Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ECZ
DownloadVisualize
BU of 3ecz by Molmil
Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [30 min]
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S.
Deposit date:2008-09-02
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin
Proc.Natl.Acad.Sci.USA, 106, 2009
3EMQ
DownloadVisualize
BU of 3emq by Molmil
Crystal structure of xilanase XynB from Paenibacillus barcelonensis complexed with an inhibitor
Descriptor: (1S,2S,3R,6R)-6-[(2-hydroxybenzyl)amino]cyclohex-4-ene-1,2,3-triol, Endo-1,4-beta-xylanase
Authors:Sanz-Aparicio, J, Isorna, P.
Deposit date:2008-09-25
Release date:2009-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structural insights into the specificity of Xyn10B from Paenibacillus barcinonensis and its improved stability by forced protein evolution.
J.Biol.Chem., 285, 2010
3EDB
DownloadVisualize
BU of 3edb by Molmil
Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser on [150 min]
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S.
Deposit date:2008-09-03
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin
Proc.Natl.Acad.Sci.USA, 106, 2009
3EN5
DownloadVisualize
BU of 3en5 by Molmil
Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP494, a multitargeted kinase inhibitor
Descriptor: 1-cyclobutyl-3-(3,4-dimethoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Proto-oncogene tyrosine-protein kinase Src
Authors:Blair, J.A, Apsel, B, Knight, Z.A, Shokat, K.M.
Deposit date:2008-09-25
Release date:2008-10-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Targeted polypharmacology: discovery of dual inhibitors of tyrosine and phosphoinositide kinases.
Nat.Chem.Biol., 4, 2008
3EDK
DownloadVisualize
BU of 3edk by Molmil
Structural base for cyclodextrin hydrolysis
Descriptor: CALCIUM ION, Cyclomaltodextrinase, Cyclooctakis-(1-4)-(alpha-D-glucopyranose), ...
Authors:Buedenbender, S, Schulz, G.E.
Deposit date:2008-09-03
Release date:2009-03-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural base for enzymatic cyclodextrin hydrolysis
J.Mol.Biol., 385, 2009
3EOP
DownloadVisualize
BU of 3eop by Molmil
Crystal Structure of the DUF55 domain of human thymocyte nuclear protein 1
Descriptor: SULFATE ION, Thymocyte nuclear protein 1
Authors:Yu, F, Song, A, Xu, C, Sun, L, Li, L, Tang, L, Hu, H, He, J.
Deposit date:2008-09-29
Release date:2009-09-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Determining the DUF55-domain structure of human thymocyte nuclear protein 1 from crystals partially twinned by tetartohedry
Acta Crystallogr.,Sect.D, 65, 2009
3EE8
DownloadVisualize
BU of 3ee8 by Molmil
Structure of NS1 effector domain
Descriptor: Non-structural protein 1
Authors:Xia, S, Monzingo, A.F, Robertus, J.D.
Deposit date:2008-09-04
Release date:2009-01-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of NS1A effector domain from the influenza A/Udorn/72 virus.
Acta Crystallogr.,Sect.D, 65, 2009
3EEE
DownloadVisualize
BU of 3eee by Molmil
Probing the function of heme distortion in the H-NOX family
Descriptor: CHLORIDE ION, Methyl-accepting chemotaxis protein, OXYGEN MOLECULE, ...
Authors:Olea Jr, C, Boon, E.M, Pellicena, P, Kuriyan, J, Marletta, M.A.
Deposit date:2008-09-04
Release date:2008-11-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Probing the function of heme distortion in the H-NOX family.
Acs Chem.Biol., 3, 2008
3EP4
DownloadVisualize
BU of 3ep4 by Molmil
Human AdoMetDC E256Q mutant with no putrescine bound
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PYRUVIC ACID, S-adenosylmethionine decarboxylase alpha chain, ...
Authors:Bale, S, Lopez, M.M, Makhatadze, G.I, Fang, Q, Pegg, A.E, Ealick, S.E.
Deposit date:2008-09-29
Release date:2008-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural Basis for Putrescine Activation of Human S-Adenosylmethionine Decarboxylase.
