Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4XVI
DownloadVisualize
BU of 4xvi by Molmil
Binary complex of human polymerase nu and DNA with the finger domain ajar
Descriptor: DNA (5'-D(*AP*CP*TP*CP*TP*GP*AP*CP*GP*CP*TP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*AP*GP*CP*GP*TP*CP*AP*G)-3'), DNA polymerase nu
Authors:Lee, Y.-S, Yang, W.
Deposit date:2015-01-27
Release date:2015-03-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis.
Nat.Struct.Mol.Biol., 22, 2015
4XVK
DownloadVisualize
BU of 4xvk by Molmil
Binary complex of human polymerase nu and DNA with the finger domain closed
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*GP*AP*TP*CP*TP*GP*AP*CP*GP*CP*TP*AP*CP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*GP*TP*AP*GP*CP*GP*TP*CP*A)-3'), ...
Authors:Lee, Y.-S, Yang, W.
Deposit date:2015-01-27
Release date:2015-03-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis.
Nat.Struct.Mol.Biol., 22, 2015
2MQ6
DownloadVisualize
BU of 2mq6 by Molmil
Solution structure of Y125F mutant of eRF1 N-domain
Descriptor: Eukaryotic peptide chain release factor subunit 1
Authors:Pillay, S, Li, Y, Wong, L, Pervushin, K.
Deposit date:2014-06-12
Release date:2015-06-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights of eRF1 mutants and their correlation with stop codon recognition
To be Published
4XVL
DownloadVisualize
BU of 4xvl by Molmil
Binary complex of human polymerase nu and DNA with the finger domain open
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*GP*AP*TP*CP*TP*GP*AP*CP*GP*CP*TP*AP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*TP*AP*GP*CP*GP*TP*CP*A)-3'), ...
Authors:Lee, Y.-S, Yang, W.
Deposit date:2015-01-27
Release date:2015-03-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.301 Å)
Cite:How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis.
Nat.Struct.Mol.Biol., 22, 2015
2MQ9
DownloadVisualize
BU of 2mq9 by Molmil
Solution structure of E55Q mutant of eRF1 N-domain
Descriptor: Eukaryotic peptide chain release factor subunit 1
Authors:Pillay, S, Li, Y, Wong, L, Pervushin, K.
Deposit date:2014-06-13
Release date:2015-07-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights of eRF1 mutants and their correlation with stop codon recognition
To be Published
4X0Q
DownloadVisualize
BU of 4x0q by Molmil
Ternary complex of human DNA polymerase theta C-terminal domain binding ddGTP opposite dCMP
Descriptor: 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*CP*GP*TP*CP*CP*AP*AP*TP*GP*AP*CP*AP*G)-3'), DNA (5'-D(P*CP*TP*GP*TP*CP*AP*TP*TP*G)-3'), ...
Authors:Zahn, K.E, Doublie, S.
Deposit date:2014-11-22
Release date:2015-03-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Human DNA polymerase theta grasps the primer terminus to mediate DNA repair.
Nat.Struct.Mol.Biol., 22, 2015
4X0P
DownloadVisualize
BU of 4x0p by Molmil
Ternary complex of human DNA polymerase theta C-terminal domain binding ddATP opposite a tetrahydrofuran AP site analog
Descriptor: 2',3'-dideoxyadenosine triphosphate, CALCIUM ION, DNA (5'-D(*CP*GP*TP*TP*GP*AP*AP*TP*GP*AP*CP*AP*GP*CP*CP*GP*CP*G)-3'), ...
Authors:Zahn, K.E, Doublie, S.
Deposit date:2014-11-21
Release date:2015-03-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.911 Å)
Cite:Human DNA polymerase theta grasps the primer terminus to mediate DNA repair.
Nat.Struct.Mol.Biol., 22, 2015
4C0Z
DownloadVisualize
BU of 4c0z by Molmil
The N-terminal domain of the Streptococcus pyogenes pilus tip adhesin Cpa
Descriptor: ANCILLARY PROTEIN 2, CHLORIDE ION, GLYCEROL, ...
Authors:Linke-Winnebeck, C, Paterson, N, Baker, E.N.
Deposit date:2013-08-08
Release date:2013-11-20
Last modified:2014-01-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Model for the Covalent Adhesion of the Streptococcus Pyogenes Pilus Through a Thioester Bond.
J.Biol.Chem., 289, 2014
1KMR
DownloadVisualize
BU of 1kmr by Molmil
Solution NMR Structure of Surfactant Protein B (11-25) (SP-B11-25)
Descriptor: PULMONARY SURFACTANT-ASSOCIATED PROTEIN B
Authors:Kurutz, J.W, Lee, K.Y.C.
Deposit date:2001-12-17
Release date:2002-08-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of lung surfactant peptide SP-B(11-25).
Biochemistry, 41, 2002
2VG6
DownloadVisualize
BU of 2vg6 by Molmil
Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors
Descriptor: O-[2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethyl] (4-bromophenyl)thiocarbamate, P51 RT, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
Authors:Spallarossa, A, Cesarini, S, Ranise, A, Ponassi, M, Unge, T, Bolognesi, M.
Deposit date:2007-11-08
Release date:2007-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal Structures of HIV-1 Reverse Transcriptase Complexes with Thiocarbamate Non-Nucleoside Inhibitors.
Biochem.Biophys.Res.Commun., 365, 2008
4MHG
DownloadVisualize
BU of 4mhg by Molmil
Crystal structure of ETV6 bound to a specific DNA sequence
Descriptor: Complementary Specific 14 bp DNA, Specific 14 bp DNA, Transcription factor ETV6
Authors:Chan, A.C, De, S, Coyne III, H.J, Okon, M, Murphy, M.E, Graves, B.J, McIntosh, L.P.
Deposit date:2013-08-29
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Steric Mechanism of Auto-Inhibitory Regulation of Specific and Non-Specific DNA Binding by the ETS Transcriptional Repressor ETV6.
J.Mol.Biol., 426, 2014
2VG5
DownloadVisualize
BU of 2vg5 by Molmil
Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors
Descriptor: O-[2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethyl] (4-chlorophenyl)thiocarbamate, P51 RT, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
Authors:Spallarossa, A, Cesarini, S, Ranise, A, Ponassi, M, Unge, T, Bolognesi, M.
Deposit date:2007-11-08
Release date:2007-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structures of HIV-1 Reverse Transcriptase Complexes with Thiocarbamate Non-Nucleoside Inhibitors.
Biochem.Biophys.Res.Commun., 365, 2008
2D1K
DownloadVisualize
BU of 2d1k by Molmil
Ternary complex of the WH2 domain of mim with actin-dnase I
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Chereau, D, Kerff, F, Dominguez, R.
Deposit date:2005-08-26
Release date:2006-09-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the actin-binding function of missing-in-metastasis
Structure, 15, 2007
5AZT
DownloadVisualize
BU of 5azt by Molmil
Ternary complex of hPPARalpha ligand binding domain, 17-oxoDHA and a SRC1 peptide
Descriptor: (4~{Z},7~{Z},10~{Z},13~{Z},19~{Z})-17-oxidanylidenedocosa-4,7,10,13,19-pentaenoic acid, 15-meric peptide from Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor alpha
Authors:Egawa, D, Itoh, T, Yamamoto, K.
Deposit date:2015-10-23
Release date:2016-07-06
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:17-OxoDHA Is a PPAR alpha/gamma Dual Covalent Modifier and Agonist
Acs Chem.Biol., 2016
2KRB
DownloadVisualize
BU of 2krb by Molmil
Solution structure of EIF3B-RRM bound to EIF3J peptide
Descriptor: Eukaryotic translation initiation factor 3 subunit B, Eukaryotic translation initiation factor 3 subunit J
Authors:Elantak, L, Wagner, S, Herrmannova, A, Janoskova, M, Rutkai, E, Lukavsky, P.J, Valasek, L.
Deposit date:2009-12-16
Release date:2010-01-05
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The indispensable N-terminal half of eIF3j/HCR1 co-operates with its structurally conserved binding partner eIF3b/PRT1-RRM and eIF1A in stringent AUG selection
To be Published
1LTL
DownloadVisualize
BU of 1ltl by Molmil
THE DODECAMER STRUCTURE OF MCM FROM ARCHAEAL M. THERMOAUTOTROPHICUM
Descriptor: DNA replication initiator (Cdc21/Cdc54), ZINC ION
Authors:Fletcher, R.J, Bishop, B.E, Leon, R.P, Sclafani, R.A, Ogata, C.M, Chen, X.S.
Deposit date:2002-05-20
Release date:2003-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Structure and function of MCM from archaeal M. Thermoautotrophicum
Nat.Struct.Biol., 10, 2003
5VSA
DownloadVisualize
BU of 5vsa by Molmil
Crystal structure of SsoPox AsA1 mutant (C258L-I261F-W263A)
Descriptor: Aryldialkylphosphatase, COBALT (II) ION, FE (II) ION, ...
Authors:Hiblot, J, Gotthard, G, Jacquet, P, Daude, D, Bergonzi, C, Chabriere, E, Elias, M.
