PDB: 98041 resultsInfo pagesStatus searchChemie searchBIRD

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1NEE	Structure of archaeal translation factor aIF2beta from Methanobacterium thermoautrophicum Descriptor: Probable translation initiation factor 2 beta subunit, ZINC ION Authors: Gutierrez, P, Trempe, J.F, Siddiqui, N, Arrowsmith, C, Gehring, K. Deposit date: 2002-12-11 Release date: 2004-03-09 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structure of the archaeal translation initiation factor aIF2beta from Methanobacterium thermoautotrophicum: Implications for translation initiation. Protein Sci., 13, 2004
1Z8G	Crystal structure of the extracellular region of the transmembrane serine protease hepsin with covalently bound preferred substrate. Descriptor: ACE-LYS-GLN-LEU-ARG-Chloromethylketone, Serine protease hepsin Authors: Herter, S, Piper, D.E, Aaron, W, Gabriele, T, Cutler, G, Cao, P, Bhatt, A.S, Choe, Y, Craik, C.S, Walker, N, Meininger, D, Hoey, T, Austin, R.J. Deposit date: 2005-03-30 Release date: 2005-05-03 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Hepatocyte growth factor is a preferred in vitro substrate for human hepsin, a membrane-anchored serine protease implicated in prostate and ovarian cancers Biochem.J., 390, 2005
1DPI	STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP Descriptor: DNA POLYMERASE I KLENOW FRAGMENT, ZINC ION Authors: Beese, L, Ollis, D, Steitz, T. Deposit date: 1987-08-11 Release date: 1987-10-16 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP. Nature, 313, 1985
1EHX	NMR SOLUTION STRUCTURE OF THE LAST UNKNOWN MODULE OF THE CELLULOSOMAL SCAFFOLDIN PROTEIN CIPC OF CLOSTRIDUM CELLULOLYTICUM Descriptor: SCAFFOLDIN PROTEIN Authors: Mosbah, A, Belaich, A, Bornet, O, Belaich, J.P, Henrissat, B, Darbon, H. Deposit date: 2000-02-23 Release date: 2000-11-17 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of the module X2 1 of unknown function of the cellulosomal scaffolding protein CipC of Clostridium cellulolyticum. J.Mol.Biol., 304, 2000
2BGN	HIV-1 Tat protein derived N-terminal nonapeptide Trp2-Tat(1-9) bound to the active site of Dipeptidyl peptidase IV (CD26) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Weihofen, W.A, Liu, J, Reutter, W, Saenger, W, Fan, H. Deposit date: 2005-01-03 Release date: 2005-01-27 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Crystal Structures of HIV-1 Tat-Derived Nonapeptides Tat-(1-9) and Trp2-Tat-(1-9) Bound to the Active Site of Dipeptidyl-Peptidase Iv (Cd26) J.Biol.Chem., 280, 2005
3QHW	Structure of a pCDK2/CyclinA transition-state mimic Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, CDK2 substrate peptide: PKTPKKAKKL, ... Authors: Young, M.A, Jacobsen, D.M, Bao, Z.Q. Deposit date: 2011-01-26 Release date: 2011-05-25 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Briefly Bound to Activate: Transient Binding of a Second Catalytic Magnesium Activates the Structure and Dynamics of CDK2 Kinase for Catalysis. Structure, 19, 2011
8PNT	Structure of the human nuclear cap-binding complex bound to PHAX and m7G-capped RNA Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2, ... Authors: Dubiez, E, Pellegrini, E, Foucher, A.E, Cusack, S, Kadlec, J. Deposit date: 2023-07-01 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (3.46 Å) Cite: Structural basis for competitive binding of productive and degradative co-transcriptional effectors to the nuclear cap-binding complex. Cell Rep, 43, 2024
8PMP	Structure of the human nuclear cap-binding complex bound to ARS2[147-871] and m7GTP Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2, ... Authors: Dubiez, E, Pellegrini, E, Foucher, A.E, Cusack, S, Kadlec, J. Deposit date: 2023-06-29 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (3.43 Å) Cite: Structural basis for competitive binding of productive and degradative co-transcriptional effectors to the nuclear cap-binding complex. Cell Rep, 43, 2024
