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4E89
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BU of 4e89 by Molmil
Crystal Structure of RnaseH from gammaretrovirus
Descriptor: CADMIUM ION, MAGNESIUM ION, RNase H
Authors:Kim, J.H, Kim, S.J.
Deposit date:2012-03-19
Release date:2012-10-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of xenotropic murine leukaemia virus-related virus (XMRV) ribonuclease H
Biosci.Rep., 32, 2012
3PLD
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BU of 3pld by Molmil
Endothiapepsin in complex with a fragment
Descriptor: 4-chlorobenzyl carbamimidothioate, Endothiapepsin, GLYCEROL
Authors:Koester, H, Heine, A, Klebe, G.
Deposit date:2010-11-15
Release date:2011-11-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A small nonrule of 3 compatible fragment library provides high hit rate of endothiapepsin crystal structures with various fragment chemotypes.
J.Med.Chem., 54, 2011
3PLK
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BU of 3plk by Molmil
Bovine trypsin variant X(tripleIle227) in complex with small molecule inhibitor
Descriptor: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
Authors:Tziridis, A, Neumann, P, Braeuer, U, Kolenko, P, Stubbs, M.T.
Deposit date:2010-11-15
Release date:2011-12-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
2X5L
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BU of 2x5l by Molmil
X-RAY STRUCTURE OF THE SUBSTRATE-FREE MYCOBACTERIUM TUBERCULOSIS CYTOCHROME P450 CYP125, ALTERNATIVE CRYSTAL FORM
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, PUTATIVE CYTOCHROME P450 125
Authors:Ouellet, H, Kells, P.M, Ortiz de Montellano, P.R, Podust, L.M.
Deposit date:2010-02-10
Release date:2010-11-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Reverse Type I Inhibitor of Mycobacteriumtuberculosis Cyp125A1.
Bioorg.Med.Chem.Lett., 21, 2011
4BVC
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BU of 4bvc by Molmil
Identification of small molecule inhibitors selective for apo(a) kringles KIV-7, KIV-10 and KV.
Descriptor: 3-(4-PIPERIDYL)-N-[2-(TRIFLUOROMETHOXY)PHENYL]SULFONYL-PROPANAMIDE, APOLIPOPROTEIN(A), CHLORIDE ION, ...
Authors:Sandmark, J, Althage, M, Andersson, G.M.K, Antonsson, T, Blaho, S, Bodin, C, Bostrom, J, Chen, Y, Dahlen, A, Eriksson, P.O, Evertsson, E, Fex, T, Fjellstrom, O, Gustafsson, D, Hallberg, C, Hicks, R, Jarkvist, E, Johansson, C, Kalies, I, Kang, D, Svalstedt Karlsson, B, Kartberg, F, Legnehed, A, Lindqvist, A.M, Martinsson, S.A, Moberg, A, Petersson, A.U, Ridderstrom, M, Thelin, A, Tigerstrom, A, Vinblad, J, Xu, B, Knecht, W.
Deposit date:2013-06-25
Release date:2014-07-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Small Molecules Used to Decipher the Pathophysiological Roles of the Kringle Domains Kiv-7, - 10 and Kv of Apolipoprotein(A)
To be Published
4EB1
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BU of 4eb1 by Molmil
Hyperstable in-frame insertion variant of antithrombin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antithrombin-III
Authors:Martinez-Martinez, I, Johnson, D.J.D, Yamasaki, M, Corral, J, Huntington, J.A.
Deposit date:2012-03-23
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Type II antithrombin deficiency caused by a large in-frame insertion: structural, functional and pathological relevance.
J.Thromb.Haemost., 10, 2012
4KTS
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BU of 4kts by Molmil
Bovine trypsin in complex with microviridin J at pH 8.5
Descriptor: CALCIUM ION, Cationic trypsin, DI(HYDROXYETHYL)ETHER, ...
Authors:Quitterer, F, Groll, M, Hertweck, C, Dittmann, E.
Deposit date:2013-05-21
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Harnessing the evolvability of tricyclic microviridins to dissect protease-inhibitor interactions.
Angew.Chem.Int.Ed.Engl., 53, 2014
4KDS
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BU of 4kds by Molmil
Crystal structure of latent rainbow trout plasminogen activator inhibitor 1 (PAI-1)
Descriptor: Plasminogen activator inhibitor 1, SULFATE ION
Authors:Johansen, J.S.
Deposit date:2013-04-25
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6682 Å)
Cite:Protein conformational change delayed by steric hindrance from an N-linked glycan.
J.Mol.Biol., 425, 2013
2WWN
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BU of 2wwn by Molmil
Yersinia pseudotuberculosis Superoxide Dismutase C with bound Azide
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AZIDE ION, SUPEROXIDE DISMUTASE [CU-ZN], ...
