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3LD1
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BU of 3ld1 by Molmil
Crystal Structure of IBV Nsp2a
Descriptor: Replicase polyprotein 1a
Authors:Xu, Y, Cong, L, Wei, L, Fu, J, Chen, C, Yang, A, Tang, H, Bartlam, M, Rao, Z.
Deposit date:2010-01-12
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:IBV nsp2 is an endosome-associated protein and viral pathogenicity factor
To be Published
1ZUI
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BU of 1zui by Molmil
Structural Basis for Shikimate-binding Specificity of Helicobacter pylori Shikimate Kinase
Descriptor: (3R,4S,5R)-3,4,5-TRIHYDROXYCYCLOHEX-1-ENE-1-CARBOXYLIC ACID, PHOSPHATE ION, Shikimate kinase
Authors:Cheng, W.C, Chang, Y.N, Wang, W.C.
Deposit date:2005-05-31
Release date:2006-05-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for shikimate-binding specificity of Helicobacter pylori shikimate kinase
J.Bacteriol., 187, 2005
5Z27
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BU of 5z27 by Molmil
Crystal structure of highly active BTUO mutant P287G without dehydration
Descriptor: 1,2-ETHANEDIOL, 8-AZAXANTHINE, OXYGEN MOLECULE, ...
Authors:Hibi, T, Itoh, T, Nishiya, Y.
Deposit date:2017-12-29
Release date:2019-01-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Flexibility of a Distal Interface Loop Modulates Water Network in the Active Site of Bacillus sp. TB-90 Urate Oxidase
to be published
5Z6E
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BU of 5z6e by Molmil
Crystal structure of a beta gamma-crystallin domain of Abundant Perithecial Protein (APP) from Neurospora crassa in the Ca2+-bound form
Descriptor: CALCIUM ION, DUF1881 domain-containing protein, POTASSIUM ION
Authors:Srivastava, S.S, Sankaranarayanan, R.
Deposit date:2018-01-22
Release date:2019-01-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.864 Å)
Cite:Interface interactions between beta gamma-crystallin domain and Ig-like domain render Ca2+-binding site inoperative in abundant perithecial protein of Neurospora crassa.
Mol.Microbiol., 110, 2018
3J0A
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BU of 3j0a by Molmil
Homology model of human Toll-like receptor 5 fitted into an electron microscopy single particle reconstruction
Descriptor: Toll-like receptor 5, alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Modis, Y, Zhou, K, Kanai, R, Lee, P, Wang, H.W.
Deposit date:2011-06-02
Release date:2011-12-28
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (26 Å)
Cite:Toll-like receptor 5 forms asymmetric dimers in the absence of flagellin.
J.Struct.Biol., 177, 2012
5ZC6
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BU of 5zc6 by Molmil
Solution structure of H-RasT35S mutant protein in complex with KBFM123
Descriptor: 3-oxidanyl-~{N}-[[(2~{R})-oxolan-2-yl]methyl]naphthalene-2-carboxamide, GTPase HRas, MAGNESIUM ION, ...
Authors:Matsumoto, S, Hayashi, Y, Hiraga, T, Matsuo, K, Kataoka, T.
Deposit date:2018-02-15
Release date:2018-09-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular Basis for Allosteric Inhibition of GTP-Bound H-Ras Protein by a Small-Molecule Compound Carrying a Naphthalene Ring
Biochemistry, 57, 2018
6XG3
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BU of 6xg3 by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, at room temperature
Descriptor: CHLORIDE ION, Non-structural protein 3, PHOSPHATE ION, ...
Authors:Osipiuk, J, Tesar, C, Jedrzejczak, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-06-16
Release date:2020-06-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure of papain-like protease from SARS-CoV-2 and its complexes with non-covalent inhibitors.
Nat Commun, 12, 2021
2PET
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BU of 2pet by Molmil
Lutheran glycoprotein, N-terminal domains 1 and 2.
Descriptor: Lutheran blood group glycoprotein
Authors:Burton, N, Brady, R.L.
Deposit date:2007-04-03
Release date:2007-12-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Laminin 511/521-binding site on the Lutheran blood group glycoprotein is located at the flexible junction of Ig domains 2 and 3.
Blood, 110, 2007
2PF6
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Lutheran glycoprotein, N-terminal domains 1 and 2
Descriptor: Lutheran blood group glycoprotein
Authors:Burton, N, Brady, R.L.
Deposit date:2007-04-04
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Laminin 511/521-binding site on the Lutheran blood group glycoprotein is located at the flexible junction of Ig domains 2 and 3.
Blood, 110, 2007
3I4W
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BU of 3i4w by Molmil
Crystal Structure of the third PDZ domain of PSD-95
Descriptor: ACETATE ION, Disks large homolog 4
Authors:Camara-Artigas, A, Gavira, J.A.
Deposit date:2009-07-03
Release date:2010-04-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Novel conformational aspects of the third PDZ domain of the neuronal post-synaptic density-95 protein revealed from two 1.4A X-ray structures
J.Struct.Biol., 170, 2010
1YRO
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BU of 1yro by Molmil
Crystal structure of beta14,-galactosyltransferase mutant ARG228Lys in complex with alpha-lactalbumin in the presence of UDP-galactose and Mn
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ALPHA-LACTALBUMIN, BETA-1,4-GALACTOSYLTRANSFERASE, ...
Authors:Ramakrishnan, B, Boeggeman, E, Qasba, P.K.
Deposit date:2005-02-04
Release date:2005-03-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mutation of Arginine 228 to Lysine Enhances the Glucosyltransferase Activity of Bovine beta-1,4-Galactosyltransferase I
Biochemistry, 44, 2005
2PI8
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BU of 2pi8 by Molmil
Crystal structure of E. coli MltA with bound chitohexaose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Membrane-bound lytic murein transglycosylase A, PHOSPHATE ION
Authors:van Straaten, K.E, Barends, T.R.M, Dijkstra, B.W, Thunnissen, A.M.W.H.
Deposit date:2007-04-13
Release date:2007-05-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
2PJJ
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BU of 2pjj by Molmil
E. coli lytic transglycosylase MltA-D308A in apo-1 form
Descriptor: Membrane-bound lytic murein transglycosylase A
Authors:van Straaten, K.E, Dijkstra, B.W, Thunnissen, A.M.W.H.
Deposit date:2007-04-16
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
7CZA
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BU of 7cza by Molmil
Hexachlorobenzene monooxygenase (HcbA1) from Nocardioides sp. strain PD653 complexed with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Hexachlorobenzene oxidative dehalogenase
Authors:Guo, Y, Zheng, J.T, Zhou, N.Y.
Deposit date:2020-09-07
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Hexachlorobenzene Monooxygenase Substrate Selectivity and Catalysis: Structural and Biochemical Insights.
Appl.Environ.Microbiol., 87, 2020
7CZ3
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BU of 7cz3 by Molmil
Crystal strcuture of Acyl-CoA thioesterase from Bacillus cereus ATCC 14579
Descriptor: Acyl-CoA hydrolase, COENZYME A
Authors:Park, J, Kim, K.-J.
Deposit date:2020-09-07
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for nucleotide-independent regulation of acyl-CoA thioesterase from Bacillus cereus ATCC 14579.
Int.J.Biol.Macromol., 170, 2020
7D47
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BU of 7d47 by Molmil
Crystal structure of SARS-CoV-2 Papain-like protease C111S
Descriptor: CALCIUM ION, Non-structural protein 3, ZINC ION
Authors:Wu, K.-P, Chen, S.-K, Lu, Y.-C, Huang, Y.-C.J, Lee, M.-H.
Deposit date:2020-09-22
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of SARS-CoV-2 Papain-like protease
To Be Published
2OF9
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BU of 2of9 by Molmil
Crystal structure of apo AVR4 (D39A/C122S)
Descriptor: Avidin-related protein 4/5, FORMIC ACID
Authors:Livnah, O, Hayouka, R, Eisenberg-Domovich, Y.
Deposit date:2007-01-03
Release date:2007-12-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Critical importance of loop conformation to avidin-enhanced hydrolysis of an active biotin ester.
Acta Crystallogr.,Sect.D, 64, 2008
2PSG
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BU of 2psg by Molmil
REFINED STRUCTURE OF PORCINE PEPSINOGEN AT 1.8 ANGSTROMS RESOLUTION
Descriptor: PEPSINOGEN
Authors:James, M.N.G, Sielecki, A.R.
Deposit date:1991-01-23
Release date:1992-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Refined structure of porcine pepsinogen at 1.8 A resolution.
J.Mol.Biol., 219, 1991
3L3A
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BU of 3l3a by Molmil
Bace-1 with the aminopyridine Compound 32
Descriptor: 4-(4-{1-[(6-aminopyridin-2-yl)methyl]-5-(2-chlorophenyl)-1H-pyrrol-2-yl}phenoxy)butanenitrile, Beta-secretase 1
Authors:Olland, A.M, Chopra, R.
Deposit date:2009-12-16
Release date:2010-04-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.362 Å)
Cite:Novel pyrrolyl 2-aminopyridines as potent and selective human beta-secretase (BACE1) inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
2QJI
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BU of 2qji by Molmil
M. jannaschii ADH synthase complexed with dihydroxyacetone phosphate and glycerol
Descriptor: 1,3-DIHYDROXYACETONEPHOSPHATE, GLYCEROL, Putative aldolase MJ0400
Authors:Ealick, S.E, Morar, M.
Deposit date:2007-07-07
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid synthase, a catalyst in the archaeal pathway for the biosynthesis of aromatic amino acids.
Biochemistry, 46, 2007
6AG0
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BU of 6ag0 by Molmil
The X-ray Crystallographic Structure of Maltooligosaccharide-forming Amylase from Bacillus stearothermophilus STB04
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-amylase, CALCIUM ION
Authors:Li, Z.F, Li, Y.L, Ban, X.F, Zhang, C.Y, Jin, T.C, Xie, X.F, Gu, Z.B, Li, C.M.
Deposit date:2018-08-09
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a maltooligosaccharide-forming amylase from Bacillus stearothermophilus STB04.
Int.J.Biol.Macromol., 138, 2019
4OVZ
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BU of 4ovz by Molmil
X-Ray Structural and Biological Evaluation of a Series of Potent and Highly Selective Inhibitors of Human Coronavirus Papain-Like Proteases
Descriptor: DIMETHYL SULFOXIDE, N-[(4-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide, Papain-like proteinase, ...
Authors:Baez-Santos, Y.M, Mesecar, A.
Deposit date:2014-01-28
Release date:2014-04-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray Structural and Biological Evaluation of a Series of Potent and Highly Selective Inhibitors of Human Coronavirus Papain-like Proteases.
J.Med.Chem., 57, 2014
2AF4
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Phosphotransacetylase from Methanosarcina thermophila co-crystallized with coenzyme A
Descriptor: COENZYME A, Phosphate acetyltransferase
Authors:Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H.
Deposit date:2005-07-25
Release date:2006-01-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila.
J.Bacteriol., 188, 2006
2AE0
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BU of 2ae0 by Molmil
Crystal structure of MltA from Escherichia coli reveals a unique lytic transglycosylase fold
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, Membrane-bound lytic murein transglycosylase A
Authors:Van Straaten, K.E, Dijkstra, B.W, Vollmer, W, Thunnissen, A.M.W.H.
Deposit date:2005-07-21
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of MltA from Escherichia coli Reveals a Unique Lytic Transglycosylase Fold
J.Mol.Biol., 352, 2005
2AF3
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Phosphotransacetylase from Methanosarcina thermophila soaked with Coenzyme A
Descriptor: COENZYME A, Phosphate acetyltransferase, SULFATE ION
Authors:Lawrence, S.H, Luther, K.B, Ferry, J.G, Schindelin, H.
Deposit date:2005-07-25
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional studies suggest a catalytic mechanism for the phosphotransacetylase from Methanosarcina thermophila.
J.Bacteriol., 188, 2006

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