1OXK	Complex between YPD1 and SLN1 response regulator domain in space group P3(2) Descriptor: SLN1, SULFATE ION, Ypd1p Authors: Xu, Q, Porter, S.W, West, A.H. Deposit date: 2003-04-02 Release date: 2003-12-16 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.1 Å) Cite: The Yeast YPD1/SLN1 Complex. Insights into Molecular Recognition in Two-Component Signaling Systems. Structure, 11, 2003
1WQJ	Structural Basis for the Regulation of Insulin-Like Growth Factors (IGFs) by IGF Binding Proteins (IGFBPs) Descriptor: Insulin-like growth factor IB, Insulin-like growth factor binding protein 4 Authors: Siwanowicz, I, Popowicz, G.M, Wisniewska, M, Huber, R, Kuenkele, K.P, Lang, K, Engh, R.A, Holak, T.A. Deposit date: 2004-09-29 Release date: 2005-03-01 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for the regulation of insulin-like growth factors by IGF binding proteins Structure, 13, 2005
2CY3	CRYSTAL STRUCTURE OF CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS NORWAY AT 1.7 ANGSTROMS RESOLUTION Descriptor: CYTOCHROME C3, HEME C Authors: Czjzek, M, Payan, F, Haser, R. Deposit date: 1994-07-01 Release date: 1994-10-15 Last modified: 2021-03-03 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of cytochrome c3 from Desulfovibrio desulfuricans Norway at 1.7 A resolution. J.Mol.Biol., 243, 1994
4DYZ	Crystal Structure of the apo form of Human H-Ferritin variant MIC1 Descriptor: CALCIUM ION, COPPER (II) ION, Ferritin heavy chain Authors: Tezcan, F.A, Huard, D.J.E. Deposit date: 2012-02-29 Release date: 2013-01-23 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Re-engineering protein interfaces yields copper-inducible ferritin cage assembly. Nat.Chem.Biol., 9, 2013
4H76	Crystal structure of the catalytic domain of Human MMP12 in complex with a broad spectrum hydroxamate inhibitor Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Stura, E.A, Vera, L, Cassar-Lajeunesse, E, Nuti, E, Dive, V, Rossello, A. Deposit date: 2012-09-20 Release date: 2013-04-24 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystallization of bi-functional ligand protein complexes. J.Struct.Biol., 182, 2013
3T82	Human Carbonic Anhydrase II in complex with Acetylated Carbohydrate Sulfamates Descriptor: 3,4-di-O-acetyl-6-O-sulfamoyl-alpha-D-glucopyranose, Carbonic anhydrase 2, ZINC ION Authors: Hofmann, A, Wang, C.K. Deposit date: 2011-08-01 Release date: 2011-10-19 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.002 Å) Cite: Promiscuity of carbonic anhydrase II. Unexpected ester hydrolysis of carbohydrate-based sulfamate inhibitors. J.Am.Chem.Soc., 133, 2011
1PBE	CRYSTAL STRUCTURE OF THE P-HYDROXYBENZOATE HYDROXYLASE-SUBSTRATE COMPLEX REFINED AT 1.9 ANGSTROMS RESOLUTION. ANALYSIS OF THE ENZYME-SUBSTRATE AND ENZYME-PRODUCT COMPLEXES Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, P-HYDROXYBENZOATE HYDROXYLASE, P-HYDROXYBENZOIC ACID Authors: Schreuder, H.A, Hol, W.G.J, Drenth, J. Deposit date: 1994-07-06 Release date: 1994-09-30 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of the p-hydroxybenzoate hydroxylase-substrate complex refined at 1.9 A resolution. Analysis of the enzyme-substrate and enzyme-product complexes. J.Mol.Biol., 208, 1989
4DZ0	Crystal structure of the Cu-adduct of human H-Ferritin variant MIC1 labeled with a dansyl fluorophore Descriptor: 5-(1-SULFONAPHTHYL)-ACETYLAMINO-ETHYLAMINE, CALCIUM ION, COPPER (II) ION, ... Authors: Tezcan, F.A, Huard, D.J.E. Deposit date: 2012-02-29 Release date: 2013-01-23 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Re-engineering protein interfaces yields copper-inducible ferritin cage assembly. Nat.Chem.Biol., 9, 2013