Biochemistry, 47, 2008
3EF9
DownloadVisualize
BU of 3ef9 by Molmil
Replacement of Val3 in Human Thymidylate Synthase Affects Its Kinetic Properties and Intracellular Stability
Descriptor: SULFATE ION, Thymidylate synthase
Authors:Huang, X, Gibson, L.M, Bell, B.J, Lovelace, L.L, Pena, M.M, Berger, F.G, Berger, S.H.
Deposit date:2008-09-08
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Replacement of Val3 in human thymidylate synthase affects its kinetic properties and intracellular stability .
Biochemistry, 49, 2010
3EPK
DownloadVisualize
BU of 3epk by Molmil
Crystallographic snapshots of eukaryotic dimethylallyltransferase acting on tRNA: Insight into tRNA recognition and reaction mechanism
Descriptor: DIMETHYLALLYL S-THIOLODIPHOSPHATE, MAGNESIUM ION, PYROPHOSPHATE, ...
Authors:Huang, R.H, Zhou, C.
Deposit date:2008-09-29
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystallographic snapshots of eukaryotic dimethylallyltransferase acting on tRNA: insight into tRNA recognition and reaction mechanism.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3ER7
DownloadVisualize
BU of 3er7 by Molmil
Crystal structure of NTF2-like protein of unknown function (YP_001812677.1) from EXIGUOBACTERIUM SP. 255-15 at 1.50 A resolution
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, uncharacterized NTF2-like protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-10-01
Release date:2008-10-14
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of NTF2-like protein of unknown function (YP_001812677.1) from EXIGUOBACTERIUM SP. 255-15 at 1.50 A resolution
To be published
3EGA
DownloadVisualize
BU of 3ega by Molmil
Crystal structure of Pellino2 FHA Domain at 1.8 Angstroms resolution
Descriptor: Protein pellino homolog 2, SULFATE ION
Authors:Ferguson, K.M, Lin, C, Schmitz, K.R.
Deposit date:2008-09-10
Release date:2008-12-23
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Pellino proteins contain a cryptic FHA domain that mediates interaction with phosphorylated IRAK1.
Structure, 16, 2008
3E31
DownloadVisualize
BU of 3e31 by Molmil
H. influenzae beta-carbonic anhydrase, variant V47A
Descriptor: Carbonic anhydrase 2, ZINC ION
Authors:Rowlett, R.S, Lee, J.
Deposit date:2008-08-05
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase .
Biochemistry, 49, 2010
3EPB
DownloadVisualize
BU of 3epb by Molmil
Human AdoMetDC E256Q mutant complexed with putrescine
Descriptor: 1,4-DIAMINOBUTANE, PYRUVIC ACID, S-adenosylmethionine decarboxylase alpha chain, ...
Authors:Bale, S, Lopez, M.M, Makhatadze, G.I, Fang, Q, Pegg, A.E, Ealick, S.E.
Deposit date:2008-09-29
Release date:2008-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Putrescine Activation of Human S-Adenosylmethionine Decarboxylase.
Biochemistry, 47, 2008
3EPP
DownloadVisualize
BU of 3epp by Molmil
Crystal structure of mRNA cap guanine-N7 methyltransferase (RNMT) in complex with sinefungin
Descriptor: SINEFUNGIN, mRNA cap guanine-N7 methyltransferase
Authors:Amaya, M.F, Zeng, H, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Botchkarev, A, Min, J, Plotnikov, A.N, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2008-09-29
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of mRNA cap guanine-N7 methyltransferase (RNMT) in complex with sinefungin.
To be Published
3E40
DownloadVisualize
BU of 3e40 by Molmil
Q138F HincII bound to GTTAAC and cocrystallized with 5 mM Ca2+
Descriptor: 5'-D(*DGP*DCP*DCP*DGP*DGP*DTP*DP*DAP*DAP*DCP*DCP*DGP*DGP*DC)-3'), CALCIUM ION, SODIUM ION, ...
Authors:Horton, N.C, Babic, A.C, Little, E.J, Manohar, V.M.
Deposit date:2008-08-08
Release date:2008-08-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:DNA distortion and specificity in a sequence-specific endonuclease.
J.Mol.Biol., 383, 2008
3E5I
DownloadVisualize
BU of 3e5i by Molmil
Carbonmonoxy Sperm Whale Myoglobin at 120 K: Laser off
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Tomita, A, Sato, T, Ichiyanagi, K, Nozawa, S, Ichikawa, H, Chollet, M, Kawai, F, Park, S.-Y, Koshihara, S, Adachi, S.
Deposit date:2008-08-14
Release date:2009-02-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin
Proc.Natl.Acad.Sci.USA, 106, 2009
3E5S
DownloadVisualize
BU of 3e5s by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L103K at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Khangulov, V.S, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2008-08-14
Release date:2008-11-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Staphylococcal nuclease variant Delta+PHS L103K at cryogenic temperature
To be Published
3E68
DownloadVisualize
BU of 3e68 by Molmil
Structure of murine INOS oxygenase domain with inhibitor AR-C130232
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, N-[2-(6-AMINO-4-METHYLPYRIDIN-2-YL)ETHYL]-4-CYANOBENZAMIDE, ...
Authors:Garcin, E.D, Arvai, A.S, Rosenfeld, R.J, Kroeger, M.D, Crane, B.R, Andersson, G, Andrews, G, Hamley, P.J, Mallinder, P.R, Nicholls, D.J, St-Gallay, S.A, Tinker, A.C, Gensmantel, N.P, Mete, A, Cheshire, D.R, Connolly, S, Stueh, D.J, Aberg, A, Wallace, A.V, Tainer, J.A, Getzoff, E.D.
Deposit date:2008-08-14
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
3ERO
DownloadVisualize
BU of 3ero by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS I72E at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Robinson, A.C, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2008-10-02
Release date:2008-11-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of D+PHS I72E at cryogenic temperature
To be Published
3E6U
DownloadVisualize
BU of 3e6u by Molmil
Crystal structure of Human LanCL1
Descriptor: LanC-like protein 1, ZINC ION
Authors:Zhang, W, Zhu, G, Li, X, Rao, Z, Zhang, C.
Deposit date:2008-08-16
Release date:2009-06-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of human lanthionine synthetase C-like protein 1 and its interaction with Eps8 and glutathione
Genes Dev., 23, 2009
3E7M
DownloadVisualize
BU of 3e7m by Molmil
Structure of murine iNOS oxygenase domain with inhibitor AR-C95791
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, ETHYL 4-[(4-METHYLPYRIDIN-2-YL)AMINO]PIPERIDINE-1-CARBOXYLATE, ...
Authors:Garcin, E.D, Arvai, A.S, Rosenfeld, R.J, Kroeger, M.D, Crane, B.R, Andersson, G, Andrews, G, Hamley, P.J, Mallinder, P.R, Nicholls, D.J, St-Gallay, S.A, Tinker, A.C, Gensmantel, N.P, Mete, A, Cheshire, D.R, Connolly, S, Stuehr, D.J, Aberg, A, Wallace, A.V, Tainer, J.A, Getzoff, E.D.
Deposit date:2008-08-18
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
3E8T
DownloadVisualize
BU of 3e8t by Molmil
Crystal Structure of Epiphyas postvittana Takeout 1
Descriptor: Takeout-like protein 1, Ubiquinone-8
Authors:Hamiaux, C, Stanley, D, Greenwood, D.R, Baker, E.N, Newcomb, R.D.
Deposit date:2008-08-20
Release date:2008-12-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of Epiphyas postvittana takeout 1 with bound ubiquinone supports a role as ligand carriers for takeout proteins in insects
J.Biol.Chem., 284, 2009
3ESW
DownloadVisualize
BU of 3esw by Molmil
Complex of yeast PNGase with GlcNAc2-IAc.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, UV excision repair protein RAD23, ...
Authors:Zhao, G, Zhou, X, Lennarz, W.J, Schindelin, H.
Deposit date:2008-10-06
Release date:2008-11-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural and mutational studies on the importance of oligosaccharide binding for the activity of yeast PNGase.
Glycobiology, 19, 2009

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon