Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3GKB
DownloadVisualize
BU of 3gkb by Molmil
Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
Descriptor: GLYCEROL, Putative enoyl-CoA hydratase
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Chang, S, Romero, R, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-10
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a putative enoyl-CoA hydratase from Streptomyces avermitilis
To be Published
3H0X
DownloadVisualize
BU of 3h0x by Molmil
Crystal structure of peptide-binding domain of Kar2 protein from Saccharomyces cerevisiae
Descriptor: 78 kDa glucose-regulated protein homolog
Authors:Osipiuk, J, Bigelow, L, Gu, M, Sahi, C, Craig, E.A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-04-10
Release date:2009-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:X-ray crystal structure of peptide-binding domain of Kar2 protein from Saccharomyces cerevisiae.
To be Published
3H16
DownloadVisualize
BU of 3h16 by Molmil
Crystal structure of a bacteria TIR domain, PdTIR from Paracoccus denitrificans
Descriptor: SULFATE ION, TIR protein
Authors:Chan, S.L, Low, L.Y, Santelli, E, Pascual, J.
Deposit date:2009-04-11
Release date:2009-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Mimicry in Innate Immunity: CRYSTAL STRUCTURE OF A BACTERIAL TIR DOMAIN.
J.Biol.Chem., 284, 2009
3GNL
DownloadVisualize
BU of 3gnl by Molmil
Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b
Descriptor: uncharacterized protein, DUF633, LMOf2365_1472
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-17
Release date:2009-04-21
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b
To be Published
3GNU
DownloadVisualize
BU of 3gnu by Molmil
Toxin fold as basis for microbial attack and plant defense
Descriptor: 25 kDa protein elicitor, CHLORIDE ION, GUANIDINE
Authors:Ottmann, C, Luberacki, B, Kuefner, I, Koch, W, Brunner, F, Weyand, M, Mattinen, L, Pirhonen, M, Anderluh, G, Seitz, H.U, Nuernberger, T, Oecking, C.
Deposit date:2009-03-18
Release date:2009-06-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A common toxin fold mediates microbial attack and plant defense
Proc.Natl.Acad.Sci.USA, 106, 2009
3H35
DownloadVisualize
BU of 3h35 by Molmil
Structure of the uncharacterized protein ABO_0056 from the hydrocarbon-degrading marine bacterium Alcanivorax borkumensis SK2.
Descriptor: 1,2-ETHANEDIOL, S,R MESO-TARTARIC ACID, uncharacterized protein ABO_0056
Authors:Cuff, M.E, Evdokimova, E, Kagan, O, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-04-15
Release date:2009-05-12
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the uncharacterized protein ABO_0056 from the hydrocarbon-degrading marine bacterium Alcanivorax borkumensis SK2.
TO BE PUBLISHED
3GOA
DownloadVisualize
BU of 3goa by Molmil
Crystal structure of the Salmonella typhimurium FadA 3-ketoacyl-CoA thiolase
Descriptor: 3-ketoacyl-CoA thiolase, CALCIUM ION, CHLORIDE ION, ...
Authors:Anderson, S.M, Skarina, T, Onopriyenko, O, Wawrzak, Z, Papazisi, L, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-03-18
Release date:2009-03-31
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:

3H3N
DownloadVisualize
BU of 3h3n by Molmil
Glycerol Kinase H232R with Glycerol
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Glycerol kinase, ...
Authors:Yeh, J.I, Kettering, R.D.
Deposit date:2009-04-16
Release date:2009-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation
Biochemistry, 48, 2009
3GOV
DownloadVisualize
BU of 3gov by Molmil
Crystal structure of the catalytic region of human MASP-1
Descriptor: GLYCEROL, MASP-1
Authors:Harmat, V, Dobo, J, Beinrohr, L, Sebestyen, E, Zavodszky, P, Gal, P.
Deposit date:2009-03-20
Release date:2009-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:MASP-1, a promiscuous complement protease: structure of its catalytic region reveals the basis of its broad specificity.
J.Immunol., 183, 2009
3H46
DownloadVisualize
BU of 3h46 by Molmil
Glycerol Kinase H232E with Glycerol
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Glycerol kinase, ...
Authors:Yeh, J.I, Kettering, R.D.
Deposit date:2009-04-17
Release date:2009-06-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation
Biochemistry, 48, 2009
3GP4
DownloadVisualize
BU of 3gp4 by Molmil
Crystal structure of putative MerR family transcriptional regulator from listeria monocytogenes
Descriptor: D-METHIONINE, GLYCEROL, SODIUM ION, ...
Authors:Ramagopal, U.A, Toro, R, Morano, C, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-03-20
Release date:2009-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of putative MerR family transcriptional regulator from Listeria monocytogenes
To be published
3GQ1
DownloadVisualize
BU of 3gq1 by Molmil
The structure of the caulobacter crescentus clpS protease adaptor protein in complex with a WLFVQRDSKE decapeptide
Descriptor: ATP-dependent Clp protease adapter protein clpS, MAGNESIUM ION, WLFVQRDSKE peptide
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-03-23
Release date:2009-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.496 Å)
Cite:Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009
3H53
DownloadVisualize
BU of 3h53 by Molmil
Crystal Structure of human alpha-N-acetylgalactosaminidase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-N-acetylgalactosaminidase, ...
Authors:Clark, N.E, Garman, S.C.
Deposit date:2009-04-21
Release date:2009-10-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The 1.9 a structure of human alpha-N-acetylgalactosaminidase: The molecular basis of Schindler and Kanzaki diseases
J.Mol.Biol., 393, 2009
3GQE
DownloadVisualize
BU of 3gqe by Molmil
Crystal structure of macro domain of Venezuelan Equine Encephalitis virus
Descriptor: BICINE, Non-structural protein 3
Authors:Jamal, S, Malet, H, Coutard, B, Canard, B.
