PDB: 19260 resultsInfo pagesStatus searchChemie searchBIRD

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3EPJ	Crystallographic snapshots of eukaryotic dimethylallyltransferase acting on tRNA: Insight into tRNA recognition and reaction mechanism Descriptor: MAGNESIUM ION, ZINC ION, tRNA, ... Authors: Huang, R.H, Zhou, C. Deposit date: 2008-09-29 Release date: 2008-11-04 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Crystallographic snapshots of eukaryotic dimethylallyltransferase acting on tRNA: insight into tRNA recognition and reaction mechanism. Proc.Natl.Acad.Sci.Usa, 105, 2008
3E2A	H. influenzae beta-carbonic anhydrase, variant Y181F with 100 mM bicarbonate Descriptor: BICARBONATE ION, Carbonic anhydrase 2, SULFATE ION, ... Authors: Rowlett, R.S, Lee, J. Deposit date: 2008-08-05 Release date: 2009-06-02 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.301 Å) Cite: Allosteric site variants of Haemophilus influenzae beta-carbonic anhydrase. Biochemistry, 48, 2009
3E2X	H. influenzae beta-carbonic anhydrase, variant V47A Descriptor: Carbonic anhydrase 2, SULFATE ION, ZINC ION Authors: Rowlett, R.S, Lee, J. Deposit date: 2008-08-06 Release date: 2009-08-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Evidence for a bicarbonate "escort" site in Haemophilus influenzae beta-carbonic anhydrase . Biochemistry, 49, 2010
3EP7	Human AdoMetDC E256Q mutant complexed with S-Adenosylmethionine methyl ester and no putrescine bound Descriptor: PYRUVIC ACID, S-ADENOSYLMETHIONINE METHYL ESTER, S-adenosylmethionine decarboxylase alpha chain, ... Authors: Bale, S, Lopez, M.M, Makhatadze, G.I, Fang, Q, Pegg, A.E, Ealick, S.E. Deposit date: 2008-09-29 Release date: 2008-12-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural Basis for Putrescine Activation of Human S-Adenosylmethionine Decarboxylase. Biochemistry, 47, 2008
3DFG	Crystal Structure of RecX: A Potent Inhibitor Protein of RecA from Xanthomonas campestris Descriptor: Regulatory protein recX Authors: Yang, C.Y. Deposit date: 2008-06-12 Release date: 2008-11-04 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structure of RecX: a potent regulatory protein of RecA from Xanthomonas campestris. Proteins, 74, 2009
3DFX	Opposite GATA DNA binding Descriptor: DNA (5'-D(*DAP*DAP*DGP*DGP*DTP*DTP*DAP*DTP*DCP*DTP*DCP*DTP*DGP*DAP*DTP*DTP*DTP*DAP*DTP*DC)-3'), DNA (5'-D(*DTP*DTP*DGP*DAP*DTP*DAP*DAP*DAP*DTP*DCP*DAP*DGP*DAP*DGP*DAP*DTP*DAP*DAP*DCP*DC)-3'), Trans-acting T-cell-specific transcription factor GATA-3, ... Authors: Bates, D.L, Kim, G.K, Guo, L, Chen, L. Deposit date: 2008-06-12 Release date: 2008-07-29 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal structures of multiple GATA zinc fingers bound to DNA reveal new insights into DNA recognition and self-association by GATA. J.Mol.Biol., 381, 2008
3DG9	Crystal Structure of Malonate Decarboxylase from Bordatella bronchiseptica Descriptor: Arylmalonate decarboxylase, PHOSPHATE ION Authors: Okrasa, K, Levy, C, Baudendistel, N, Leys, D, Micklefield, J. Deposit date: 2008-06-13 Release date: 2008-08-05 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structure and Mechanism of an Unusual Malonate Decarboxylase and Related Racemases. Chemistry, 14, 2008
3DI9	Crystal structure of bovine pancreatic ribonuclease A variant (I81A) Descriptor: CHLORIDE ION, Ribonuclease pancreatic, SULFATE ION Authors: Kurpiewska, K, Font, J, Ribo, M, Vilanova, M, Lewinski, K. Deposit date: 2008-06-20 Release date: 2008-07-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2 Å) Cite: X-ray crystallographic studies of RNase A variants engineered at the most destabilizing positions of the main hydrophobic core: further insight into protein stability Proteins, 77, 2009
3DJY	Nonaged Form of Human Butyrylcholinesterase Inhibited by Tabun Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ... Authors: Carletti, E, Nachon, F. Deposit date: 2008-06-24 Release date: 2008-12-02 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Aging of Cholinesterases Phosphylated by Tabun Proceeds through O-Dealkylation. J.Am.Chem.Soc., 130, 2008
3DKF	Structure of MET receptor tyrosine kinase in complex with inhibitor SGX-523 Descriptor: 6-{[6-(1-methyl-1H-pyrazol-4-yl)[1,2,4]triazolo[4,3-b]pyridazin-3-yl]sulfanyl}quinoline, CHLORIDE ION, Hepatocyte growth factor receptor Authors: Hendle, J. Deposit date: 2008-06-24 Release date: 2009-07-07 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: SGX523 is an exquisitely selective, ATP-competitive inhibitor of the MET receptor tyrosine kinase with antitumor activity in vivo. Mol.Cancer Ther., 8, 2009
3DGM	2.4 A Structure of a Non-biological ATP binding protein with ADP bound Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP Binding Protein-DX, DI(HYDROXYETHYL)ETHER, ... Authors: Simmons, C.R, Allen, J.P, Chaput, J.C. Deposit date: 2008-06-13 Release date: 2009-06-30 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.4 Å) Cite: A Primordial ATP Binding Protein Generated from Random Sequence Origin To be Published
3DN9	Carboxysome Subunit, CcmK1 C-terminal deletion mutant Descriptor: CcmK1 C-terminal deletion mutant, SULFATE ION Authors: Tanaka, S, Sawaya, M.R, Yeates, T.O. Deposit date: 2008-07-01 Release date: 2009-01-20 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.28 Å) Cite: Insights from multiple structures of the shell proteins from the beta-carboxysome. Protein Sci., 18, 2009
3DNP	Crystal structure of Stress response protein yhaX from Bacillus subtilis Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Stress response protein yhaX Authors: Chang, C, Tesar, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2008-07-02 Release date: 2008-07-29 Last modified: 2017-10-25 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal structure of Stress response protein yhaX from Bacillus subtilis To be Published
3DO1	Thermolysin by Classical hanging drop method before high X-Ray dose on ESRF ID14-2 beamline Descriptor: CALCIUM ION, LYSINE, Thermolysin, ... Authors: Pechkova, E, Tripathi, S.K, Nicolini, C. Deposit date: 2008-07-03 Release date: 2009-07-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.33 Å) Cite: Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
3DO0	Thermolysin by classical hanging drop method after high X-Ray dose on esrf ID14-2 beamline Descriptor: CALCIUM ION, LYSINE, Thermolysin, ... Authors: Pechkova, E, Tripathi, S.K, Nicolini, C. Deposit date: 2008-07-03 Release date: 2009-07-07 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.36 Å) Cite: Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
3DOY	Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Helicobacter pylori in complex with compound 3i Descriptor: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase, 4-chloro-N'-[(1E)-(3,5-dibromo-2,4-dihydroxyphenyl)methylidene]benzohydrazide, BENZAMIDINE, ... Authors: Zhang, L, He, L, Liu, X, Liu, H, Shen, X, Jiang, H. Deposit date: 2008-07-07 Release date: 2009-05-05 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Discovering potent inhibitors against the beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Helicobacter pylori: structure-based design, synthesis, bioassay, and crystal structure determination. J.Med.Chem., 52, 2009
3DQ7	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 1: Structure 17 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.23 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DPP	Crystal structure of the substrate binding domain of E. coli DnaK in complex with a long pyrrhocoricin-derived inhibitor peptide (form A) Descriptor: Chaperone protein dnaK, SULFATE ION, inhibitor peptide Authors: Roujeinikova, A. Deposit date: 2008-07-09 Release date: 2009-03-10 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Allosteric coupling between the lid and interdomain linker in DnaK revealed by inhibitor binding studies. J.Bacteriol., 191, 2009
3DQK	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 2: Structure 6 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DPZ	Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 3: Structure 25 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQZ	Structure of the hydroxynitrile lyase from Arabidopsis thaliana Descriptor: Alpha-hydroxynitrile lyase-like protein, CHLORIDE ION Authors: Andexer, J, Staunig, N, Gruber, K. Deposit date: 2008-07-10 Release date: 2009-07-14 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.504 Å) Cite: Hydroxynitrile lyases with alpha / beta-hydrolase fold: two enzymes with almost identical 3D structures but opposite enantioselectivities and different reaction mechanisms Chembiochem, 13, 2012
3DQ8	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1500 Atmospheres Number 2: Structure 16 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DVJ	Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain (without cloning artifact, HM to TV) complex Descriptor: CALCIUM ION, Calmodulin, Voltage-dependent N-type calcium channel subunit alpha-1B Authors: Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L. Deposit date: 2008-07-18 Release date: 2008-11-04 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation. Structure, 16, 2008
3DVR	Proteinase K by LB nanotemplate method after the first step of high X-Ray dose on ESRF ID14-2 beamline Descriptor: CALCIUM ION, Proteinase K Authors: Pechkova, E, Tripathi, S.K, Nicolini, C. Deposit date: 2008-07-20 Release date: 2009-07-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.02 Å) Cite: Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
3DW7	Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2656-SeCH3 modified Descriptor: Sarcin/Ricin Domain from E. Coli 23 S rRNA Authors: Olieric, V, Rieder, U, Lang, K, Serganov, A, Schulze-Briese, C, Micura, R, Dumas, P, Ennifar, E. Deposit date: 2008-07-21 Release date: 2009-03-24 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1 Å) Cite: A fast selenium derivatization strategy for crystallization and phasing of RNA structures. Rna, 15, 2009

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