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PDB: 5 results

7ZYX
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BU of 7zyx by Molmil
Dimeric i-motif from 2'Farabinocytidine-modified TC5
Descriptor: DNA (5'-D(*TP*(CFL)P*(CFL)P*(CFL)P*(CFL)P*(CFL))-3')
Authors:Garavis, M, El Khoury, R, Damha, M.J, Gonzalez, C.
Deposit date:2022-05-25
Release date:2023-03-01
Method:SOLUTION NMR
Cite:i-Motif folding intermediates with zero-nucleotide loops are trapped by 2'-fluoroarabinocytidine via F···H and O···H hydrogen bonds.
Commun Chem, 6, 2023
2MRZ
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BU of 2mrz by Molmil
Dimeric structure of the Human A-box
Descriptor: DNA (5'-D(P*TP*CP*CP*TP*TP*TP*TP*CP*CP*A)-3')
Authors:Garavis, M, Escaja, N, Gabelica, V, Villasante, A, Gonzalez, C.
Deposit date:2014-07-18
Release date:2015-06-03
Last modified:2015-07-15
Method:SOLUTION NMR
Cite:Centromeric Alpha-Satellite DNA Adopts Dimeric i-Motif Structures Capped by AT Hoogsteen Base Pairs.
Chemistry, 21, 2015
8PWR
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BU of 8pwr by Molmil
TINA-conjugated antiparallel DNA triplex
Descriptor: DNA (5'-D(*AP*GP*GP*AP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*TP*CP*CP*T)-3'), DNA (5'-D(*TP*GP*GP*TP*GP*(J32)P*GP*T)-3')
Authors:Garavis, M, Edwards, P.J.B, Serrano-Chacon, I, Doluca, O, Filichev, V.V, Gonzalez, C.
Deposit date:2023-07-21
Release date:2024-01-17
Last modified:2024-03-27
Method:SOLUTION NMR
Cite:Understanding intercalative modulation of G-rich sequence folding: solution structure of a TINA-conjugated antiparallel DNA triplex.
Nucleic Acids Res., 52, 2024
8OFC
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BU of 8ofc by Molmil
Structure of an i-motif domain with the cytosine analog 1,3-diaza-2-oxophenoxacione (tC) at neutral pH
Descriptor: DNA (5'-D(*CP*(YCO)P*GP*TP*TP*CP*(DNR)P*GP*TP*TP*TP*TP*TP*CP*CP*GP*TP*TP*CP*(DNR)P*GP*T)-3')
Authors:Mir, B, Serrano-Chacon, I, Terrazas, M, Gandioso, A, Garavis, M, Orozco, M, Escaja, N, Gonzalez, C.
Deposit date:2023-03-15
Release date:2024-02-07
Last modified:2024-04-24
Method:SOLUTION NMR
Cite:Site-specific incorporation of a fluorescent nucleobase analog enhances i-motif stability and allows monitoring of i-motif folding inside cells.
Nucleic Acids Res., 52, 2024
2LSX
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BU of 2lsx by Molmil
Solution structure of a mini i-motif
Descriptor: DNA (5'-D(P*TP*CP*GP*TP*TP*TP*CP*GP*TP*T)-3')
Authors:Escaja, N, Viladoms, J, Garavis, M, Villasante, A, Pedroso, E, Gonzalez, C.
Deposit date:2012-05-09
Release date:2012-10-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A minimal i-motif stabilized by minor groove G:T:G:T tetrads.
Nucleic Acids Res., 40, 2012

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