PDB: 47065 resultsInfo pagesStatus searchChemie searchBIRD

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5O31	Mitochondrial complex I in the deactive state Descriptor: Acyl carrier protein, mitochondrial, FE2/S2 (INORGANIC) CLUSTER, ... Authors: Blaza, J.N, Vinothkumar, K.R, Hirst, J. Deposit date: 2017-05-23 Release date: 2018-01-17 Last modified: 2019-10-23 Method: ELECTRON MICROSCOPY (4.13 Å) Cite: Structure of the Deactive State of Mammalian Respiratory Complex I. Structure, 26, 2018
4GN5	OBody AM3L15 bound to hen egg-white lysozyme Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, GLYCEROL, ... Authors: Steemson, J.D, Liddament, M.T. Deposit date: 2012-08-16 Release date: 2013-08-21 Last modified: 2014-02-12 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold. Plos One, 9, 2014
4R18	Ligand-induced Lys33-Thr1 crosslinking at subunit beta5 of the yeast 20S proteasome Descriptor: ALPHA-AMINOBUTYRIC ACID, MAGNESIUM ION, PROTEASOME SUBUNIT ALPHA TYPE-1, ... Authors: Dubiella, C, Cui, H, Gersch, M, Brouwer, A.J, Sieber, S.A, Krueger, A, Liskamp, R, Groll, M. Deposit date: 2014-08-04 Release date: 2014-10-15 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Selective inhibition of the immunoproteasome by ligand-induced crosslinking of the active site. Angew.Chem.Int.Ed.Engl., 53, 2014
7BSI	Epstein-Barr virus, one asymmetric unit structure of the icosahedral tegumented capsid Descriptor: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ... Authors: Li, Z, Yu, X. Deposit date: 2020-03-30 Release date: 2020-09-30 Last modified: 2020-10-14 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: CryoEM structure of the tegumented capsid of Epstein-Barr virus. Cell Res., 30, 2020
5M52	Crystal structure of yeast Brr2 full-lenght in complex with Prp8 Jab1 domain Descriptor: Pre-mRNA-splicing factor 8, Pre-mRNA-splicing helicase BRR2 Authors: Wollenhaupt, J, Absmeier, E, Becke, C, Santos, K.F, Wahl, M.C. Deposit date: 2016-10-20 Release date: 2016-12-07 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Interplay of cis- and trans-regulatory mechanisms in the spliceosomal RNA helicase Brr2. Cell Cycle, 16, 2017
3KM4	Optimization of Orally Bioavailable Alkyl Amine Renin Inhibitors Descriptor: (3R)-3-[(1S)-4-(acetylamino)-1-(3-chlorophenyl)-1-hydroxybutyl]-N-{(1S)-2-cyclohexyl-1-[(methylamino)methyl]ethyl}piperidine-1-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Wu, Z, McKeever, B.M. Deposit date: 2009-11-09 Release date: 2010-01-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Optimization of orally bioavailable alkyl amine renin inhibitors. Bioorg.Med.Chem.Lett., 20, 2010
3KIP	Crystal structure of type-II 3-dehydroquinase from C. albicans Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-dehydroquinase, type II, ... Authors: Trapani, S, Schoehn, G, Navaza, J, Abergel, C. Deposit date: 2009-11-02 Release date: 2010-05-12 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Macromolecular crystal data phased by negative-stained electron-microscopy reconstructions. Acta Crystallogr.,Sect.D, 66, 2010
1YNO	High Resolution Structure of Benzoylformate Decarboxylase from Pseudomonas Putida Complexed with Thiamine Thiazolone Diphosphate Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Benzoylformate decarboxylase, CALCIUM ION, ... Authors: Bera, A.K, Hasson, M.S. Deposit date: 2005-01-24 Release date: 2006-01-17 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.22 Å) Cite: High Resolution Structure of Benzoylformate Decarboxylase from Pseudomonas Putida Complexed with Thiamine Thiazolone Diphosphate; To be Published
3OJ8	Alpha-Ketoheterocycle Inhibitors of Fatty Acid Amide Hydrolase Containing Additional Conformational Contraints in the Acyl Side Chain Descriptor: (S)-[(2S)-6-phenoxy-1,2,3,4-tetrahydronaphthalen-2-yl](5-pyridin-2-yl-1,3-oxazol-2-yl)methanol, CHLORIDE ION, Fatty-acid amide hydrolase 1 Authors: Mileni, M, Stevens, R.C, Boger, D.L. Deposit date: 2010-08-20 Release date: 2011-07-06 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: alpha-Ketoheterocycle Inhibitors of Fatty Acid Amide Hydrolase Containing Additional Conformational Contraints in the Acyl Side Chain J.Med.Chem., 54, 2011
4QV4	yCP beta5-M45T mutant Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ... Authors: Huber, E.M, Heinemeyer, W, Groll, M. Deposit date: 2014-07-14 Release date: 2015-02-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure, 23, 2015
1YNW	Crystal Structure of Vitamin D Receptor and 9-cis Retinoic Acid Receptor DNA-Binding Domains Bound to a DR3 Response Element Descriptor: 5'-d(*TP*TP*AP*GP*GP*TP*CP*AP*CP*GP*AP*AP*GP*GP*TP*CP*AP*A)-3', 5'-d(*TP*TP*TP*GP*AP*CP*CP*TP*TP*CP*GP*TP*GP*AP*CP*CP*TP*A)-3', Retinoic acid receptor RXR-alpha, ... Authors: Shaffer, P.L, Gewirth, D.T. Deposit date: 2005-01-25 Release date: 2005-02-15 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural analysis of RXR-VDR interactions on DR3 DNA J.Steroid Biochem.Mol.Biol., 89-90, 2004
4QW6	yCP beta5-M45V mutant in complex with carfilzomib Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ... Authors: Huber, E.M, Heinemeyer, W, Groll, M. Deposit date: 2014-07-16 Release date: 2015-02-04 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Bortezomib-Resistant Mutant Proteasomes: Structural and Biochemical Evaluation with Carfilzomib and ONX 0914. Structure, 23, 2015
3OLF	Crystal structure of human FXR in complex with 4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)-3-methylbenzoic acid Descriptor: 4-({(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylacetyl}amino)-3-methylbenzoic acid, Bile acid receptor, peptide of Nuclear receptor coactivator 1 Authors: Rudolph, M.G. Deposit date: 2010-08-26 Release date: 2011-01-19 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Optimization of a novel class of benzimidazole-based farnesoid X receptor (FXR) agonists to improve physicochemical and ADME properties Bioorg.Med.Chem.Lett., 21, 2011
1XMO	Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Murphy, F.V, Ramakrishnan, V, Malkiewicz, A, Agris, P.F. Deposit date: 2004-10-04 Release date: 2004-12-14 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.25 Å) Cite: The role of modifications in codon discrimination by tRNA(Lys)(UUU). Nat.Struct.Mol.Biol., 11, 2004
4QY1	Structure of H10 from human-infecting H10N8 in complex with avian receptor Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Wang, M, Zhang, W, Qi, J, Wang, F, Zhou, J, Bi, Y, Wu, Y, Sun, H, Liu, J, Huang, C, Li, X, Yan, J, Shu, Y, Shi, Y, Gao, G.F. Deposit date: 2014-07-23 Release date: 2015-01-28 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.594 Å) Cite: Structural basis for preferential avian receptor binding by the human-infecting H10N8 avian influenza virus Nat Commun, 6, 2015
1XBP	Inhibition of peptide bond formation by pleuromutilins: The structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with Tiamulin Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L11, 50S ribosomal protein L13, ... Authors: Schluenzen, F, Pyetan, E, Fucini, P, Yonath, A, Harms, J.M. Deposit date: 2004-08-31 Release date: 2005-03-01 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Inhibition of peptide bond formation by pleuromutilins: the structure of the 50S ribosomal subunit from Deinococcus radiodurans in complex with tiamulin. Mol.Microbiol., 54, 2004
4GRE	DNA holliday junction stabilized by iodine halogen bond. I2J Construct of related reference Descriptor: DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(IOU)P*CP*GP*G)-3') Authors: Ho, P.S, Carter, M. Deposit date: 2012-08-24 Release date: 2013-07-31 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Enthalpy-entropy compensation in biomolecular halogen bonds measured in DNA junctions. Biochemistry, 52, 2013
7C09	Structure of lysozyme obtained in SSRF using serial crystallography Descriptor: Lysozyme C Authors: Zhao, F.Z. Deposit date: 2020-04-30 Release date: 2020-12-09 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.2 Å) Cite: A novel sample delivery system based on circular motion for in situ serial synchrotron crystallography. Lab Chip, 20, 2020
3KQ7	Structure of human p38alpha with N-[4-methyl-3-(6-{[2-(1-methylpyrrolidin-2-yl)ethyl]amino}pyridine-3-amido)phenyl]-2-(morpholin-4-yl)pyridine-4-carboxamide Descriptor: ACETATE ION, Mitogen-activated protein kinase p38 alpha, N-(2-methyl-5-{[(2-morpholin-4-ylpyridin-4-yl)carbonyl]amino}phenyl)-6-({2-[(2S)-1-methylpyrrolidin-2-yl]ethyl}amino)py ridine-3-carboxamide Authors: Cheng, R.K.Y, Barker, J, Whittaker, M. Deposit date: 2009-11-17 Release date: 2009-12-01 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of human p38alpha with N-[4-methyl-3-(6-{[2-(1-methylpyrrolidin-2-yl)ethyl]amino}pyridine-3-amido)phenyl]-2-(morpholin-4-yl)pyridine-4-carboxamide TO BE PUBLISHED
3KTM	Structure of the Heparin-induced E1-Dimer of the Amyloid Precursor Protein (APP) Descriptor: (3R)-butane-1,3-diol, ACETATE ION, Amyloid beta A4 protein, ... Authors: Dahms, S.O, Hoefgen, S, Roeser, D, Schlott, B, Guhrs, K.H, Than, M.E. Deposit date: 2009-11-25 Release date: 2010-02-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structure and biochemical analysis of the heparin-induced E1 dimer of the amyloid precursor protein. Proc.Natl.Acad.Sci.USA, 107, 2010
7C17	The cryo-EM structure of E. coli CueR transcription activation complex with fully duplex promoter DNA Descriptor: DNA (72-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Fang, C.L, Zhang, Y. Deposit date: 2020-05-02 Release date: 2020-09-30 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (4.22 Å) Cite: CueR activates transcription through a DNA distortion mechanism. Nat.Chem.Biol., 17, 2021
4FNV	Crystal Structure of Heparinase III Descriptor: Heparinase III protein, heparitin sulfate lyase Authors: Dong, W, Ye, S. Deposit date: 2012-06-20 Release date: 2012-11-28 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis of heparan sulfate-specific degradation by heparinase III. Protein Cell, 3, 2012
3OIJ	Crystal structure of Saccharomyces Cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine and 2 molecules of cognate RNA Descriptor: 5'-R(*GP*GP*GP*CP*UP*UP*CP*AP*AP*CP*GP*CP*CP*C)-3', Essential for mitotic growth 1, MAGNESIUM ION, ... Authors: Thomas, S.R, LaRonde-LeBlanc, N. Deposit date: 2010-08-19 Release date: 2010-12-01 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural insight into the functional mechanism of Nep1/Emg1 N1-specific pseudouridine methyltransferase in ribosome biogenesis. Nucleic Acids Res., 39, 2011
3KZA	Crystal structure of Gyuba, a patched chimera of b-lactglobulin Descriptor: Beta-lactoglobulin Authors: Tsuge, H, Ohtomo, H, Utsunomiya, H, Konuma, T, Ikeguchi, M. Deposit date: 2009-12-08 Release date: 2010-12-22 Last modified: 2021-11-10 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure and stability of Gyuba, a patched chimera of b-lactoglobulin Protein Sci., 20, 2011
7A6U	Cryo-EM structure of the cytoplasmic domain of human TRPC6 Descriptor: Short transient receptor potential channel 6, UNKNOWN ATOM OR ION Authors: Grieben, M, Pike, A.C.W, Wang, D, Mukhopadhyay, S.M.M, Chalk, R, Marsden, B.D, Burgess-Brown, N.A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Carpenter, E.P, Structural Genomics Consortium (SGC) Deposit date: 2020-08-26 Release date: 2020-09-30 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (3.62 Å) Cite: Cryo-EM structure of the cytoplasmic domain of human TRPC6 TO BE PUBLISHED

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