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6P4W
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BU of 6p4w by Molmil
XPB helicase in a complex with truncated Bax1 from Sulfurisphaera tokodaii at 2.96 Angstrom resolution
Descriptor: CHLORIDE ION, DNA-dependent ATPase XPBII, Endonuclease Bax1, ...
Authors:Fan, L, He, F, DuPrez, K.T.
Deposit date:2019-05-28
Release date:2020-06-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.956 Å)
Cite:XPB helicase in a complex with truncated Bax1 from Sulfurisphaera tokodaii at 2.96 Angstrom resolution
To Be Published
5MF0
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BU of 5mf0 by Molmil
Crystal structure of Smad4-MH1 bound to the GGCCG site.
Descriptor: CHLORIDE ION, DNA (5'-D(P*AP*CP*GP*GP*GP*CP*CP*GP*CP*GP*GP*CP*CP*CP*GP*T)-3'), MH1 domain of human Smad4, ...
Authors:Kaczmarska, Z, Freier, R, Marquez, J.A, Macias, M.J.
Deposit date:2016-11-16
Release date:2017-11-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors.
Nat Commun, 8, 2017
1GRJ
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BU of 1grj by Molmil
GREA TRANSCRIPT CLEAVAGE FACTOR FROM ESCHERICHIA COLI
Descriptor: GREA PROTEIN
Authors:Darst, S.A, Stebbins, C.E.
Deposit date:1995-05-02
Release date:1995-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the GreA transcript cleavage factor from Escherichia coli.
Nature, 373, 1995
2W29
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BU of 2w29 by Molmil
Gly102Thr mutant of Rv3291c
Descriptor: PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN
Authors:Shrivastava, T, Dey, S, Ravishankar, R.
Deposit date:2008-10-25
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Ligand-Induced Structural Transitions, Mutational Analysis, and 'Open' Quaternary Structure of the M. Tuberculosis Feast/Famine Regulatory Protein (Rv3291C).
J.Mol.Biol., 392, 2009
2P52
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BU of 2p52 by Molmil
mouse p53 DNA-binding domain in zinc-free oxidized state
Descriptor: Cellular tumor antigen p53
Authors:Kwon, E, Kim, D.Y, Suh, S.W, Kim, K.K.
Deposit date:2007-03-14
Release date:2008-01-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of the mouse p53 core domain in zinc-free state.
Proteins, 70, 2008
5YHX
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BU of 5yhx by Molmil
Structure of Lactococcus lactis ZitR, wild type
Descriptor: ZINC ION, Zinc transport transcriptional regulator
Authors:Song, Y, Liu, H, Zhu, R, Yi, C, Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Allosteric histidine switch for regulation of intracellular zinc(II) fluctuation.
Proc.Natl.Acad.Sci.USA, 114, 2017
6P4O
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BU of 6p4o by Molmil
Complex of XPB helicase with Bax1 endonuclease from Sulfurisphaera tokodaii at 3.15 Angstroms resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA-dependent ATPase XPBII, ...
Authors:Fan, L, DuPrez, K.T.
Deposit date:2019-05-28
Release date:2020-06-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Complex of XPB helicase with Bax1 endonuclease from Sulfurisphaera tokodaii at 3.15 Angstroms resolution
To Be Published
6SJ7
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BU of 6sj7 by Molmil
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to RBM39 and Indisulam
Descriptor: DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, DNA damage-binding protein 1, ...
Authors:Srinivas, H.
Deposit date:2019-08-12
Release date:2019-12-18
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Structural basis of indisulam-mediated RBM39 recruitment to DCAF15 E3 ligase complex.
Nat.Chem.Biol., 16, 2020
5YI0
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BU of 5yi0 by Molmil
Structure of Lactococcus lactis ZitR, C30AH42A mutant
Descriptor: ZINC ION, Zinc transport transcriptional regulator
Authors:Song, Y, Liu, H, Zhu, R, Yi, C, Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Allosteric histidine switch for regulation of intracellular zinc(II) fluctuation.
Proc.Natl.Acad.Sci.USA, 114, 2017
5GTC
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BU of 5gtc by Molmil
Crystal structure of complex between DMAP-SH conjugated with a Kaposi's sarcoma herpesvirus LANA peptide (5-15) and nucleosome core particle
Descriptor: CHLORIDE ION, DNA (146-MER), Histone H2A type 1-B/E, ...
Authors:Arimura, Y, Kato, D, Suto, H, Kurumizaka, H, Kawashima, S.A, Yamatsugu, K, Kanai, M.
Deposit date:2016-08-19
Release date:2017-06-28
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Synthetic Posttranslational Modifications: Chemical Catalyst-Driven Regioselective Histone Acylation of Native Chromatin.
J. Am. Chem. Soc., 139, 2017
4ZWT
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BU of 4zwt by Molmil
Crystal Structure of the Bacteriophage T4 recombination mediator protein UvsY, Lattice Type IV
Descriptor: Recombination protein uvsY
Authors:Gajewski, S, White, S.W.
Deposit date:2015-05-19
Release date:2016-03-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Structure and mechanism of the phage T4 recombination mediator protein UvsY.
Proc.Natl.Acad.Sci.USA, 113, 2016
5YI1
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BU of 5yi1 by Molmil
Structure of Lactococcus lactis ZitR, C30AH42A mutant in apo form
Descriptor: Zinc transport transcriptional regulator
Authors:Song, Y, Liu, H, Zhu, R, Yi, C, Chen, P.
Deposit date:2017-10-01
Release date:2017-12-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Allosteric histidine switch for regulation of intracellular zinc(II) fluctuation.
Proc.Natl.Acad.Sci.USA, 114, 2017
6Y8P
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BU of 6y8p by Molmil
Crystal structure of SNAP-tag labeled with a benzyl-tetramethylrhodamine fluorophore
Descriptor: 1,2-ETHANEDIOL, O6-alkylguanine-DNA alkyltransferase mutant, ZINC ION, ...
Authors:Gotthard, G, Tanzer, T, Johnsson, K, Hiblot, J.
Deposit date:2020-03-05
Release date:2021-03-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag.
Biochemistry, 60, 2021
1F9N
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BU of 1f9n by Molmil
CRYSTAL STRUCTURE OF AHRC, THE ARGININE REPRESSOR/ACTIVATOR PROTEIN FROM BACILLUS SUBTILIS
Descriptor: ARGININE REPRESSOR/ACTIVATOR PROTEIN
Authors:Dennis, C.A, Glykos, N.M, Parsons, M.R, Phillips, S.E.V.
Deposit date:2000-07-11
Release date:2002-02-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The structure of AhrC, the arginine repressor/activator protein from Bacillus subtilis.
Acta Crystallogr.,Sect.D, 58, 2002
2W24
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BU of 2w24 by Molmil
M. tuberculosis Rv3291c complexed to Lysine
Descriptor: LYSINE, PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN
Authors:Shrivastava, T, Ramachandran, R.
Deposit date:2008-10-24
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ligand-Induced Structural Transitions, Mutational Analysis, and 'Open' Quaternary Structure of the M. Tuberculosis Feast/Famine Regulatory Protein (Rv3291C).
J.Mol.Biol., 392, 2009
2W25
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BU of 2w25 by Molmil
Crystal structure of Glu104Ala mutant
Descriptor: PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN
Authors:Shrivastava, T, RAmachandran, R.
Deposit date:2008-10-24
Release date:2009-11-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Ligand-Induced Structural Transitions, Mutational Analysis, and 'Open' Quaternary Structure of the M. Tuberculosis Feast/Famine Regulatory Protein (Rv3291C).
J.Mol.Biol., 392, 2009
5V7M
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BU of 5v7m by Molmil
PCNA mutant L126A/I128A Protein Defective in Gene Silencing
Descriptor: MAGNESIUM ION, Proliferating cell nuclear antigen
Authors:Kondratick, C.M, Litman, J.M, Washington, M.T, Dieckman, L.M.
Deposit date:2017-03-20
Release date:2018-03-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structures of PCNA mutant proteins defective in gene silencing suggest a novel interaction site on the front face of the PCNA ring.