Authors:Basak, A.K, Duffield, M.L, Naylor, C.E, Huyet, J, Titball, R.W.
Deposit date:2009-10-26
Release date:2010-11-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Yersinia Pseudotuberculosis Superoxide Dismutase (Sodc)
To be Published
4C9L
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BU of 4c9l by Molmil
Structure of Cyanide and Camphor bound wild type CYP101D1
Descriptor: CAMPHOR, CYANIDE ION, CYTOCHROME P450, ...
Authors:Batabyal, D, L Poulos, T.
Deposit date:2013-10-02
Release date:2013-12-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Crystal Structures and Functional Characterization of Wild Type and Active Sites Mutants of Cyp101D1.
Biochemistry, 52, 2013
2WYZ
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BU of 2wyz by Molmil
L38V SOD1 mutant complexed with UMP
Descriptor: COPPER (II) ION, SULFATE ION, SUPEROXIDE DISMUTASE [CU-ZN], ...
Authors:Antonyuk, S.V, Strange, R.W, Hasnain, S.S.
Deposit date:2009-11-20
Release date:2010-10-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Discovery of Small Molecule Binding Sites in Cu-Zn Human Superoxide Dismutase Familial Amyotrophic Lateral Sclerosis Mutants Provides Insights for Lead Optimization.
J.Med.Chem., 53, 2010
3Q3G
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BU of 3q3g by Molmil
Crystal Structure of A-domain in complex with antibody
Descriptor: 1,2-ETHANEDIOL, Antibody Heavy chain, Antibody Light Chain, ...
Authors:Mahalingam, B, Xiong, J.P, Arnaout, M.A.
Deposit date:2010-12-21
Release date:2011-11-30
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Stable Coordination of the Inhibitory Ca2+ Ion at the Metal Ion-Dependent Adhesion Site in Integrin CD11b/CD18 by an Antibody-Derived Ligand Aspartate: Implications for Integrin Regulation and Structure-Based Drug Design.
J.Immunol., 187, 2011
4KII
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BU of 4kii by Molmil
Beta-lactoglobulin in complex with Cp*Rh(III)Cl N,N-di(pyridin-2-yl)dodecanamide
Descriptor: Beta-lactoglobulin, [N,N-di(pyridin-2-yl-kappaN)dodecanamide]rhodium
Authors:Cherrier, M.V, Amara, P, Engilberge, S, Fontecilla-Camps, J.C.
Deposit date:2013-05-02
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for Enantioselectivity in the Transfer Hydrogenation of a Ketone Catalyzed by an Artificial Metalloenzyme
Eur.J.Inorg.Chem., 21, 2013
1HV7
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BU of 1hv7 by Molmil
PORCINE PANCREATIC ELASTASE COMPLEXED WITH GW311616A
Descriptor: ELASTASE 1, N-[2-(1-FORMYL-2-METHYL-PROPYL)-1-(4-PIPERIDIN-1-YL-BUT-2-ENOYL)-PYRROLIDIN-3-YL]-METHANESULFONAMIDE, SULFATE ION
Authors:Skarzynski, T, Singh, O.M.
Deposit date:2001-01-08
Release date:2001-01-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The discovery of a potent, intracellular, orally bioavailable, long duration inhibitor of human neutrophil elastase--GW311616A a development candidate
Bioorg.Med.Chem.Lett., 11, 2001
4KV5
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BU of 4kv5 by Molmil
scFv GC1009 in complex with TGF-beta1.
Descriptor: Single-chain variable fragment GC1009, Transforming growth factor beta-1 proprotein
Authors:Wei, R, Moulin, A.G, Mathieu, M.
Deposit date:2013-05-22
Release date:2014-09-24
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of a pan-specific antagonist antibody complexed to different isoforms of TGF beta reveal structural plasticity of antibody-antigen interactions.
Protein Sci., 23, 2014
4EK1
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BU of 4ek1 by Molmil
Crystal Structure of Electron-Spin Labeled Cytochrome P450cam
Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Lee, Y.-T, Goodin, D.B.
Deposit date:2012-04-08
Release date:2012-07-25
Last modified:2012-08-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Double electron-electron resonance shows cytochrome P450cam undergoes a conformational change in solution upon binding substrate.
Proc.Natl.Acad.Sci.USA, 109, 2012
4BMM
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BU of 4bmm by Molmil
Crystal structure of Trypanosoma cruzi CYP51 bound to the inhibitor (R)-N-(3-(1H-indol-3-yl)-1-oxo-1-(pyridin-4-ylamino)propan-2-yl)-2',3, 5'-trifluoro-(1,1'-biphenyl)-4-carboxamide
Descriptor: 4-[2,5-bis(fluoranyl)phenyl]-2-fluoranyl-N-[(2R)-3-(1H-indol-3-yl)-1-oxidanylidene-1-(pyridin-4-ylamino)propan-2-yl]benzamide, PROTOPORPHYRIN IX CONTAINING FE, STEROL 14-ALPHA DEMETHYLASE
Authors:Choi, J.Y, Calvet, C.M, Gunatilleke, S.S, Roush, W.R, McKerrow, J.H, Podust, L.M.
Deposit date:2013-05-09
Release date:2014-06-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:4-Aminopyridyl-Based Cyp51 Inhibitors as Anti-Trypanosoma Cruzi Drug Leads with Improved Pharmacokinetic Profile and in Vivo Potency.
J.Med.Chem., 57, 2014
3PSK
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BU of 3psk by Molmil
Crystal Structure of the Spt6 Tandem SH2 Domain from Saccharomyces cerevisiae, Form Native Spt6 (1247-1451)
Descriptor: SULFATE ION, Transcription elongation factor SPT6
Authors:Close, D, Hill, C.P.
Deposit date:2010-12-01
Release date:2011-03-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the S. cerevisiae Spt6 core and C-terminal tandem SH2 domain.
J.Mol.Biol., 408, 2011
2YBL
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BU of 2ybl by Molmil
Nitrate X-ray induced reduction on HEWL crystals (17.9 MGy)
Descriptor: LYSOZYME C, NITRITE ION
Authors:De la Mora, E, Carmichaael, I, Garman, E.F.
Deposit date:2011-03-08
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Effective Scavenging at Cryotemperatures: Further Increasing the Dose Tolerance of Protein Crystals.
J.Synchrotron.Radiat., 18, 2011
4BV0
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BU of 4bv0 by Molmil
High Resolution Structure of Evolved Agonist-bound Neurotensin Receptor 1 Mutant without Lysozyme Fusion
Descriptor: NEUROTENSIN RECEPTOR TYPE 1, NEUROTENSIN/NEUROMEDIN N
Authors:Egloff, P, Hillenbrand, M, Scott, D.J, Schlinkmann, K.M, Heine, P, Balada, S, Batyuk, A, Mittl, P, Schuetz, M, Plueckthun, A.
Deposit date:2013-06-24
Release date:2014-01-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of Signaling-Competent Neurotensin Receptor 1 Obtained by Directed Evolution in Escherichia Coli
Proc.Natl.Acad.Sci.USA, 111, 2014
3PU7
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BU of 3pu7 by Molmil
Cu-Zn Tomato Chloroplast Superoxide Dismutase
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn], chloroplastic, ...
Authors:Galaleldeen, A, Taylor, A.B, Hart, P.J.
Deposit date:2010-12-03
Release date:2011-12-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biophysical Properties of Tomato Chloroplast SOD
To be Published
7YXW
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BU of 7yxw by Molmil
Structure of the p22phox A200G mutant in complex with p47phox peptide
Descriptor: Cytochrome b-245 light chain, Neutrophil cytosol factor 1
Authors:Cukier, C.D, Vuillard, L.M, Komjati, B, Szlavik, Z.
Deposit date:2022-02-16
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Targeting NOX2 via p47/phox-p22/phox Inhibition with Novel Triproline Mimetics
Acs Med.Chem.Lett., 13, 2022
4L1A
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BU of 4l1a by Molmil
Crystallographic study of multi-drug resistant HIV-1 protease Lopinavir complex: mechanism of drug recognition and resistance
Descriptor: MDR769 HIV-1 protease, N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE
Authors:Liu, Z, Yedidi, R.S, Wang, Y, Dewdney, T, Reiter, S, Brunzelle, J, Kovari, I, Kovari, L.
Deposit date:2013-06-03
Release date:2014-04-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic study of multi-drug resistant HIV-1 protease lopinavir complex: mechanism of drug recognition and resistance.
Biochem.Biophys.Res.Commun., 437, 2013
7Z4V
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BU of 7z4v by Molmil
Structure of Serine-Threonine kinase STK25 in complex with compound
Descriptor: 1,2-ETHANEDIOL, Serine/threonine-protein kinase 25, ~{N}-(5-~{tert}-butyl-1~{H}-pyrazol-3-yl)-4-pyrrolidin-1-ylsulfonyl-benzamide
Authors:Nawrotek, A, Vuillard, L, Miallau, L.
Deposit date:2022-03-04
Release date:2022-04-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:Targeting non-alcoholic fatty liver disease: Design, X-ray co-crystal structure and synthesis of 'first-in-kind' inhibitors of serine/threonine kinase25.
Bioorg.Med.Chem.Lett., 75, 2022
4L49
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BU of 4l49 by Molmil
Structure of L358A mutant of P450cam bound to camphor
Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Batabyal, D, Li, H, Poulos, T.L.
Deposit date:2013-06-07
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.128 Å)
Cite:Synergistic Effects of Mutations in Cytochrome P450cam Designed To Mimic CYP101D1.
Biochemistry, 52, 2013

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