PDB: 46984 resultsInfo pagesStatus searchChemie searchBIRD

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7M4Z	A. baumannii Ribosome-Eravacycline complex: hpf-bound 70S Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ... Authors: Morgan, C.E, Yu, E.W. Deposit date: 2021-03-22 Release date: 2021-05-19 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (2.92 Å) Cite: Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii. Mbio, 12, 2021
7LS2	80S ribosome from mouse bound to eEF2 (Class I) Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... Authors: Loerch, S, Smith, P.R, Kunder, N, Stanowick, A.D, Lou, T.-F, Campbell, Z.T. Deposit date: 2021-02-17 Release date: 2021-11-03 Last modified: 2021-12-08 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance. Nat Commun, 12, 2021
7LS1	80S ribosome from mouse bound to eEF2 (Class II) Descriptor: 28S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Loerch, S, Smith, P.R, Kunder, N, Stanowick, A.D, Lou, T.-F, Campbell, Z.T. Deposit date: 2021-02-17 Release date: 2021-11-03 Last modified: 2021-12-08 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Functionally distinct roles for eEF2K in the control of ribosome availability and p-body abundance. Nat Commun, 12, 2021
7UX2	cryo-EM structure of the Raptor-TFEB-Rag-Ragulator complex Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Cui, Z, Hurley, J. Deposit date: 2022-05-04 Release date: 2022-11-30 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structure of the lysosomal mTORC1-TFEB-Rag-Ragulator megacomplex. Nature, 614, 2023
7LZP	LC/A-JPU-B9-JPU-A11-JPU-G11 Descriptor: Botulinum neurotoxin A light chain, JPU-A11, JPU-B9, ... Authors: Lam, K, Jin, R. Deposit date: 2021-03-10 Release date: 2021-12-22 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.86 Å) Cite: Probing the structure and function of the protease domain of botulinum neurotoxins using single-domain antibodies. Plos Pathog., 18, 2022
7LUJ	Burkholderia pseudomallei Disulfide bond forming protein A (DsbA) liganded with fragment 4-methoxy-N-phenylbenzenesulfonamide Descriptor: 4-methoxy-~{N}-phenyl-benzenesulfonamide, SULFATE ION, Thiol:disulfide interchange protein Authors: Petit, G.A, Martin, J.L, McMahon, R.M. Deposit date: 2021-02-22 Release date: 2022-01-05 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Identification and characterization of two drug-like fragments that bind to the same cryptic binding pocket of Burkholderia pseudomallei DsbA. Acta Crystallogr D Struct Biol, 78, 2022
7UG6	Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922 Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Yelland, J.N, Bravo, J.P.K, Black, J.J.B, Taylor, D.W, Johnson, A.W. Deposit date: 2022-03-24 Release date: 2022-12-21 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: A single 2'-O-methylation of ribosomal RNA gates assembly of a functional ribosome. Nat.Struct.Mol.Biol., 30, 2023
7MT3	Mtb 70S with P/E tRNA Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Cui, Z, Zhang, J. Deposit date: 2021-05-12 Release date: 2022-02-02 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Interplay between an ATP-binding cassette F protein and the ribosome from Mycobacterium tuberculosis. Nat Commun, 13, 2022
8T0M	Proteasome 20S core particle from Pre1-1 Pre4-1 Double mutant Descriptor: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ... Authors: Walsh Jr, R.M, Rawson, S, Schnell, H, Velez, B, Hanna, J. Deposit date: 2023-06-01 Release date: 2023-09-06 Last modified: 2023-10-25 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Structure of the preholoproteasome reveals late steps in proteasome core particle biogenesis. Nat.Struct.Mol.Biol., 30, 2023
8T08	Preholo-Proteasome from Pre1-1 Pre4-1 Double Mutant Descriptor: Proteasome assembly chaperone 2, Proteasome chaperone 1, Proteasome maturation factor UMP1, ... Authors: Walsh Jr, R.M, Rawson, S, Schnell, H, Velez, B, Hanna, J. Deposit date: 2023-05-31 Release date: 2023-09-06 Last modified: 2023-10-25 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structure of the preholoproteasome reveals late steps in proteasome core particle biogenesis. Nat.Struct.Mol.Biol., 30, 2023
2MSD	NMR data-driven model of GTPase KRas-GNP tethered to a lipid-bilayer nanodisc Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Apolipoprotein A-I, GTPase KRas, ... Authors: Mazhab-Jafari, M, Stathopoulos, P, Marshall, C, Ikura, M. Deposit date: 2014-07-29 Release date: 2015-06-03 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Oncogenic and RASopathy-associated K-RAS mutations relieve membrane-dependent occlusion of the effector-binding site. Proc.Natl.Acad.Sci.USA, 112, 2015
7TKK	Yeast ATP synthase State 2catalytic(e) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.3 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKR	Yeast ATP synthase State 3catalytic(d) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (6.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKG	Yeast ATP synthase State 2catalytic(a) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
2MP0	Protein Phosphorylation upon a Fleeting Encounter Descriptor: Glucose-specific phosphotransferase enzyme IIA component, PHOSPHITE ION, Phosphoenolpyruvate-protein phosphotransferase Authors: Xing, Q, Yang, J, Huang, P, Zhang, W, Tang, C. Deposit date: 2014-05-08 Release date: 2014-08-20 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Visualizing an ultra-weak protein-protein interaction in phosphorylation signaling. Angew.Chem.Int.Ed.Engl., 53, 2014
8T4S	MERS-CoV Nsp1 protein bound to the Human 40S Ribosomal subunit Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Devarkar, S.C, Xiong, Y. Deposit date: 2023-06-09 Release date: 2023-10-04 Last modified: 2023-10-11 Method: ELECTRON MICROSCOPY (2.6 Å) Cite: Structural basis for translation inhibition by MERS-CoV Nsp1 reveals a conserved mechanism for betacoronaviruses. Cell Rep, 42, 2023
7TKQ	Yeast ATP synthase State 3catalytic(c) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKJ	Yeast ATP synthase State 2catalytic(d) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKS	Yeast ATP synthase State 3catalytic(e) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.5 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7M4X	A. baumannii Ribosome-Eravacycline complex: P-site tRNA 70S Descriptor: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ... Authors: Morgan, C.E, Yu, E.W. Deposit date: 2021-03-22 Release date: 2021-05-19 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (2.66 Å) Cite: Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii. Mbio, 12, 2021
7TKL	Yeast ATP synthase State 3binding(a) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (6.4 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7M4V	A. baumannii Ribosome-Eravacycline complex: 50S Descriptor: 23s ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... Authors: Morgan, C.E, Yu, E.W. Deposit date: 2021-03-22 Release date: 2021-05-19 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (2.54 Å) Cite: Cryo-EM Determination of Eravacycline-Bound Structures of the Ribosome and the Multidrug Efflux Pump AdeJ of Acinetobacter baumannii. Mbio, 12, 2021
7TKO	Yeast ATP synthase State 3catalytic(a) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKN	Yeast ATP synthase State 3binding(c) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.1 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022
7TKF	Yeast ATP synthase State 2binding(b) with 10 mM ATP backbone model Descriptor: ATP synthase protein 8, ATP synthase subunit 4, ATP synthase subunit 5, ... Authors: Guo, H, Rubinstein, J.L. Deposit date: 2022-01-17 Release date: 2022-05-11 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (7.1 Å) Cite: Structure of ATP synthase under strain during catalysis. Nat Commun, 13, 2022

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