Deposit date:2009-03-24
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structures of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket
J.Virol., 83, 2009
3GQK
DownloadVisualize
BU of 3gqk by Molmil
Crystal Structure of the Bacteriophage phi29 gene product 12 C-terminal fragment in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Preneck appendage protein
Authors:Xiang, Y, Rossmann, M.G.
Deposit date:2009-03-24
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic insights into the autocatalytic assembly mechanism of a bacteriophage tail spike.
Mol.Cell, 34, 2009
3GQO
DownloadVisualize
BU of 3gqo by Molmil
Crystal structure of macro domain of Venezuelan Equine Encephalitis virus in complex with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Non-structural protein 3
Authors:Malet, H, Jamal, S, Coutard, B, Ferron, F, Canard, B.
Deposit date:2009-03-24
Release date:2009-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structures of Chikungunya and Venezuelan equine encephalitis virus nsP3 macro domains define a conserved adenosine binding pocket
J.Virol., 83, 2009
3GR1
DownloadVisualize
BU of 3gr1 by Molmil
Periplasmic domain of the T3SS inner membrane protein PrgH from S.typhimurium (fragment 170-392)
Descriptor: Protein prgH
Authors:Yip, C.K, Vockovic, M, Yu, A.C, Strynadka, N.C.J.
Deposit date:2009-03-24
Release date:2009-05-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A conserved structural motif mediates formation of the periplasmic rings in the type III secretion system.
Nat.Struct.Mol.Biol., 16, 2009
3H6R
DownloadVisualize
BU of 3h6r by Molmil
Clitocypin, a beta-trefoil cysteine protease inhibitor
Descriptor: Clitocypin analog
Authors:Renko, M, Sabotic, J, Brzin, J, Turk, D.
Deposit date:2009-04-23
Release date:2009-10-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Versatile loops in mycocypins inhibit three protease families.
J.Biol.Chem., 285, 2010
3GSH
DownloadVisualize
BU of 3gsh by Molmil
Three-dimensional structure of a post translational modified barley LTP1
Descriptor: (12E)-10-oxooctadec-12-enoic acid, Non-specific lipid-transfer protein 1, SODIUM ION, ...
Authors:Lascombe, M.B, Prange, T, Bakan, B, Marion, D.
Deposit date:2009-03-27
Release date:2009-12-15
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of oxylipin-conjugated barley LTP1 highlights the unique plasticity of the hydrophobic cavity of these plant lipid-binding proteins.
Biochem.Biophys.Res.Commun., 390, 2009
3H7P
DownloadVisualize
BU of 3h7p by Molmil
Crystal structure of K63-linked di-ubiquitin
Descriptor: CADMIUM ION, Ubiquitin
Authors:Weeks, S.D, Grasty, K.C, Hernandez-Cuebas, L, Loll, P.J.
Deposit date:2009-04-28
Release date:2009-09-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of Lys-63-linked tri- and di-ubiquitin reveal a highly extended chain architecture.
Proteins, 77, 2009
3GL9
DownloadVisualize
BU of 3gl9 by Molmil
The structure of a histidine kinase-response regulator complex sheds light into two-component signaling and reveals a novel cis autophosphorylation mechanism
Descriptor: MAGNESIUM ION, Response regulator, SULFATE ION
Authors:Casino, P, Rubio, V, Marina, A.
Deposit date:2009-03-11
Release date:2009-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insight into Partner Specificity and Phosphoryl Transfer in Two-Component Signal Transduction
Cell(Cambridge,Mass.), 139, 2009
3H0Q
DownloadVisualize
BU of 3h0q by Molmil
Crystal structure of the carboxyltransferase domain of acetyl-coenzyme A carboxylase in complex with compound 3
Descriptor: 4-({4-[(2-methylquinolin-6-yl)methyl]piperidin-1-yl}carbonyl)-2-phenylquinoline, Acetyl-CoA carboxylase
Authors:Zhang, H, Tong, L.
Deposit date:2009-04-10
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of small molecule isozyme non-specific inhibitors of mammalian acetyl-CoA carboxylase 1 and 2.
Bioorg.Med.Chem.Lett., 20, 2010
3GLJ
DownloadVisualize
BU of 3glj by Molmil
A polymorph of carboxypeptidase B zymogen structure
Descriptor: Carboxypeptidase B, GLYCEROL, ZINC ION
Authors:Fernandez, D.
Deposit date:2009-03-12
Release date:2009-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Analysis of a new crystal form of procarboxypeptidase B: further insights into the catalytic mechanism
Biopolymers, 2009
3GN9
DownloadVisualize
BU of 3gn9 by Molmil
Crystal structure of the major pseudopilin from the type 2 secretion system of Vibrio vulnificus
Descriptor: CALCIUM ION, D-MALATE, Type II secretory pathway, ...
Authors:Korotkov, K.V, Gray, M.D, Kreger, A, Turley, S, Sandkvist, M, Hol, W.G.J.
Deposit date:2009-03-16
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Calcium is essential for the major pseudopilin in the type 2 secretion system.
J.Biol.Chem., 284, 2009
3GO9
DownloadVisualize
BU of 3go9 by Molmil
Predicted insulinase family protease from Yersinia pestis
Descriptor: DI(HYDROXYETHYL)ETHER, ZINC ION, insulinase family protease
Authors:Osipiuk, J, Maltseva, N, Onopriyenko, O, Peterson, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-03-18
Release date:2009-04-07
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:X-ray crystal structure of predicted insulinase family protease from Yersinia pestis.
To be Published

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon