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8OLW
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BU of 8olw by Molmil
Structure of Oceanobacillus iheyensis group II intron before the first step of splicing in the presence of K+, Ca2+ and intronistat B
Descriptor: CALCIUM ION, Group IIC intron, POTASSIUM ION
Authors:Silvestri, I, Marcia, M.
Deposit date:2023-03-30
Release date:2024-06-19
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (4 Å)
Cite:Targeting the conserved active site of splicing machines with specific and selective small molecule modulators.
Nat Commun, 15, 2024
6M7K
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BU of 6m7k by Molmil
Structure of mouse RECON (AKR1C13) in complex with cyclic AMP-AMP-GMP (cAAG)
Descriptor: 1,2-ETHANEDIOL, Aldo-keto reductase family 1 member C13, cyclic AMP-AMP-GMP
Authors:Eaglesham, J.B, Whiteley, A.T, de Oliveira Mann, C.C, Morehouse, B.R, Nieminen, E.A, King, D.S, Lee, A.S.Y, Mekalanos, J.J, Kranzusch, P.J.
Deposit date:2018-08-20
Release date:2019-02-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Bacterial cGAS-like enzymes synthesize diverse nucleotide signals.
Nature, 567, 2019
7SQN
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BU of 7sqn by Molmil
Structure of the E. coli PutA proline dehydrogenase domain (residues 86-630) complexed with (2S)-oxetane-2-carboxylic acid
Descriptor: (2S)-oxetane-2-carboxylic acid, Bifunctional protein PutA, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Tanner, J.J, Bogner, A.N.
Deposit date:2021-11-05
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure-affinity relationships of reversible proline analog inhibitors targeting proline dehydrogenase.
Org.Biomol.Chem., 20, 2022
7N55
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BU of 7n55 by Molmil
The crystal structure of the mutant I38T PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988514
Descriptor: 5-hydroxy-N-[2-(2-methoxypyridin-4-yl)ethyl]-2-(2-methylphenyl)-6-oxo-1,6-dihydropyrimidine-4-carboxamide, Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, ...
Authors:Cuypers, M.G, Slavish, J.P, Rankovic, Z, White, S.W.
Deposit date:2021-06-04
Release date:2022-06-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023
5AQL
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BU of 5aql by Molmil
Fragment-based screening of HSP70 sheds light on the functional role of ATP-binding site residues
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BAG FAMILY MOLECULAR CHAPERONE REGULATOR 1, GLYCEROL, ...
Authors:Jones, A.M, Westwood, I.M, Osborne, J.D, Matthews, T.P, Cheeseman, M.D, Rowlands, M.G, Jeganathan, F, Burke, R, Lee, D, Kadi, N, Liu, M, Richards, M, McAndrew, C, Yahya, N, Dobson, S.E, Jones, K, Workman, P, Collins, I, van Montfort, R.L.M.
Deposit date:2015-09-22
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:A fragment-based approach applied to a highly flexible target: Insights and challenges towards the inhibition of HSP70 isoforms.
Sci Rep, 6, 2016
8P48
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BU of 8p48 by Molmil
IPNS variant N252D in complex with Fe and ACV under anaerobic conditions
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Schofield, C.J.
Deposit date:2023-05-19
Release date:2024-06-05
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:IPNS variant N252D in complex with Fe and ACV under anaerobic conditions
To Be Published
8P8Z
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BU of 8p8z by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 1963
Descriptor: 3-[3-cyano-4-(methylsulfonylmethyl)phenyl]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-04
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 1963
To Be Published
6AM7
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BU of 6am7 by Molmil
Engineered tryptophan synthase b-subunit from Pyrococcus furiosus, PfTrpB2B9
Descriptor: PHOSPHATE ION, SODIUM ION, Tryptophan synthase beta chain 1
Authors:Buller, A.R, van Roye, P.
Deposit date:2017-08-09
Release date:2018-05-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Directed Evolution Mimics Allosteric Activation by Stepwise Tuning of the Conformational Ensemble.
J. Am. Chem. Soc., 140, 2018
8C1Y
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BU of 8c1y by Molmil
Small molecule stabilizer for 14-3-3/ChREBP (Cmd 30)
Descriptor: 14-3-3 protein sigma, Carbohydrate-responsive element-binding protein, [2-[2-[[2,2-bis(fluoranyl)-2-phenyl-ethyl]amino]-2-oxidanylidene-ethoxy]phenyl]phosphonic acid
Authors:Pennings, M.A.M, Visser, E.J, Ottmann, C.
Deposit date:2022-12-21
Release date:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular glues of the regulatory ChREBP/14-3-3 complex protect beta cells from glucolipotoxicity.
Biorxiv, 2024
6M8O
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BU of 6m8o by Molmil
Crystal structure of the receiver domain of LytR from Staphylococcus aureus
Descriptor: DNA-binding response regulator, SULFATE ION
Authors:Shala-Lawrence, A, Audette, G.F.
Deposit date:2018-08-22
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the receiver domain of LytR from Staphylococcus aureus
To Be Published
8CHA
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BU of 8cha by Molmil
Fc gamma RIIa 27W/131H variant ectodomain
Descriptor: 1,2-DIMETHOXYETHANE, 2-[2-(2-ethoxyethoxy)ethoxy]ethanol, 3,6,9,12,15,18-HEXAOXAICOSANE, ...
Authors:Foy, E.G, Thomsen, M, Goldman, A, Robinson, J.I.
Deposit date:2023-02-07
Release date:2024-05-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Fc gamma RIIa 27W/131H variant ectodomain
To Be Published
8PA3
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BU of 8pa3 by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2500
Descriptor: 7-[(1~{S})-1-[4-(2-azanylethyl)phenoxy]ethyl]-3-[3-chloranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-07
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2500
To Be Published
7N4F
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BU of 7n4f by Molmil
Ni-bound crystal structure of the engineered cyt cb562 variant, AB2-H100A, crystallized in the presence of Ni(II)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-06-04
Release date:2022-06-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
8CBC
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BU of 8cbc by Molmil
Crystal structure of Thermothelomyces thermophila GH30 (double mutant EE) in complex with xylotriose.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Dimarogona, M, Pentari, C, Kosinas, C, Topakas, E.
Deposit date:2023-01-25
Release date:2024-05-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and molecular insights into a bifunctional glycoside hydrolase 30 xylanase specific to glucuronoxylan.
Biotechnol.Bioeng., 121, 2024
7N4G
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BU of 7n4g by Molmil
Co-bound crystal structure of the engineered cyt cb562 variant, AB2-H100A, crystallized in the presence of Co(II)
Descriptor: COBALT (II) ION, HEME C, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-06-04
Release date:2022-06-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
8BZH
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BU of 8bzh by Molmil
FC-NAc stabilizer of 14-3-3 and ERalpha
Descriptor: 14-3-3 protein sigma, ERalpha peptide, MAGNESIUM ION, ...
Authors:Visser, E.J, Ottmann, C.
Deposit date:2022-12-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Stabilization of the Estrogen receptor alpha - 14-3-3 interaction as a potential intervention strategy for endocrine resistance in breast cancer
To Be Published
7T8W
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BU of 7t8w by Molmil
Structure of antibody 3G12 bound to Respiratory Syncytial Virus G central conserved domain mutant S177Q
Descriptor: 3G12 Fab Heavy chain, 3G12 Fab Light chain, Mature secreted glycoprotein G
Authors:Nunez Castrejon, A.M, O'Rourke, S.M, Kauvar, L.M, DuBois, R.M.
Deposit date:2021-12-17
Release date:2022-02-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-Based Design and Antigenic Validation of Respiratory Syncytial Virus G Immunogens.
J.Virol., 96, 2022
8P93
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BU of 8p93 by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2163
Descriptor: 3-[3-fluoranyl-4-[(piperidin-4-ylsulfonylamino)methyl]phenyl]-7-propan-2-yl-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-05
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2163
To Be Published
6U8D
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BU of 6u8d by Molmil
Crystal structure of hepatitis C virus IRES junction IIIabc in complex with Fab HCV2
Descriptor: Heavy chain of Fab HCV2, JIIIabc RNA (68-MER), Light chain of Fab HCV2
Authors:Koirala, D, Lewicka, A, Koldobskaya, Y, Huang, H, Piccirilli, J.A.
Deposit date:2019-09-04
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.807 Å)
Cite:Synthetic Antibody Binding to a Preorganized RNA Domain of Hepatitis C Virus Internal Ribosome Entry Site Inhibits Translation.
Acs Chem.Biol., 15, 2020
7N68
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BU of 7n68 by Molmil
The crystal structure of wild type PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988288
Descriptor: Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, Polymerase acidic protein,Polymerase acidic protein, ...
Authors:Cuypers, M.G, Slavish, J.P, Rankovic, Z, White, S.W.
Deposit date:2021-06-07
Release date:2022-06-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023
8C48
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BU of 8c48 by Molmil
Crystal structure of Thermothelomyces thermophila GH30 (double mutant EE) in complex with xylopentaose
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FLUORIDE ION, ...
Authors:Dimarogona, M, Pentari, C, Kosinas, C, Topakas, E.
Deposit date:2023-01-03
Release date:2024-05-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and molecular insights into a bifunctional glycoside hydrolase 30 xylanase specific to glucuronoxylan.
Biotechnol.Bioeng., 121, 2024
6A8Q
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BU of 6a8q by Molmil
R207A mutant of highly active EfBSH
Descriptor: Bile salt hydrolase
Authors:Ramasamy, S, Yadav, Y.
Deposit date:2018-07-10
Release date:2019-07-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:R207A mutant of highly active EfBSH
To Be Published
8P9Q
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BU of 8p9q by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2455
Descriptor: 7-[(1~{S})-1-acetyloxyethyl]-3-[3-fluoranyl-4-(sulfamoylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, DIMETHYL SULFOXIDE, ...
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-06
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2455
To Be Published
8PAA
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BU of 8paa by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2552
Descriptor: 7-[(1~{S})-1-[4-[[1,3-bis(oxidanylidene)isoindol-2-yl]methyl]phenyl]carbonyloxyethyl]-3-[6-(morpholin-4-ylmethyl)pyridin-3-yl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-07
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2552
To Be Published
7N8F
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BU of 7n8f by Molmil
The crystal structure of I38T mutant PA endonuclease (2009/H1N1/CALIFORNIA) in complex with SJ000988288
Descriptor: Hexa Vinylpyrrolidone K15, MANGANESE (II) ION, Polymerase acidic protein, ...
Authors:Cuypers, M.G, Slavish, J.P, Rankovic, Z, White, S.W.
Deposit date:2021-06-14
Release date:2022-06-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential.
Eur.J.Med.Chem., 247, 2023

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