Deposit date:2017-05-11
Release date:2018-01-10
Last modified:2021-08-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase.
Sci Rep, 7, 2017
2VG7
DownloadVisualize
BU of 2vg7 by Molmil
Crystal structures of HIV-1 reverse transcriptase complexes with thiocarbamate non-nucleoside inhibitors
Descriptor: O-[2-(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethyl] (4-iodophenyl)thiocarbamate, P51 RT, REVERSE TRANSCRIPTASE/RIBONUCLEASE H
Authors:Spallarossa, A, Cesarini, S, Ranise, A, Ponassi, M, Unge, T, Bolognesi, M.
Deposit date:2007-11-08
Release date:2007-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Crystal Structures of HIV-1 Reverse Transcriptase Complexes with Thiocarbamate Non-Nucleoside Inhibitors.
Biochem.Biophys.Res.Commun., 365, 2008
3DG9
DownloadVisualize
BU of 3dg9 by Molmil
Crystal Structure of Malonate Decarboxylase from Bordatella bronchiseptica
Descriptor: Arylmalonate decarboxylase, PHOSPHATE ION
Authors:Okrasa, K, Levy, C, Baudendistel, N, Leys, D, Micklefield, J.
Deposit date:2008-06-13
Release date:2008-08-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and Mechanism of an Unusual Malonate Decarboxylase and Related Racemases.
Chemistry, 14, 2008
1GY3
DownloadVisualize
BU of 1gy3 by Molmil
pCDK2/cyclin A in complex with MgADP, nitrate and peptide substrate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CELL DIVISION PROTEIN KINASE 2, CYCLIN A2, ...
Authors:Cook, A, Lowe, E.D, Chrysina, E.D, Skamnaki, V.T, Oikonomakos, N.G, Johnson, L.N.
Deposit date:2002-04-19
Release date:2002-04-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Studies on Phospho-Cdk2/Cyclin a Bound to Nitrate, a Transition State Analogue: Implications for the Protein Kinase Mechanism
Biochemistry, 41, 2002
3GBL
DownloadVisualize
BU of 3gbl by Molmil
Crystal structure of grass carp Beta2-microglobulin
Descriptor: Beta2-microglobulin
Authors:Chen, W, Gao, F, Xia, C, Gao, G.F.
Deposit date:2009-02-20
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of grass carp Beta2-microglobulin
To be Published
3H82
DownloadVisualize
BU of 3h82 by Molmil
Crystal structure of the high affinity heterodimer of HIF2 alpha and ARNT C-terminal PAS domains with the artificial ligand THS020
Descriptor: Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1, N-(furan-2-ylmethyl)-2-nitro-4-(trifluoromethyl)aniline
Authors:Key, J.M, Scheuermann, T.H, Anderson, P.C, Daggett, V, Gardner, K.H.
Deposit date:2009-04-28
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Principles of ligand binding within a completely buried cavity in HIF2alpha PAS-B
J.Am.Chem.Soc., 131, 2009
2H0K
DownloadVisualize
BU of 2h0k by Molmil
Crystal Structure of a Mutant of Rat Annexin A5
Descriptor: Annexin A5, CALCIUM ION
Authors:Granier, T, Langlois D'Estaintot, B, Gallois, B, Tessier, B, Brisson, A.
Deposit date:2006-05-15
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Annexin-A5 assembled into two-dimensional arrays promotes cell membrane repair.
Nat Commun, 2, 2011
6SA0
DownloadVisualize
BU of 6sa0 by Molmil
Ternary complex of Prim-PolC from Mycobacterium smegmatis with 2nt gapped DNA and UpNHpp
Descriptor: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, CACODYLATE ION, ...
Authors:Brissett, N.C, Doherty, A.J.
Deposit date:2019-07-15
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.209 Å)
Cite:Molecular basis for DNA repair synthesis on short gaps by mycobacterial Primase-Polymerase C.
Nat Commun, 11, 2020
1NF7
DownloadVisualize
BU of 1nf7 by Molmil
Ternary complex of the human type II Inosine Monophosphate Dedhydrogenase with Ribavirin Monophosphate and C2-Mycophenolic Adenine Dinucleotide
Descriptor: Inosine-5'-monophosphate dehydrogenase 2, POTASSIUM ION, RIBAVIRIN MONOPHOSPHATE, ...
Authors:Risal, D, Strickler, M.D, Goldstein, B.M.
Deposit date:2002-12-13
Release date:2004-01-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of Human Inosine Monophosphate Dehydrogenase type II complexed with the MPA/NAD analog C2-MAD
To be Published

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon