooperativity to cyclin binding.
Nat Commun, 14, 2023
4MO1
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BU of 4mo1 by Molmil
Crystal structure of antitermination protein Q from bacteriophage lambda. Northeast Structural Genomics Consortium target OR18A.
Descriptor: Antitermination protein Q, BROMIDE ION, CHLORIDE ION, ...
Authors:Vorobiev, S, Su, M, Nickels, B, Seetharaman, J, Sahdev, S, Xiao, R, Kogan, S, Maglaqui, M, Wang, D, Everett, J.K, Acton, T.B, Ebright, R.H, Montelione, G.T, Hunt, J, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-09-11
Release date:2013-09-25
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Crystal structure of antitermination protein Q from bacteriophage lambda.
To be Published
8BZS
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BU of 8bzs by Molmil
The crystal structure of glycogen phosphorylase in complex with baicalein
Descriptor: 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one, Glycogen phosphorylase, muscle form, ...
Authors:Koulas, S.M, Mathomes, R, Hayes, J.M, Leonidas, D.D.
Deposit date:2022-12-15
Release date:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Multidisciplinary docking, kinetics and X-ray crystallography studies of baicalein acting as a glycogen phosphorylase inhibitor and determination of its' potential against glioblastoma in cellular models.
Chem.Biol.Interact., 382, 2023

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PDB entries from 2024-09-11

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