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8G1S
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BU of 8g1s by Molmil
Cryo-EM structure of 3DVA component 1 of Escherichia coli que-PEC (paused elongation complex) RNA Polymerase minus preQ1 ligand
Descriptor: DNA (31-MER), DNA (39-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Porta, J.C, Chauvier, A, Deb, I, Ellinger, E, Frank, A.T, Meze, K, Ohi, M.D, Walter, N.G.
Deposit date:2023-02-02
Release date:2023-06-21
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural basis for control of bacterial RNA polymerase pausing by a riboswitch and its ligand.
Nat.Struct.Mol.Biol., 30, 2023
8AO1
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BU of 8ao1 by Molmil
solution structure of nanoFAST fluorogen-activating protein in the apo state
Descriptor: nanoFAST
Authors:Lushpa, V.A, Goncharuk, M.V, Goncharuk, S.A, Baranov, M.S, Mineev, K.S.
Deposit date:2022-08-08
Release date:2022-11-23
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Spatial Structure of NanoFAST in the Apo State and in Complex with its Fluorogen HBR-DOM2.
Int J Mol Sci, 23, 2022
8AO0
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BU of 8ao0 by Molmil
Solution structure of nanoFAST/HBR-DOM2 complex
Descriptor: (5~{Z})-5-[(2,5-dimethoxy-4-oxidanyl-phenyl)methylidene]-2-sulfanylidene-1,3-thiazolidin-4-one, Photoactive yellow protein
Authors:Lushpa, V.A, Goncharuk, M.V, Goncharuk, S.A, Baleeva, N.S, Baranov, M.S, Mineev, K.S.
Deposit date:2022-08-08
Release date:2022-11-23
Method:SOLUTION NMR
Cite:Spatial Structure of NanoFAST in the Apo State and in Complex with its Fluorogen HBR-DOM2.
Int J Mol Sci, 23, 2022
8G4D
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BU of 8g4d by Molmil
BceABS ATPgS tilted BceS
Descriptor: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:George, N.L, Orlando, B.J.
Deposit date:2023-02-09
Release date:2023-06-21
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Architecture of a complete Bce-type antimicrobial peptide resistance module.
Nat Commun, 14, 2023
8G4C
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BU of 8g4c by Molmil
BceABS ATPgS high res TM
Descriptor: Bacitracin export ATP-binding protein BceA, Bacitracin export permease protein BceB, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:George, N.L, Orlando, B.J.
Deposit date:2023-02-09
Release date:2023-06-21
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Architecture of a complete Bce-type antimicrobial peptide resistance module.
Nat Commun, 14, 2023
8V9U
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BU of 8v9u by Molmil
Solution NMR structure of human DNMT1 N-terminal alpha-helical domain
Descriptor: DNA (cytosine-5)-methyltransferase 1
Authors:Hu, Q, Botuyan, M.V, Mer, G.
Deposit date:2023-12-09
Release date:2024-02-28
Last modified:2024-06-05
Method:SOLUTION NMR
Cite:Identification of a conserved alpha-helical domain at the N terminus of human DNA methyltransferase 1.
J.Biol.Chem., 300, 2024
8GI8
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BU of 8gi8 by Molmil
Kalium channelrhodopsin 1 from Hyphochytrium catenoides (HcKCR1) embedded in peptidisc
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHOLESTEROL, Kalium Channelrhodopsin 1, ...
Authors:Morizumi, T, Kim, K, Li, H, Spudich, J.L, Ernst, O.P.
Deposit date:2023-03-13
Release date:2023-07-26
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.88 Å)
Cite:Structures of channelrhodopsin paralogs in peptidiscs explain their contrasting K + and Na + selectivities.
Nat Commun, 14, 2023
8GI9
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BU of 8gi9 by Molmil
Cation channelrhodopsin from Hyphochytrium catenoides (HcCCR) embedded in peptidisc
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHOLESTEROL, Cation Channelrhodopsin, ...
Authors:Morizumi, T, Kim, K, Li, H, Spudich, J.L, Ernst, O.P.
Deposit date:2023-03-13
Release date:2023-07-26
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Structures of channelrhodopsin paralogs in peptidiscs explain their contrasting K + and Na + selectivities.
Nat Commun, 14, 2023
7ZYX
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BU of 7zyx by Molmil
Dimeric i-motif from 2'Farabinocytidine-modified TC5
Descriptor: DNA (5'-D(*TP*(CFL)P*(CFL)P*(CFL)P*(CFL)P*(CFL))-3')
Authors:Garavis, M, El Khoury, R, Damha, M.J, Gonzalez, C.
Deposit date:2022-05-25
Release date:2023-03-01
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:i-Motif folding intermediates with zero-nucleotide loops are trapped by 2'-fluoroarabinocytidine via F···H and O···H hydrogen bonds.
Commun Chem, 6, 2023
8GKA
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BU of 8gka by Molmil
Human TRPV3 tetramer structure, closed conformation
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, SODIUM ION, Transient receptor potential cation channel subfamily V member 3
Authors:Lansky, S, Betancourt, J.M, Scheuring, S.
Deposit date:2023-03-17
Release date:2023-09-06
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:A pentameric TRPV3 channel with a dilated pore.
Nature, 621, 2023
8GKG
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BU of 8gkg by Molmil
Human TRPV3 pentamer structure
Descriptor: Transient receptor potential cation channel subfamily V member 3
Authors:Lansky, S, Betancourt, J.M, Scheuring, S.
Deposit date:2023-03-18
Release date:2023-09-06
Last modified:2023-09-20
Method:ELECTRON MICROSCOPY (4.38 Å)
Cite:A pentameric TRPV3 channel with a dilated pore.
Nature, 621, 2023
8VSX
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BU of 8vsx by Molmil
NMR Structure of GCAP5 R22A
Descriptor: Guanylyl cyclase-activating protein 1
Authors:Cudia, D.L, Ames, J.B.
Deposit date:2024-01-24
Release date:2024-05-08
Last modified:2024-06-05
Method:SOLUTION NMR
Cite:NMR Structure of Retinal Guanylate Cyclase Activating Protein 5 (GCAP5) with R22A Mutation That Abolishes Dimerization and Enhances Cyclase Activation.
Biochemistry, 63, 2024
8EOK
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BU of 8eok by Molmil
Structure of the C3bB proconvertase in complex with lufaxin and factor Xa
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Activated factor Xa heavy chain, Complement C3 beta chain, ...
Authors:Andersen, J.F, Lei, H.
Deposit date:2022-10-03
Release date:2023-08-30
Method:ELECTRON MICROSCOPY (3.53 Å)
Cite:A bispecific inhibitor of complement and coagulation blocks activation in complementopathy models via a novel mechanism.
Blood, 141, 2023
4N5M
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BU of 4n5m by Molmil
Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase from Ralstonia eutropha in complexed with acetoacetyl-CoA
Descriptor: ACETOACETYL-COENZYME A, Acetoacetyl-CoA reductase, GLYCEROL
Authors:Kim, J.-E, Kim, S, Kim, K.-J.
Deposit date:2013-10-10
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase PhaB from Ralstonia eutropha
Biochem.Biophys.Res.Commun., 443, 2014
8AJR
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BU of 8ajr by Molmil
The Solution Structure of the Triple Mutant Methyl-CpG-Binding Domain from MeCP2
Descriptor: Methyl-CpG-binding protein 2
Authors:Singh, H.
Deposit date:2022-07-28
Release date:2023-02-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Epigenetic CpG duplex marks probed by an evolved DNA reader via a well-tempered conformational plasticity.
Nucleic Acids Res., 51, 2023
8ALQ
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BU of 8alq by Molmil
The Solution Structure of the Triple Mutant Methyl-CpG-Binding Domain from MeCP2 that Binds to Asymmetrically Modified DNA
Descriptor: Methyl-CpG-binding protein 2
Authors:Singh, H.
Deposit date:2022-08-01
Release date:2023-02-22
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Epigenetic CpG duplex marks probed by an evolved DNA reader via a well-tempered conformational plasticity.
Nucleic Acids Res., 51, 2023
4N5L
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BU of 4n5l by Molmil
Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase from Ralstonia eutropha
Descriptor: Acetoacetyl-CoA reductase
Authors:Kim, J.-E, Kim, S, Kim, K.-J.
Deposit date:2013-10-10
Release date:2013-12-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of (R)-3-hydroxybutyryl-CoA dehydrogenase PhaB from Ralstonia eutropha
Biochem.Biophys.Res.Commun., 443, 2014
4ZCV
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BU of 4zcv by Molmil
Structure of calcium-bound regulatory domain of the human ATP-Mg/Pi carrier in the P212121 form
Descriptor: CALCIUM ION, Calcium-binding mitochondrial carrier protein SCaMC-1, GLYCEROL, ...
Authors:Harborne, S.P.D, Ruprecht, J.J, Kunji, E.R.S.
Deposit date:2015-04-16
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Calcium-induced conformational changes in the regulatory domain of the human mitochondrial ATP-Mg/Pi carrier.
Biochim.Biophys.Acta, 1847, 2015
7KIX
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BU of 7kix by Molmil
The structure of anti-CRISPR AcrIE2
Descriptor: Anti-CRISPR protein AcrIE2
Authors:Pawluk, A, Davidson, A.R, Maxwell, K.L.
Deposit date:2020-10-25
Release date:2021-05-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Anti-CRISPR AcrIE2 Binds the Type I-E CRISPR-Cas Complex But Does Not Block DNA Binding.
J.Mol.Biol., 433, 2021
4YCR
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BU of 4ycr by Molmil
Structure determination of an integral membrane protein at room temperature from crystals in situ
Descriptor: Tellurite resistance protein TehA homolog, octyl beta-D-glucopyranoside
Authors:Axford, D, Hu, N.J, Foadi, J, Choudhury, H.G, Iwata, S, Beis, K, Evans, G, Alguel, Y.
Deposit date:2015-02-20
Release date:2015-06-03
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure determination of an integral membrane protein at room temperature from crystals in situ.
Acta Crystallogr.,Sect.D, 71, 2015
8AIG
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BU of 8aig by Molmil
NMR structure of holo-acp
Descriptor: 4'-PHOSPHOPANTETHEINE, Hybrid non ribosomal peptide synthetase-polyketide synthase
Authors:Collin, S, Weissman, K.J, Chagot, B, Gruez, A.
Deposit date:2022-07-26
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:Decrypting the programming of beta-methylation in virginiamycin M biosynthesis.
Nat Commun, 14, 2023
8ALL
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BU of 8all by Molmil
NMR structure of holo-acp
Descriptor: 4'-PHOSPHOPANTETHEINE, Hybrid non ribosomal peptide synthetase-polyketide synthase
Authors:Collin, S, Weissman, K.J, Chagot, B, Gruez, A.
Deposit date:2022-08-01
Release date:2023-03-22
Last modified:2023-03-29
Method:SOLUTION NMR
Cite:Decrypting the programming of beta-methylation in virginiamycin M biosynthesis.
Nat Commun, 14, 2023
4N07
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BU of 4n07 by Molmil
Crystal structure of the GluA2 ligand-binding domain (S1S2J-L483Y-N754S) in complex with glutamate and BPAM-344 at 1.87 A resolution
Descriptor: 4-cyclopropyl-7-fluoro-3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide, ACETATE ION, CACODYLATE ION, ...
Authors:Noerholm, A.B, Frydenvang, K, Kastrup, J.S.
Deposit date:2013-10-01
Release date:2013-11-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Synthesis, pharmacological and structural characterization, and thermodynamic aspects of GluA2-positive allosteric modulators with a 3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide scaffold.
J.Med.Chem., 56, 2013
8AHK
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BU of 8ahk by Molmil
Solution NMR structure of AG41, a 41-amino acid insecticidal protein extracted from Medicago truncatula
Descriptor: AG41
Authors:Jouvensal, L, Loth, K.
Deposit date:2022-07-21
Release date:2023-05-31
Method:SOLUTION NMR
Cite:Residues of Legume AG41 Peptide Crucial to Its Bio-Insecticidal Activity.
Biomolecules, 13, 2023
6E3J
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BU of 6e3j by Molmil
Human Bfl-1 in complex with the Bfl-1-specific designed peptide srt.F10
Descriptor: Bcl-2-related protein A1, SULFATE ION, peptide srt.F10
Authors:Jenson, J.M, Keating, A.E.
Deposit date:2018-07-14
Release date:2018-10-17
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.482 Å)
Cite:Peptide design by optimization on a data-parameterized protein interaction landscape.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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PDB entries from 2024-09-04

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