PLoS ONE, 13, 2018
7L20
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BU of 7l20 by Molmil
Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.
Descriptor: 16S rRNA mitochondrial, 39 S P-site finger, 39S ribosomal protein L10, ...
Authors:Agrawal, E, Koripella, R.
Deposit date:2020-12-15
Release date:2021-05-12
Last modified:2021-12-01
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance.
Nat Commun, 12, 2021
3BRJ
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BU of 3brj by Molmil
Crystal structure of mannitol operon repressor (MtlR) from Vibrio parahaemolyticus RIMD 2210633
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Mannitol operon repressor
Authors:Tan, K, Zhou, M, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-12-21
Release date:2008-01-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The mannitol operon repressor MtlR belongs to a new class of transcription regulators in bacteria.
J.Biol.Chem., 284, 2009
5V7L
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BU of 5v7l by Molmil
PCNA mutant R61A/D63A Protein Defective in Gene Silencing
Descriptor: Proliferating cell nuclear antigen
Authors:Kondratick, C.M, Litman, J.M, Washington, M.T, Dieckman, L.M.
Deposit date:2017-03-20
Release date:2018-03-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Crystal structures of PCNA mutant proteins defective in gene silencing suggest a novel interaction site on the front face of the PCNA ring.
PLoS ONE, 13, 2018
1RR7
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BU of 1rr7 by Molmil
Crystal structure of the Middle Operon Regulator protein of Bacteriophage Mu
Descriptor: Middle operon regulator, PLATINUM (II) ION
Authors:Kumaraswami, M, Howe, M.M, Park, H.W.
Deposit date:2003-12-08
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the Mor protein of bacteriophage Mu, a member of the Mor/C family of transcription activators.
J.Biol.Chem., 279, 2004
2AU0
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BU of 2au0 by Molmil
Unmodified preinsertion binary complex
Descriptor: 5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3', 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3', CALCIUM ION, ...
Authors:Rechkoblit, O, Malinina, L, Cheng, Y, Kuryavyi, V, Broyde, S, Geacintov, N.E, Patel, D.J.
Deposit date:2005-08-26
Release date:2006-01-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Stepwise Translocation of Dpo4 Polymerase during Error-Free Bypass of an oxoG Lesion
Plos Biol., 4, 2006
5V3O
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BU of 5v3o by Molmil
Cereblon in complex with DDB1 and CC-220
Descriptor: (3S)-3-[4-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione, DNA damage-binding protein 1, Protein cereblon, ...
Authors:Matyskiela, M, Pagarigan, B, Chamberlain, P.
Deposit date:2017-03-07
Release date:2017-05-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A Cereblon Modulator (CC-220) with Improved Degradation of Ikaros and Aiolos.
J. Med. Chem., 61, 2018
5V7K
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BU of 5v7k by Molmil
PCNA mutant D41A/D42A Protein Defective in Gene Silencing
Descriptor: Proliferating cell nuclear antigen
Authors:Kondratick, C.M, Litman, J.M, Washington, M.T, Dieckman, L.M.
Deposit date:2017-03-20
Release date:2018-03-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal structures of PCNA mutant proteins defective in gene silencing suggest a novel interaction site on the front face of the PCNA ring.
PLoS ONE, 13, 2018
5UOQ
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BU of 5uoq by Molmil
CRYSTAL STRUCTURE OF THE PROTOTYPE FOAMY VIRUS INTASOME WITH A 2- PYRIDINONE AMINAL INHIBITOR (COMPOUND 31)
Descriptor: (3R)-8-[(3-chloro-4-fluorophenyl)methyl]-6-hydroxy-1,5,7-trioxo-1,2',3',5,7,8,9,10-octahydro-2H-spiro[imidazo[5,1-a][2,6]naphthyridine-3,1'-indene]-7'-carbonitrile, GLYCEROL, INTEGRASE, ...
Authors:Klein, D.J.
Deposit date:2017-02-01
Release date:2017-03-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Discovery and optimization of 2-pyridinone aminal integrase strand transfer inhibitors for the treatment of HIV.
Bioorg. Med. Chem. Lett., 27, 2017

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