1PEG	Structural basis for the product specificity of histone lysine methyltransferases Descriptor: Histone H3, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION, ... Authors: Zhang, X, Yang, Z, Khan, S.I, Horton, J.R, Tamaru, H, Selker, E.U, Cheng, X. Deposit date: 2003-05-21 Release date: 2003-08-05 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.59 Å) Cite: Structural basis for the product specificity of histone lysine methyltransferases Mol.Cell, 12, 2003
4HIF	Ultrahigh-resolution crystal structure of Z-DNA in complex with Zn2+ ions Descriptor: CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), SPERMINE (FULLY PROTONATED FORM), ... Authors: Drozdzal, P, Gilski, M, Kierzek, R, Lomozik, L, Jaskolski, M. Deposit date: 2012-10-11 Release date: 2013-06-05 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (0.85 Å) Cite: Ultrahigh-resolution crystal structures of Z-DNA in complex with Mn(2+) and Zn(2+) ions. Acta Crystallogr.,Sect.D, 69, 2013
4E5Z	Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair Descriptor: AP24 DNA complementary strand, AP24 DNA strand, DNA damage-binding protein 1, ... Authors: Yeh, J.I, Du, S. Deposit date: 2012-03-15 Release date: 2012-08-22 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.22 Å) Cite: Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair. Proc.Natl.Acad.Sci.USA, 109, 2012
1WER	RAS-GTPASE-ACTIVATING DOMAIN OF HUMAN P120GAP Descriptor: P120GAP Authors: Scheffzek, K, Lautwein, A, Kabsch, W, Ahmadian, M.R, Wittinghofer, A. Deposit date: 1996-11-20 Release date: 1997-12-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of the GTPase-activating domain of human p120GAP and implications for the interaction with Ras. Nature, 384, 1996
1PHP	STRUCTURE OF THE ADP COMPLEX OF THE 3-PHOSPHOGLYCERATE KINASE FROM BACILLUS STEAROTHERMOPHILUS AT 1.65 ANGSTROMS Descriptor: 3-PHOSPHOGLYCERATE KINASE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION Authors: Davies, G.J, Watson, H.C. Deposit date: 1994-04-12 Release date: 1994-06-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structure of the ADP complex of the 3-phosphoglycerate kinase from Bacillus stearothermophilus at 1.65 A. Acta Crystallogr.,Sect.D, 50, 1994
5IWG	HDAC2 WITH LIGAND BRD4884 Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ... Authors: Steinbacher, S. Deposit date: 2016-03-22 Release date: 2016-08-31 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.66 Å) Cite: Kinetic and structural insights into the binding of histone deacetylase 1 and 2 (HDAC1, 2) inhibitors. Bioorg.Med.Chem., 24, 2016
1PJU	Unbound form of Tomato Inhibitor-II Descriptor: SULFATE ION, Wound-induced proteinase inhibitor II Authors: Barrette-Ng, I.H, Ng, K.K.-S, Cherney, M.M, Pearce, G, Ghani, U, Ryan, C.A, James, M.N.G. Deposit date: 2003-06-03 Release date: 2003-09-16 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Unbound form of tomato inhibitor-II reveals interdomain flexibility and conformational variability in the reactive site loops J.Biol.Chem., 278, 2003
1PLC	ACCURACY AND PRECISION IN PROTEIN CRYSTAL STRUCTURE ANALYSIS: RESTRAINED LEAST-SQUARES REFINEMENT OF THE CRYSTAL STRUCTURE OF POPLAR PLASTOCYANIN AT 1.33 ANGSTROMS RESOLUTION Descriptor: COPPER (II) ION, PLASTOCYANIN Authors: Guss, J.M, Freeman, H.C. Deposit date: 1992-03-11 Release date: 1993-10-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.33 Å) Cite: Accuracy and precision in protein structure analysis: restrained least-squares refinement of the structure of poplar plastocyanin at 1.33 A resolution. Acta Crystallogr.,Sect.B, 48, 1992
5IX0	HDAC2 WITH LIGAND BRD7232 Descriptor: (3-exo)-N-(4-amino-4'-fluoro[1,1'-biphenyl]-3-yl)-8-oxabicyclo[3.2.1]octane-3-carboxamide, 1,2-ETHANEDIOL, 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, ... Authors: Steinbacher, S. Deposit date: 2016-03-23 Release date: 2016-08-31 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.72 Å) Cite: Kinetic and structural insights into the binding of histone deacetylase 1 and 2 (HDAC1, 2) inhibitors. Bioorg.Med.Chem., 24, 2016

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